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Elucidation of biological phenomena regulated by ubiquitin-dependent proteolysis

Research Project

Project/Area Number 20H03208
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Review Section Basic Section 43030:Functional biochemistry-related
Research InstitutionNagoya University

Principal Investigator

Kamura Takumi  名古屋大学, 理学研究科, 教授 (40333455)

Project Period (FY) 2020-04-01 – 2023-03-31
Project Status Completed (Fiscal Year 2022)
Budget Amount *help
¥17,810,000 (Direct Cost: ¥13,700,000、Indirect Cost: ¥4,110,000)
Fiscal Year 2022: ¥5,590,000 (Direct Cost: ¥4,300,000、Indirect Cost: ¥1,290,000)
Fiscal Year 2021: ¥5,590,000 (Direct Cost: ¥4,300,000、Indirect Cost: ¥1,290,000)
Fiscal Year 2020: ¥6,630,000 (Direct Cost: ¥5,100,000、Indirect Cost: ¥1,530,000)
Keywordsタンパク質分解 / ユビキチン
Outline of Research at the Start

ユビキチン・プロテアソーム系を介したタンパク質分解は、細胞周期進行など多岐にわたる生命現象に重要な働きを果たしている。現在までの精力的な研究により生体内に非常に多くのE3が存在し、基質特異性を決める役割を果たしていることが明らかになっている。その中でもSCF複合体が重要な役割を担っていることが予想されている。最近我々は出芽酵母の充実したリソースとデータベースを活用することにより、短寿命タンパク質から対応するE3を同定する方法を見出している。そこで本研究では、SCF複合体の新規機能解明を行ない、最終的にはユビキチン依存性タンパク質分解という観点から様々な生命現象を解明することを目的とする。

Outline of Final Research Achievements

Protein degradation via the ubiquitin-proteasome system has attracted much attention because of its important roles in various biological phenomena. Many E3 ubiquitin-modifying enzymes exist in vivo and play a role in determining substrate specificity. The challenge in this field is to identify these E3 target proteins and clarify their physiological significance. In this study, we identified and analyzed E3 Dma1/Dma2 for the budding yeast short-lived protein Mmr1. As a result, we elucidated the mechanism by which mitochondria, an intracellular organelle, are inherited by new cells.

Academic Significance and Societal Importance of the Research Achievements

ユビキチン・プロテアソーム系を介したタンパク質分解は、多岐にわたる生命現象に重要な働きを果たしていることが明らかになっている。現在までの精力的な研究により生体内に非常に多くのE3が存在し、重要な役割を担っていることが予想されている。今回のわれわれの発見は、タンパク質を積極的に分解する「プロテオリシス」の新しい役割として注目すべきものであり、学術的意義は高いものである。また、ミトコンドリアをはじめとした細胞小器官の輸送や分布の異常に伴う疾病の原因解明や創薬が進むこと期待される。

Report

(4 results)
  • 2022 Annual Research Report   Final Research Report ( PDF )
  • 2021 Annual Research Report
  • 2020 Annual Research Report
  • Research Products

    (25 results)

All 2023 2022 2021 2020 Other

All Int'l Joint Research (3 results) Journal Article (8 results) (of which Int'l Joint Research: 4 results,  Peer Reviewed: 8 results,  Open Access: 7 results) Presentation (11 results) Remarks (3 results)

  • [Int'l Joint Research] Cornell University/University of Hawai'i/University of Pittsburgh(米国)

    • Related Report
      2022 Annual Research Report
  • [Int'l Joint Research] University of Pittsburgh(米国)

    • Related Report
      2021 Annual Research Report
  • [Int'l Joint Research] The University of Texas(米国)

    • Related Report
      2020 Annual Research Report
  • [Journal Article] Regulator of Awn Elongation 3, an E3 ubiquitin ligase, is responsible for loss of awns during African rice domestication2023

    • Author(s)
      Bessho-Uehara Kanako、Masuda Kengo、Wang Diane R.、Angeles-Shim Rosalyn B.、Obara Keisuke、Nagai Keisuke、Murase Riri、Aoki Shin-ichiro、Furuta Tomoyuki、Miura Kotaro、Wu Jianzhong、Yamagata Yoshiyuki、Yasui Hideshi、Kantar Michael B.、Yoshimura Atsushi、Kamura Takumi、McCouch Susan R.、Ashikari Motoyuki
    • Journal Title

      Proceedings of the National Academy of Sciences

      Volume: 120 Issue: 4

    • DOI

      10.1073/pnas.2207105120

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] A positive genetic selection for transmembrane domain mutations in HRD1 underscores the importance of Hrd1 complex integrity during ERAD2022

    • Author(s)
      Nakatsukasa Kunio、Wigge Sylvia、Takano Yuki、Kawarasaki Tomoyuki、Kamura Takumi、Brodsky Jeffrey L.
    • Journal Title

      Current Genetics

      Volume: 68 Issue: 2 Pages: 227-242

    • DOI

      10.1007/s00294-022-01227-1

    • Related Report
      2022 Annual Research Report 2021 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Triacylglycerol lipase Tgl4 is a stable protein and its dephosphorylation is regulated in a cell cycle-dependent manner in Saccharomyces cerevisiae2022

    • Author(s)
      Nakatsukasa Kunio、Fujisawa Munetaka、Yang Xiaotan、Kawarasaki Tomoyuki、Okumura Fumihiko、Kamura Takumi
    • Journal Title

      Biochemical and Biophysical Research Communications

      Volume: 626 Pages: 85-91

    • DOI

      10.1016/j.bbrc.2022.08.022

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Proteolysis of adaptor protein Mmr1 during budding is necessary for mitochondrial homeostasis in Saccharomyces cerevisiae2022

    • Author(s)
      Obara Keisuke、Yoshikawa Taku、Yamaguchi Ryu、Kuwata Keiko、Nakatsukasa Kunio、Nishimura Kohei、Kamura Takumi
    • Journal Title

      Nature Communications

      Volume: 13 Issue: 1 Pages: 1-15

    • DOI

      10.1038/s41467-022-29704-8

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Dot6/Tod6 degradation fine-tunes the repression of ribosome biogenesis under nutrient-limited conditions2022

    • Author(s)
      Kusama Kino、Suzuki Yuta、Kurita Ena、Kawarasaki Tomoyuki、Obara Keisuke、Okumura Fumihiko、Kamura Takumi、Nakatsukasa Kunio
    • Journal Title

      iScience

      Volume: 25 Issue: 3 Pages: 103986-103986

    • DOI

      10.1016/j.isci.2022.103986

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] ZSWIM8 is a myogenic protein that partly prevents C2C12 differentiation2021

    • Author(s)
      Okumura Fumihiko、Oki Nodoka、Fujiki Yuha、Ikuta Rio、Osaki Kana、Hamada Shun、Nakatsukasa Kunio、Hisamoto Naoki、Hara Taichi、Kamura Takumi
    • Journal Title

      Scientific Reports

      Volume: 11 Issue: 1 Pages: 20880-20880

    • DOI

      10.1038/s41598-021-00306-6

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Rapid turnover of transcription factor Rim101 highlights a flexible adaptation mechanism against environmental stress in Saccharomyces cerevisiae.2020

    • Author(s)
      Obara K, Higuchi M, Ogura Y, Nishimura K, Kamura T
    • Journal Title

      Genes to Cells

      Volume: 25 Issue: 10 Pages: 651-662

    • DOI

      10.1111/gtc.12801

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A super-sensitive auxin-inducible degron system with an engineered auxin-TIR1 pair.2020

    • Author(s)
      Kohei Nishimura , Ryotaro Yamada , Shinya Hagihara , Rie Iwasaki , Naoyuki Uchida , Takumi Kamura , Koji Takahashi , Keiko U Torii , Tatsuo Fukagawa
    • Journal Title

      Nucleic acids research

      Volume: 48 Issue: 18 Pages: e108-e108

    • DOI

      10.1093/nar/gkaa748

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Presentation] 出芽酵母短寿命タンパク質Nih1によるグルコース飢餓応答遺伝子の発現調節2022

    • Author(s)
      野中一輝、小原圭介、西村浩平、嘉村巧
    • Organizer
      第45回日本分子生物学会年会
    • Related Report
      2022 Annual Research Report
  • [Presentation] HECT型E3リガーゼMtn1によるリボソーム生合成の調節機構の解析2022

    • Author(s)
      永本愛奈、酒井洋二、西村浩平、小原圭介、嘉村巧
    • Organizer
      第45回日本分子生物学会年会
    • Related Report
      2022 Annual Research Report
  • [Presentation] 迅速かつ低毒性に標的タンパク質を分解するTPB-ssAIDシステムの開発2022

    • Author(s)
      小川佳孝、小原圭介、西村浩平、嘉村巧
    • Organizer
      第45回日本分子生物学会年会
    • Related Report
      2022 Annual Research Report
  • [Presentation] ヒト培養細胞におけるピルビン酸キナーゼの活性制御機構の解明2022

    • Author(s)
      福原佳乃、西村浩平、小原圭介、嘉村巧
    • Organizer
      第45回日本分子生物学会年会
    • Related Report
      2022 Annual Research Report
  • [Presentation] 出芽酵母Tsk1はSnf1依存的低グルコース応答シグナルの負の制御因子である2021

    • Author(s)
      深瀨文奈子、佐々木怜菜、小原圭介、西村浩平、嘉村巧
    • Organizer
      第44回日本分子生物学会年会
    • Related Report
      2021 Annual Research Report
  • [Presentation] 最後の機能未知必須遺伝子PBR1の機能解析2021

    • Author(s)
      大喜多葵、熊崎健太、岡田啓希、久保佳蓮、西村浩平、小原圭介、大矢禎一、嘉村巧
    • Organizer
      第44回日本分子生物学会年会
    • Related Report
      2021 Annual Research Report
  • [Presentation] 娘細胞特異的因子Dse3はRho1-GAPの調節を通して細胞壁合成を正に制御する2021

    • Author(s)
      小倉佑季、小原圭介、小林恵里花、西村浩平、吉田知史、嘉村巧
    • Organizer
      第44回日本分子生物学会年会
    • Related Report
      2021 Annual Research Report
  • [Presentation] 出芽酵母Tmc1の亜ヒ酸応答に関する機能解明2021

    • Author(s)
      松本佳紘, 渡辺祥太郎, 西村浩平, 小原圭介, 嘉村巧
    • Organizer
      第44回日本分子生物学会年会
    • Related Report
      2021 Annual Research Report
  • [Presentation] アダプタータンパク質Mmr1の選択的分解によるミトコンドリアの局在と機能の制御2020

    • Author(s)
      吉川 拓、小原 圭介、西村 浩平、嘉村 巧
    • Organizer
      第43回日本分子生物学会
    • Related Report
      2020 Annual Research Report
  • [Presentation] 出芽酵母Dse3は極性成長時の細胞壁合成を促進する2020

    • Author(s)
      小倉 佑季、小原 圭介、西村 浩平、嘉村 巧
    • Organizer
      第43回日本分子生物学会
    • Related Report
      2020 Annual Research Report
  • [Presentation] 娘細胞特異的因子Dse3は出芽酵母の極性成長時の細胞壁合成を促進する2020

    • Author(s)
      小原 圭介、小林 恵里花、西村 浩平、嘉村 巧
    • Organizer
      第72回日本細胞生物学会大会
    • Related Report
      2020 Annual Research Report
  • [Remarks]

    • URL

      https://sites.google.com/view/kamura-lab

    • Related Report
      2022 Annual Research Report
  • [Remarks]

    • URL

      https://sites.google.com/view/kamura-lab/%E3%83%9B%E3%83%BC%E3%83%A0

    • Related Report
      2021 Annual Research Report
  • [Remarks] 嘉村研へようこそ

    • URL

      https://sites.google.com/view/kamura-lab/%E3%83%9B%E3%83%BC%E3%83%A0

    • Related Report
      2020 Annual Research Report

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Published: 2020-04-28   Modified: 2024-01-30  

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