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Single molecular analysis of the nuclear membrane formation

Research Project

Project/Area Number 20870022
Research Category

Grant-in-Aid for Young Scientists (Start-up)

Allocation TypeSingle-year Grants
Research Field Functional biochemistry
Research InstitutionKyoto University

Principal Investigator

HIRANO Yasuhiro  Kyoto University, 生命機能研究科, 特任研究員 (10508641)

Project Period (FY) 2008 – 2009
Project Status Completed (Fiscal Year 2009)
Budget Amount *help
¥3,302,000 (Direct Cost: ¥2,540,000、Indirect Cost: ¥762,000)
Fiscal Year 2009: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2008: ¥1,742,000 (Direct Cost: ¥1,340,000、Indirect Cost: ¥402,000)
Keywords核膜 / 1分子解析 / LEMタンパク質 / BAF / リン酸化 / コア領域 / NMR
Research Abstract

The unique structure termed 'core region' is formed on the center of chromosome at telophase. In this study, I aimed to analyze the core formation mechanism at a single molecular level. To approach this issue, I investigated 1) the 3D-structure of emerin, and 2) a BAF binding site on the chromosomes, those of which were crucial factors to form the core region. By a nuclear magnetic resonance analysis, it was revealed that emerin did not take a solid structure in a solution except the LEM domain, which directly binds to BAF. On the other hand, BAF relatively binds to a transcription-active region at telophase although it binds to a transcription-negative region at interphase. From these evidences, the molecular dynamics of the proteins needed to form the core region are gradually uncovered at a single molecular level.

Report

(3 results)
  • 2009 Annual Research Report   Final Research Report ( PDF )
  • 2008 Annual Research Report
  • Research Products

    (15 results)

All 2009 2008

All Journal Article (7 results) (of which Peer Reviewed: 7 results) Presentation (8 results)

  • [Journal Article] Cell cycle-dependent phosphorylation of MAN1.2009

    • Author(s)
      Y. Hirano, Y. Iwase, K. Ishii, M. Kumeta, T. Horigome, K. Takeyasu.
    • Journal Title

      Biochemistry 48

      Pages: 1636-1643

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Proteomic and targeted analytical identification of BXDC1 and EBNA1BP2 as dynamic scaffold proteins in the nucleolus2009

    • Author(s)
      Y. Hirano, K. Ishii, M. Kumeta, K. Furukawa, K. Takeyasu, T. Horigome.
    • Journal Title

      Genes Cell 14

      Pages: 155-166

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Cell cycle-dependent phosphorylation of MAN12009

    • Author(s)
      Y. Hirano, Y. Iwase, K. Ishii, M. Kumeta, T. Horigome, K. Takeyasu
    • Journal Title

      Biochemistry 48

      Pages: 1636-1643

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Proteomic and targeted analytical identification of BXDC1 and EBNA1BP2 as dynamic scaffold proteins in the nucleolus2009

    • Author(s)
      Y. Hirano, K. Ishii, M. Kumeta, K. Furukawa, K. Takeyasu, T. Horigome
    • Journal Title

      Genes to Cells 14

      Pages: 155-166

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Nuclear matrix contains novel WD-repeat and disordered-region-rich proteins2008

    • Author(s)
      K. Ishii, Y. Hirano, N. Araki, T. Oda, M. Kumeta, K. Takeyasu, K. Furukawa, T. Horigome.
    • Journal Title

      FEBS lett. 582

      Pages: 3515-3519

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Nuclear architecture and chromatin dynamics revealed by atomic force microscopy in combination with biochemistry and cell biology2008

    • Author(s)
      Y. Hirano, H. Takahashi, M. Kumeta, K. Hizume, S. Ohtsuka, S.H. Yoshimura, K. Takeyasu
    • Journal Title

      Pflugers Arch. 456(1)

      Pages: 139-153

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Nuclear matrix contains novel WD-repeat and disordered-region-rich proteins2008

    • Author(s)
      K. Ishii, Y. Hirano, N. Araki, T. Oda, M. Kumeta, K. Takeyasu, K. Furukawa, T. Horigome
    • Journal Title

      FEBS letter 582

      Pages: 3515-3519

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Presentation] Roles of the Tudor Domain of Lamin B Receptor for Chromatin Condensation2008

    • Author(s)
      Y. Hirano, K. Hizume, Y. Suzuki, H. Takahashi, T. Horigome, K.
    • Organizer
      Annual meeting of American Society of Cell Biology
    • Place of Presentation
      San Francisco
    • Year and Date
      2008-12-14
    • Related Report
      2008 Annual Research Report
  • [Presentation] Functional Characterization of Nuclear Alpha-actinin 42008

    • Author(s)
      M. Kumeta, Y. Hirano, K., Hashida, S. Yoshimura, K. Takeyasu
    • Organizer
      Annual meeting of American Society of Cell Biology
    • Place of Presentation
      San Francisco
    • Year and Date
      2008-12-14
    • Related Report
      2008 Annual Research Report
  • [Presentation] Structural and Functional Domains of a Nucleolar Protein, N0662008

    • Author(s)
      Y. Hirai, Y. Hirano, M. Kumeta, K. Takeyasu
    • Organizer
      Annual meeting of American Society of Cell Biology
    • Place of Presentation
      San Francisco
    • Year and Date
      2008-12-14
    • Related Report
      2008 Annual Research Report
  • [Presentation] Roles of the Tudor Domain of Lamin B Receptor for Chromatin Condensation2008

    • Author(s)
      Y. Hirano, K. Hizume, Y. Suzuki, H. Takahashi, T. Horigome, K. Takeyasu
    • Organizer
      Annual meeting of American Society of Cell Biology
    • Place of Presentation
      San Francisco, USA
    • Related Report
      2009 Final Research Report
  • [Presentation] Functional Characterization of Nuclear Alpha-actinin 42008

    • Author(s)
      M. Kumeta, Y. Hirano, K., Hashida, S. Yoshimura, K. Takeyasu
    • Organizer
      Annual meeting of American Society of Cell Biology
    • Place of Presentation
      San Francisco, USA
    • Related Report
      2009 Final Research Report
  • [Presentation] Structural and Functional Domains of a Nucleolar Protein, NO662008

    • Author(s)
      Y. Hirai, Y. Hirano, M. Kumeta, K. Takeyasu
    • Organizer
      Annual meeting of American Society of Cell Biology
    • Place of Presentation
      San Francisco, USA
    • Related Report
      2009 Final Research Report
  • [Presentation] FUNCTIONAL CHARACTERIZATION OF NUCLEARα-ACTININ 4.2008

    • Author(s)
      M. Kumeta, Y. Hirano, K. Hashida, S.H. Yoshimura, K. Takeyasu
    • Organizer
      Dynamic organization of nuclear function
    • Place of Presentation
      Cold Spring Harbor, USA
    • Related Report
      2009 Final Research Report
  • [Presentation] Mitotic specific translocation of one of the focal adhesion proteins, α-actinin 4, to the nucleolar organizer regions2008

    • Author(s)
      M. Kumeta, Y. Hirano, Y. Hirai, K. Hashida, S.H. Yoshimura K. Takeyasu
    • Organizer
      EMBO workshop On The Nucleolus and The Disease
    • Place of Presentation
      Derby, UK
    • Related Report
      2009 Final Research Report

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Published: 2008-04-01   Modified: 2016-04-21  

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