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Development of transcriptional Zn(II) sensor based on protein conformational change

Research Project

Project/Area Number 20790099
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field Drug development chemistry
Research InstitutionOsaka University

Principal Investigator

HORI Yuichiro  Osaka University, 工学研究科, 助教 (00444563)

Project Period (FY) 2008 – 2009
Project Status Completed (Fiscal Year 2009)
Budget Amount *help
¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2009: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2008: ¥2,470,000 (Direct Cost: ¥1,900,000、Indirect Cost: ¥570,000)
Keywords構造変化 / 亜鉛イオン / 亜鉛フィンガー / ホメオドメイン / 転写因子 / センサー / DNA結合 / 人工蛋白質 / 構造変換 / ヘリックス・ターン・ヘリックス
Research Abstract

DNA-binding proteins have been attracting attention in the field of medical and life sciences and applied to the targeting and transcriptional control of particular genes. In this project, a Zn(II)-sensor protein, which binds to DNA, is designed by utilizing Antennafinger (Ant-F). Ant-F is an artificial protein, which induce structural change by binding Zn(II). This research will provide a basic tool, which could lead to the development of the technique for the detection of Zn(II) by transcriptional activity.

Report

(3 results)
  • 2009 Annual Research Report   Final Research Report ( PDF )
  • 2008 Annual Research Report
  • Research Products

    (21 results)

All 2010 2009 2008 Other

All Journal Article (8 results) (of which Peer Reviewed: 8 results) Presentation (11 results) Patent(Industrial Property Rights) (2 results)

  • [Journal Article]2010

    • Author(s)
      Hori, Y., Egashira, Y., Kamiura, R., Kikuchi, K.
    • Journal Title

      Chembiochem 11

      Pages: 646-648

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Photoactive Yellow Protein-Based Protein Labeling System with Turn-on Fluorescence Intensity2009

    • Author(s)
      Hori, Y., Ueno, H., Mizukami, S., Kikuchi, K.
    • Journal Title

      J. Am. Chem. Soc. 131

      Pages: 16610-16611

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Covalent protein labeling based on noncatalytic β-lactamase and a designed FRET substrate2009

    • Author(s)
      Mizukami, S., Watanabe, S., Hori, Y., Kikuchi, K.
    • Journal Title

      J. Am. Chem. Soc. 131

      Pages: 5016-5017

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Photoactive yellow protein-based protein labeling system with turn-on fluorescence intensity2009

    • Author(s)
      Yuichiro Hori
    • Journal Title

      Journal of the American Chemical Society 131

      Pages: 16610-16611

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Covalent protein labeling based on noncatalytic beta-lactamase and a designed FRET substrate2009

    • Author(s)
      Shin Mizukami
    • Journal Title

      Journal of the American Chemical Society 131

      Pages: 5016-5017

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Activation of protein splicing by protease- or light-triggered O to N acyl migration2008

    • Author(s)
      Vila-Perello, M., Hori, Y., Ribo, M., Muir, T.W.
    • Journal Title

      Angew. Chem. Int. Ed. 47

      Pages: 7764-7767

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Activation of protein splicing by protease- or light-triggered O to N acyl migration2008

    • Author(s)
      Miguel Vila-Perello
    • Journal Title

      Angewandte Chemie International Edition 47

      Pages: 7764-7767

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Noncovalent interaction-promoted ligation for protein labeling

    • Author(s)
      Yuichiro Hori
    • Journal Title

      Chembiochem (「in press」(印刷中))

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Presentation] Photoactive Yellow Proteinをタグ蛋白質とした蛍光強度増大型蛋白質ラベル化法の開発2010

    • Author(s)
      堀雄一郎、上野秀樹、中木恭平、菊地和也
    • Organizer
      日本薬学会第130年会
    • Place of Presentation
      岡山
    • Year and Date
      2010-03-30
    • Related Report
      2009 Final Research Report
  • [Presentation] 新規タグ蛋白質Photoactive Yellow Protein(PYP)と蛍光強度増大型プローブを利用した蛋白質ラベル化システム2010

    • Author(s)
      中木恭平、堀雄一郎、上野秀樹、菊地和也
    • Organizer
      日本化学会第90春季年会
    • Place of Presentation
      大阪
    • Year and Date
      2010-03-29
    • Related Report
      2009 Final Research Report
  • [Presentation] 小さなペプチドタグとインテインを利用した共有結合型蛋白質標識法の開発2010

    • Author(s)
      堀雄一郎、江頭由佳、上浦良介、菊地和也
    • Organizer
      日本化学会第90春季年会
    • Place of Presentation
      大阪
    • Year and Date
      2010-03-28
    • Related Report
      2009 Final Research Report
  • [Presentation] Fluorogenic Protein Labeling System Based on Photoactive Yellow Protein2009

    • Author(s)
      Ueno, H., Hori, Y., Kikuchi, K.
    • Organizer
      5th Spanish-Portuguese-Japanese Organic Chemistry Symposium (5th SPJ-OCS)
    • Place of Presentation
      大阪
    • Year and Date
      2009-11-07
    • Related Report
      2009 Final Research Report
  • [Presentation] 小さなペプチドタグ配列を利用した共有結合型ラベリング法2009

    • Author(s)
      江頭有佳、堀雄一郎、上浦良介、菊地和也
    • Organizer
      第24回生体機能関連化学シンポジウム
    • Place of Presentation
      福岡
    • Year and Date
      2009-09-14
    • Related Report
      2009 Final Research Report
  • [Presentation] Photoactive Yellow Proteinをタグ蛋白質とした蛍光強度増大型ラベル化法の開発2009

    • Author(s)
      堀雄一郎、上野秀樹、菊地和也
    • Organizer
      第24回生体機能関連化学シンポジウム
    • Place of Presentation
      福岡
    • Year and Date
      2009-09-14
    • Related Report
      2009 Final Research Report
  • [Presentation] 小分子化合物を用いた膜蛋白質の分解法研究2009

    • Author(s)
      堀雄一郎、上野秀樹、菊地和也
    • Organizer
      日本ケミカルバイオロジー学会第4回年会
    • Place of Presentation
      神戸
    • Year and Date
      2009-05-19
    • Related Report
      2009 Final Research Report
  • [Presentation] Photoactive Yellow Proteinをタグ蛋白質とした蛍光ラベリング法の開発2009

    • Author(s)
      上野秀樹、堀雄一郎、菊地和也
    • Organizer
      日本分子イメージング学会第4回学術総会・学術集会
    • Place of Presentation
      東京
    • Year and Date
      2009-05-15
    • Related Report
      2009 Final Research Report
  • [Presentation] Photoactive Yellow Proteinをタグ蛋白質とした蛍光強度増大型ラベル化法の開発2009

    • Author(s)
      上野秀樹、堀雄一郎、菊地和也
    • Organizer
      日本化学会第89春季年会
    • Place of Presentation
      千葉
    • Year and Date
      2009-03-29
    • Related Report
      2009 Final Research Report
  • [Presentation] 小分子化合物を用いた膜タンパク質の翻訳後ノックダウン法2009

    • Author(s)
      堀雄一郎、芝田茜、菊地和也
    • Organizer
      日本化学会第89春季年会
    • Place of Presentation
      千葉
    • Year and Date
      2009-03-29
    • Related Report
      2009 Final Research Report 2008 Annual Research Report
  • [Presentation] 膜タンパク質の小分子化合物による新規分解法の開発2009

    • Author(s)
      堀雄一郎、芝田茜、菊地和也
    • Organizer
      日本薬学会第129年会
    • Place of Presentation
      京都
    • Year and Date
      2009-03-26
    • Related Report
      2009 Final Research Report 2008 Annual Research Report
  • [Patent(Industrial Property Rights)] 蛋白質を蛍光標識する方法2010

    • Inventor(s)
      菊地和也, 堀雄一郎, 上野秀樹
    • Industrial Property Rights Holder
      大阪大学
    • Filing Date
      2010-03-10
    • Related Report
      2009 Final Research Report
  • [Patent(Industrial Property Rights)] タンパク質を二段階標識する方法2009

    • Inventor(s)
      菊地和也, 堀雄一郎, 上野秀樹
    • Industrial Property Rights Holder
      大阪大学
    • Filing Date
      2009-03-10
    • Related Report
      2009 Final Research Report

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Published: 2008-04-01   Modified: 2016-04-21  

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