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Development of the nucleoside analogs to harmonize with in vivo molecular function

Research Project

Project/Area Number 20790013
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field Chemical pharmacy
Research InstitutionKyushu University

Principal Investigator

TANIGUCHI Yosuke  Kyushu University, 大学院・薬学研究院, 助教 (00452714)

Project Period (FY) 2008 – 2009
Project Status Completed (Fiscal Year 2009)
Budget Amount *help
¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2009: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Fiscal Year 2008: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Keywords3本鎖DNA / W字型人工核酸 / アンチジーン / ミスマッチサイト / 機能性人工核酸 / 分子認識 / 機能融合 / W-字型人工核酸
Research Abstract

In this study, we designed and synthesized the nucleoside analogs which interact with duplex DNA. Moreover, we aimed to establish the basic technology of the regulation of the gene expression using these nucleoside analogs. We have found that oligonucleotide containing the nucleoside analogs formed the stable triplex DNA as a result of interaction between the nucleoside analogs and duplex DNA. And this oligonucleotide inhibited the gene expression in the cultured cell.

Report

(3 results)
  • 2009 Annual Research Report   Final Research Report ( PDF )
  • 2008 Annual Research Report
  • Research Products

    (56 results)

All 2010 2009 2008 Other

All Journal Article (17 results) (of which Peer Reviewed: 10 results) Presentation (36 results) Remarks (3 results)

  • [Journal Article] A New Usage of Functionalized Oligodeoxynucleotide Probe for Site-Suecific Modification of a Guanine Base within RNA2010

    • Author(s)
      Kazumitsu Onizuka
    • Journal Title

      Nucleic Acids Res 38

      Pages: 1760-1766

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The Alkyl-Connected 2-Amino-6-Vinylprine (AVP) Crosslinking Agent for Improved Selectivity to the Cytosine Base in RNA2010

    • Author(s)
      Yosuke Taniguchi
    • Journal Title

      Bioorganic & Medicinal Chemistry (In press)

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Recognition of the CG interrupting site by W-shaped nucleoside analogs (WNA) having the pyrozole ring in an anti-parallel triplex DNA2009

    • Author(s)
      Yosuke Taniguchi, Yuko Uchida, Tomoko Takaki, Eriko Aoki, Shigeki Sasaki
    • Journal Title

      Bioorg Med. Chem. 17

      Pages: 6803-6810

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Selective fluorescence quenching of the 8-oxoG-clamp by 8-oxodeo xyguanosine in ODN2009

    • Author(s)
      Tamer Nasr, et sl.
    • Journal Title

      Bioorg. Med.Chem.Lett. 19

      Pages: 727-730

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Site-Specific Covalent Modification of Nucleic Acids Guided by Functionalitv-Transfer Oligodeoxynucleotides2009

    • Author(s)
      Kazumitsu Onizuka
    • Journal Title

      Bioconjugate Chem. 20

      Pages: 799-803

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A New Odorless Procedure for the synthesis of 2'deoxy-6-thioguanosine and It Incorporation Into Olieonucleotides.2009

    • Author(s)
      Kazumitsu Onizuka
    • Journal Title

      Nucleoside Nucleotide and Nudge acid 28

      Pages: 752-760

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Recognition of the CG interrupting site by W-shaped nucleoside analogs (WNA) having the pyrozole ring in an anti-parallel triplex DNA2009

    • Author(s)
      Yosuke Taniguchi
    • Journal Title

      Bioorg Med.Chem 17

      Pages: 6803-6810

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Site-specific modification of RNA by functionality-transfer ODN probes2009

    • Author(s)
      Kazumitsu Onizuka
    • Journal Title

      Nucleic Acids Symp.Ser 53

      Pages: 67-68

    • Related Report
      2009 Annual Research Report
  • [Journal Article] Evaluation of the antisense effect of PEGylated oligodeoxynucleotides containing intelligent nucleoside analogues2009

    • Author(s)
      Yosuke Taniguchi
    • Journal Title

      Nucleic Acids Symp.Ser 53

      Pages: 167-168

    • Related Report
      2009 Annual Research Report
  • [Journal Article] Formation of a stable triplex incorporating a CG interrupting site by a new WNA derivative containing 3-aminopyrazole as a nucleobase2008

    • Author(s)
      Yuko Uchida, Yosuke Taniguchi, Eriko Aoki, Mieko Togo, Shigeki Sasaki
    • Journal Title

      Nucleic Acids Symp. Ser. 52

      Pages: 137-138

    • Related Report
      2009 Final Research Report
  • [Journal Article] Synthesis of p-amino-WNA derivatives to enhance the stability of the anti-parallel triplex2008

    • Author(s)
      Yosuke Taniguchi, Mieko Togo, Eriko Aoki, Yuko Uchida, Shigeki Sasaki
    • Journal Title

      Tetrahedron 64

      Pages: 7164-7170

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Synthesis of p-amino-WNA derivatives to enhance the stability o f the anti-parallel triplex2008

    • Author(s)
      Yosuke Taniguchi, et.al.
    • Journal Title

      Tetrahedron 64

      Pages: 7164-7170

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Design of S-vinylated 6-thioguanosine as a specific modifier of cytidine2008

    • Author(s)
      Kazumitsu Onizuka, et.al.
    • Journal Title

      Collection Symp. Ser 10

      Pages: 159-163

    • Related Report
      2008 Annual Research Report
  • [Journal Article] Synthesis of the new nucleoside analogue connecting 2-amino-6-v inylpurine to the 2'-deoxyribose skeleton via the methylene linker2008

    • Author(s)
      Yusuke Kurose, et.al.
    • Journal Title

      Nucleic Acids Symp. Ser 54

      Pages: 43-44

    • Related Report
      2008 Annual Research Report
  • [Journal Article] Formation of a stable triplex incorporating a CG interrupting sit e by a new WNA derivative containing 3-aminopyrazole as a nu cleobase2008

    • Author(s)
      Yuko Uchida, et.al.
    • Journal Title

      Nucleic Acids Symp. Ser 52

      Pages: 137-138

    • Related Report
      2008 Annual Research Report
  • [Journal Article] Site-specific modification by functionality-transfer oligonucleotide with the photo-inducible reactivity2008

    • Author(s)
      Kazumitsu Onizuka, et.al.
    • Journal Title

      Nucleic Acids Symp. Ser 52

      Pages: 367-368

    • Related Report
      2008 Annual Research Report
  • [Journal Article] Selective fluorescence quenching of the 8-oxoG-clamp by 8-oxodeo xyguanosine in ODN2008

    • Author(s)
      Tamer Nasr, et.al.
    • Journal Title

      Bioorg. Med. Chem. Lett. 19

      Pages: 727-730

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Presentation] 3本鎖DNA形成を志向した新規二置換ヌクレオシドアナログの開発2010

    • Author(s)
      高木智子、谷口陽祐、石橋直人、佐々木茂貴
    • Organizer
      日本薬学会第130年会
    • Place of Presentation
      岡山
    • Year and Date
      2010-03-29
    • Related Report
      2009 Annual Research Report 2009 Final Research Report
  • [Presentation] 高感度遺伝子検出を目指した銅錯体-DNAプローブの創製2010

    • Author(s)
      谷口陽祐
    • Organizer
      日本薬学会第130年会
    • Place of Presentation
      岡山
    • Year and Date
      2010-03-29
    • Related Report
      2009 Annual Research Report
  • [Presentation] エチレンリンカーを導入したチオグアノシン誘導体の合成と機能評価2010

    • Author(s)
      西岡尊真
    • Organizer
      日本薬学会第130年会
    • Place of Presentation
      岡山
    • Year and Date
      2010-03-29
    • Related Report
      2009 Annual Research Report
  • [Presentation] 3本鎖DNA形成を志向した新規1',2'-二置換ヌクレオシドアナログの開発2009

    • Author(s)
      高木智子
    • Organizer
      第26回日本薬学会九州支部大会
    • Place of Presentation
      福岡
    • Year and Date
      2009-12-13
    • Related Report
      2009 Annual Research Report
  • [Presentation] 新規二核銅錯体-DNAコンジュゲートプローブを用いた高感度遺伝子検出法の開発2009

    • Author(s)
      新田晃子
    • Organizer
      第26回日本薬学会九州支部大会
    • Place of Presentation
      福岡
    • Year and Date
      2009-12-12
    • Related Report
      2009 Annual Research Report
  • [Presentation] 非天然型3本鎖DNA形成を可能にするW字型ビシクロ核酸誘導体の合成と機能評価2009

    • Author(s)
      谷口陽祐、内田裕子、高木智子、Tamer Nasr、青木絵里子、佐々木茂貴
    • Organizer
      第35回反応と合成の進歩シンポジウム
    • Place of Presentation
      金沢(口頭発表)
    • Year and Date
      2009-11-17
    • Related Report
      2009 Final Research Report
  • [Presentation] 8-オキソグアノシン特異的応答を示す蛍光プローブの開発2009

    • Author(s)
      李志春
    • Organizer
      第35回反応と合成の進歩シンポジウム
    • Place of Presentation
      金沢
    • Year and Date
      2009-11-17
    • Related Report
      2009 Annual Research Report
  • [Presentation] エチルリンカーを導入したチオグアノシン誘導体の合成と機能性核酸への展開2009

    • Author(s)
      西岡尊真
    • Organizer
      第35回反応と合成の進歩シンポジウム
    • Place of Presentation
      金沢
    • Year and Date
      2009-11-17
    • Related Report
      2009 Annual Research Report
  • [Presentation] 非天然型3本鎖DNA形成を可能にするW字型ビシクロ核酸誘導体の合成と機能評価2009

    • Author(s)
      谷口陽祐
    • Organizer
      第35回反応と合成の進歩シンポジウム
    • Place of Presentation
      金沢
    • Year and Date
      2009-11-17
    • Related Report
      2009 Annual Research Report
  • [Presentation] DESIGN OF NEW NUCLEOSIDE ANALOGS FOR THE FORMATION OF STABLE TRIPLEX DNA AND ITS APPLICATION TO ANTIGENE INHIBITION2009

    • Author(s)
      Yosuke Taniguchi, Yuko Uchida, Tomoko Takaki, Tamer Mohamed Nasr Hefni, Shigeki Sasaki
    • Organizer
      Joint Symposium of 5th Annual Meeting of Oligonucleotide Therapeutics Society and the 19th Antisense Symposium in Fukuoka, Japan
    • Place of Presentation
      Fukuoka
    • Year and Date
      2009-11-04
    • Related Report
      2009 Final Research Report
  • [Presentation] Site-Selective Chemical Modification of mRNA and its Effects on Polymerization and Translation2009

    • Author(s)
      Kazumitsu Onizuka
    • Organizer
      Joint Symposium of 5th Annual Meeting of Oligonucleotide Therapeutics Society and the 19th Antisense Symposium
    • Place of Presentation
      Fukuoka
    • Year and Date
      2009-11-04
    • Related Report
      2009 Annual Research Report
  • [Presentation] APPLICATION OF THE THIONUCLEOSIDE ANALOG FOR BASE- SELECTIVE PHOTO-CROSS LINKING2009

    • Author(s)
      Takamasa Nishioka
    • Organizer
      Joint Symposium of 5th Annual Meeting of Oligonucleotide Therapeutics Society and the 19th Antisense Symposium
    • Place of Presentation
      Fukuoka
    • Year and Date
      2009-11-04
    • Related Report
      2009 Annual Research Report
  • [Presentation] DESIGN OF NEW NUCLEOSIDE ANALOGS FOR THE FORMATION OF STABLE TRIPLEX DNA AND ITS APPLICATION TO ANTIGENE INHIBITION2009

    • Author(s)
      Yosuke Taniguchi
    • Organizer
      Joint Symposium of 5th Annual Meeting of Oligonucleotide Therapeutics Society and the 19th Antisense Symposium
    • Place of Presentation
      Fukuoka
    • Year and Date
      2009-11-04
    • Related Report
      2009 Annual Research Report
  • [Presentation] ANALYSIS OF TRANSLATED PRODUCTS FROM THE CHEMICALLY MODIFIED mRNA2009

    • Author(s)
      Mohd Shihabuddin Ahmad Noorden
    • Organizer
      Joint Symposium of 5th Annual Meeting of Oligonucleotide Therapeutics Society and the 19th Antisense Symposium
    • Place of Presentation
      Fukuoka
    • Year and Date
      2009-11-04
    • Related Report
      2009 Annual Research Report
  • [Presentation] Development of novel disustituted nucleoside analogs for the formation of triplex DNA2009

    • Author(s)
      Tomoko Takaki, Yosuke Taniguchi, Naoto Ishibashi, Shigeki Sasaki
    • Organizer
      Asian Federation for Pharmaceutical Sciences 2009
    • Place of Presentation
      Fukuoka
    • Year and Date
      2009-10-17
    • Related Report
      2009 Annual Research Report 2009 Final Research Report
  • [Presentation] EVALUATION OF THE RNA EDITING EFFICIENCY USING ANTISENSE OLIGONUCLEOTIDES CONTAINING THE FUNCTIONAL NUCLEOSIDE2009

    • Author(s)
      Mohd Shihabuddin Ahmad Noorden
    • Organizer
      Asian Federation for Pharmaceutical Sciences 2009
    • Place of Presentation
      Fukuoka
    • Year and Date
      2009-10-17
    • Related Report
      2009 Annual Research Report
  • [Presentation] Site-specific modification of RNA by functionality-transfer ODN probes2009

    • Author(s)
      Kazumitsu Onizuka
    • Organizer
      The 6th International symposium on Nucleic Acid Chemistry
    • Place of Presentation
      Gifu
    • Year and Date
      2009-09-27
    • Related Report
      2009 Annual Research Report
  • [Presentation] Evaluation of the antisense effect of PEGylated oligodeoxynucleotides containing intelligent nucleoside analogues2009

    • Author(s)
      Yosuke Taniguchi
    • Organizer
      The 6th International symposium on Nucleic Acid Chemistry
    • Place of Presentation
      Gifu
    • Year and Date
      2009-09-27
    • Related Report
      2009 Annual Research Report
  • [Presentation] RNAの部位特異的修飾能をもつ官能基転移性ODNプローブの開発2009

    • Author(s)
      鬼塚和光
    • Organizer
      第4回ケミカルバイオロジー研究会
    • Place of Presentation
      神戸
    • Year and Date
      2009-05-18
    • Related Report
      2009 Annual Research Report
  • [Presentation] 小さな認識塩基をもつW字型人工核酸の合成と3本鎖形成能の評価2009

    • Author(s)
      内田祐子、谷口陽祐、青木絵里子、東郷美枝子、佐々木茂貴
    • Organizer
      日本薬学会第129年会
    • Place of Presentation
      京都
    • Year and Date
      2009-03-27
    • Related Report
      2009 Final Research Report
  • [Presentation] 8-OxoG-clampを用いたDNA配列選択的な8-オキソグアニン蛍光検出法の開発2009

    • Author(s)
      李志春
    • Organizer
      日本薬学会第129年会
    • Place of Presentation
      京都
    • Related Report
      2008 Annual Research Report
  • [Presentation] Molecular design for detection of RNA transcripts, higher order DNA structures and tiny changes of necleobases2008

    • Author(s)
      Shigeki Sasaki
    • Organizer
      BMB2008
    • Place of Presentation
      神戸
    • Year and Date
      2008-12-11
    • Related Report
      2008 Annual Research Report
  • [Presentation] 官能基転移性DNAプローブによるRNAの部位特異的修飾2008

    • Author(s)
      鬼塚和光
    • Organizer
      第18回アンチセンスシンポジウム
    • Place of Presentation
      岐阜
    • Year and Date
      2008-09-28
    • Related Report
      2008 Annual Research Report
  • [Presentation] 機能性核酸を導入したアンチセンス核酸によるサイズの異なるタンパク質の発現2008

    • Author(s)
      谷口陽祐
    • Organizer
      第18回アンチセンスシンポジウム
    • Place of Presentation
      岐阜
    • Year and Date
      2008-09-28
    • Related Report
      2008 Annual Research Report
  • [Presentation] Formation of a stable triplex incorporating a CG interrupting site by a new WNA derivative containing 3-aminopyrazole as a nucleobase2008

    • Author(s)
      Yuko Uchida, Yosuke Taniguchi, Eriko Aoki, Mieko Togo, Shigeki Sasaki
    • Organizer
      Joint Symposium of the 18th International Roundtable on Nucleosides, Nucleotides, and Nucleic Acids and the 35th International Symposium on Nucleic Acids Chemistry
    • Place of Presentation
      Kyoto
    • Year and Date
      2008-09-08
    • Related Report
      2009 Final Research Report
  • [Presentation] 生体模倣2核銅錯体による化学発光を利用した遺伝子検出プローブの開発2008

    • Author(s)
      谷口陽祐
    • Organizer
      第3回ケミカルバイオロジー研究会
    • Place of Presentation
      東京
    • Related Report
      2008 Annual Research Report
  • [Presentation] Synthesis and properties of 1'-disubstituted Nucleoside Analogues2008

    • Author(s)
      Tamer M. Nasr
    • Organizer
      The First Egypt-Japan International Symposi urn on Science and Technology
    • Place of Presentation
      東京
    • Related Report
      2008 Annual Research Report
  • [Presentation] Design of S-vinylated 6-thioguanosine as a specific modifier of cy tidine2008

    • Author(s)
      Shigeki Sasaki
    • Organizer
      XIV Symposium on Chemistry of Nucleic Acid Components
    • Place of Presentation
      Prague in the Czech R epublic
    • Related Report
      2008 Annual Research Report
  • [Presentation] Formation of a stable triplex incorporating a CG interrupting site by a new WNA derivative containing 3-aminopyrazole as a nucleobase2008

    • Author(s)
      Yuko Uchid
    • Organizer
      Joint Symposium of the 18^<th> International Roundtable on Nucleosides, Nucleotides, and Nucleic Acids and the 35^<th> International Symposium on Nucleic Acids Chemistry
    • Place of Presentation
      Kyoto
    • Related Report
      2008 Annual Research Report
  • [Presentation] Synthesis of the new nucleoside analogue connecting 2'-amino-6-v inylpurine to the 2'-deoxyribose skeleton via the methylene linker2008

    • Author(s)
      Yusuke Kurose
    • Organizer
      Joint Symposium of the 18^<th> International Roundtable on Nucleosides, Nucleotides, and Nucleic Acids and the 35^<th> International Sy mposium on Nucleic Acids Chemistry
    • Place of Presentation
      Kyoto
    • Related Report
      2008 Annual Research Report
  • [Presentation] Site-specific modification by functionality-transfer oligonucleotide with the nhoto-inducible reactivity2008

    • Author(s)
      Kazumitsu Onizuka
    • Organizer
      Joint Symposium of the 18^<th> International Roundtable on Nucleosides, Nucleotides, and Nucleic Acids and the 35th International Sy mposium on Nucleic Acids Chemistry
    • Place of Presentation
      Kyoto
    • Related Report
      2008 Annual Research Report
  • [Presentation] 遺伝子特異的人工核酸のデリバリーシステムを用いた細胞内反応への展開一化学反応による遺伝子修飾および修復を目指して2008

    • Author(s)
      佐々木茂貴
    • Organizer
      第57回高分子討論会
    • Place of Presentation
      大阪市立大学
    • Related Report
      2008 Annual Research Report
  • [Presentation] 5員環認識塩基をもつWNA誘導体による非天然型3本鎖DNAの形成2008

    • Author(s)
      内田祐子
    • Organizer
      第25回日本薬学会九州支部大会
    • Place of Presentation
      宮崎
    • Related Report
      2008 Annual Research Report
  • [Presentation] 小さな認識塩基をもつW字型人工核酸の合成と3本鎖形成能の評価2008

    • Author(s)
      内田祐子
    • Organizer
      日本薬学会第129年会
    • Place of Presentation
      京都
    • Related Report
      2008 Annual Research Report
  • [Presentation] 異なる長さのリンカーを有するクロスリンク核酸の合成とその機能評価2008

    • Author(s)
      谷口陽祐
    • Organizer
      日本薬学会第129年会
    • Place of Presentation
      京都
    • Related Report
      2008 Annual Research Report
  • [Presentation] RNAの部位特異的化学修飾を可能にする官能基転移反応2008

    • Author(s)
      鬼塚和光
    • Organizer
      日本薬学会第129年会
    • Place of Presentation
      京都
    • Related Report
      2008 Annual Research Report
  • [Remarks]

    • URL

      http://bioorg.phar.kyushu-u.ac.jp/

    • Related Report
      2009 Final Research Report
  • [Remarks]

    • URL

      http://bioorg.phar.kyushu-u.ac.jp

    • Related Report
      2009 Annual Research Report
  • [Remarks]

    • URL

      http://bioorg.phar.kyushu-u.ac.jp/

    • Related Report
      2008 Annual Research Report

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Published: 2008-04-01   Modified: 2016-04-21  

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