• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

TIRF visualization of the polymerization dynamics of bacterial actin cytoskeleton, MreB and A22 driven disruption mechanism

Research Project

Project/Area Number 20K06591
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Review Section Basic Section 43040:Biophysics-related
Research InstitutionNagaoka University of Technology (2021-2022)
Osaka City University (2020)

Principal Investigator

Fujiwara Ikuko  長岡技術科学大学, 工学研究科, 准教授 (10742075)

Project Period (FY) 2020-04-01 – 2023-03-31
Project Status Completed (Fiscal Year 2022)
Budget Amount *help
¥4,420,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥1,020,000)
Fiscal Year 2022: ¥650,000 (Direct Cost: ¥500,000、Indirect Cost: ¥150,000)
Fiscal Year 2021: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2020: ¥2,600,000 (Direct Cost: ¥2,000,000、Indirect Cost: ¥600,000)
KeywordsMreB / A22 / 重合 / タンパク質構造 / アクチン / スピロプラズマ / 繊維 / 光散乱 / 構造解析 / ATP加水分解 / ATP加水分解メカニズム / MreB繊維の可視化 / 細胞運動
Outline of Research at the Start

多くの細菌はペプチドグリカン層を含んだ細胞壁を持つ。ペプチドグリカン層の合成には、細菌版アクチンであるMreBが必須である。MreBは重合して繊維を作って細胞内壁を周回するが、A22を入れるとMreB繊維は減少してペプチドグリカン層が形成されなくなる。しかしA22が、MreB重合過程のどのプロセスを阻害してMreB繊維を減少させるか分かっていない。そこで、TIRF観察によって細菌アクチンMreBの重合ダイナミクスと、MreB阻害剤A22の作用を分子レベルで理解する。

Outline of Final Research Achievements

MreB is a bacterial cytoskeleton having a similar shape to actin. An inhibitor A22 is used to study the polymerization of MreB, but it remains unclear which process of MreB polymerization dynamics are inhibited. A22 addition to Spiroplasma disrupted helical swimming, suggesting an interaction between A22 and MreB. Structural analysis of Spiroplasma MreB3 revealed that the differences on ATP hydrolysis site was the cause of slow ATPase. Spiroplasma MreB5 forms a sheet structure in which several filaments are aligned side by side, and MreB5 continues to hydrolyze ATP even after polymerized, suggesting the possibility of renewing the filament structure with a rapid turnover.

Academic Significance and Societal Importance of the Research Achievements

多くの細菌に存在し、細胞の形態維持に必須であるMreBのタンパク質としての機能の解明は難しい。この理由として、菌体におけるMreBの影響を調べる研究が、重合阻害剤A22またはMreB欠損株から得られたものしかなく、MreBの重合・脱重合という、菌の形を保つために必須の動的ダイナミクスの相関が未解明であることが挙げられる。これら病原菌に対し、A22による阻害メカニズムの理解は、分子レベルで病原性細菌の運動メカニズムの理解につなげられる点で意義が大きく、A22を基にして、創薬や病原体診断・検査、治療、及び予防法の開発に応用できる可能性を含む。以上から基礎学術をはじめ、多分野にて役立つ研究である。

Report

(4 results)
  • 2022 Annual Research Report   Final Research Report ( PDF )
  • 2021 Research-status Report
  • 2020 Research-status Report
  • Research Products

    (40 results)

All 2023 2022 2021 2020

All Journal Article (10 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 9 results,  Open Access: 7 results) Presentation (30 results) (of which Int'l Joint Research: 3 results)

  • [Journal Article] Assembly properties of bacterial actin MreB involved in Spiroplasma swimming motility2023

    • Author(s)
      Daichi Takahashi, Makoto Miyata, Ikuko Fujiwara
    • Journal Title

      J Biol Chem

      Volume: 104793 Issue: 6 Pages: 104793-104793

    • DOI

      10.1016/j.jbc.2023.104793

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Purification and ATPase Activity Measurement of Spiroplasma MreB2023

    • Author(s)
      Takahashi Daichi、Fujiwara Ikuko、Miyata Makoto
    • Journal Title

      Methods in Molecular Biology

      Volume: - Pages: 359-371

    • DOI

      10.1007/978-1-0716-3060-0_30

    • ISBN
      9781071630594, 9781071630600
    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] ATP-dependent polymerisation dynamics of bacterial actin proteins involved in Spiroplasma swimming2022

    • Author(s)
      Takahashi D, Fujiwara I, Sasajima Y, Narita A, Imada K and Miyata M
    • Journal Title

      Open Biology

      Volume: 26 Issue: 10 Pages: 220083-220083

    • DOI

      10.1098/rsob.220083

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] ATP dependent polymerization dynamics of bacterial actin proteins involved in Spiroplasma swimming2022

    • Author(s)
      Daichi Takahashi, Ikuko Fujiwara, Yuya Sasajima, Akihiro Narita, Katsumi Imada, Makoto Miyata
    • Journal Title

      BioRxiv

      Volume: 1 Pages: 1-1

    • DOI

      10.1101/2021.04.07.438887

    • Related Report
      2021 Research-status Report
    • Open Access
  • [Journal Article] Movements of Mycoplasma mobile Gliding Machinery Detected by High-Speed Atomic Force Microscopy2021

    • Author(s)
      K. Kobayashi, N. Kodera, T. Kasai, YO. Tahara, T. Toyonaga, M. Mizutani, I. Fujiwara, T. Ando, M. Miyata
    • Journal Title

      mBio

      Volume: 12 Issue: 3 Pages: e00040-21

    • DOI

      10.1128/mbio.00040-21

    • NAID

      120007044470

    • URL

      https://ocu-omu.repo.nii.ac.jp/records/2020097

    • Related Report
      2021 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Structural insights into the regulation of actin capping protein by twinfilin C-terminal tail2021

    • Author(s)
      Shuichi Takeda, Ryotaro Koike, Ikuko Fujiwara, Akihiro Narita, Makoto Miyata, Motonori Ota and Yuichiro Maeda
    • Journal Title

      J Mol Biol

      Volume: 433 Issue: 9 Pages: 166891-166891

    • DOI

      10.1016/j.jmb.2021.166891

    • Related Report
      2021 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Crystal structure of human V-1 in the apo form2021

    • Author(s)
      Shuichi Takeda, Ryotaro Koike, Takayuki Nagae, Ikuko Fujiwara, Akihiro Narita, Yuichiro Maeda, Motonori Ota
    • Journal Title

      Acta Crystallogr F Struct Biol Commun

      Volume: 77 Issue: 1 Pages: 13-21

    • DOI

      10.1107/s2053230x20016829

    • Related Report
      2020 Research-status Report
    • Peer Reviewed
  • [Journal Article] Phylogenetic origin and sequence features of MreB from the wall-less swimming bacteria Spiroplasma2020

    • Author(s)
      Takahashi Daichi、Fujiwara Ikuko、Miyata Makoto
    • Journal Title

      Biochemical and Biophysical Research Communications

      Volume: 533 Issue: 4 Pages: 638-644

    • DOI

      10.1016/j.bbrc.2020.09.060

    • Related Report
      2020 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Myosin 18Aα targets the guanine nucleotide exchange factor β‐Pix to the dendritic spines of cerebellar Purkinje neurons and promotes spine maturation2020

    • Author(s)
      Alexander Christopher J.、Barzik Melanie、Fujiwara Ikuko、Remmert Kirsten、Wang Ya‐Xian、Petralia Ronald S.、Friedman Thomas B.、Hammer John A.
    • Journal Title

      The FASEB Journal

      Volume: 35 Issue: 1

    • DOI

      10.1096/fj.202001449r

    • Related Report
      2020 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] D-Loop Mutation G42A/G46A Decreases Actin Dynamics2020

    • Author(s)
      Matsuzaki Mizuki、Fujiwara Ikuko、Kashima Sae、Matsumoto Tomoharu、Oda Toshiro、Hayashi Masahito、Maeda Kayo、Takiguchi Kingo、Ma?da Yuichiro、Narita Akihiro
    • Journal Title

      Biomolecules

      Volume: 10 Issue: 5 Pages: 736-736

    • DOI

      10.3390/biom10050736

    • Related Report
      2020 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] 細菌アクチンMreBの繊維構造多型2023

    • Author(s)
      高橋大地, 藤原郁子, 成田哲博, 宮田真人
    • Organizer
      生体運動研究合同班会議
    • Related Report
      2022 Annual Research Report
  • [Presentation] 真菌毒サイトカラシンDはアクチン線維を切断する2023

    • Author(s)
      三谷隆大, 武田修一, 藤原郁子, 本多元
    • Organizer
      生体運動研究合同班会議
    • Related Report
      2022 Annual Research Report
  • [Presentation] QCM測定による周波数変化から測定したアクトミオシン滑り運動の機構2022

    • Author(s)
      Honoka Kobayashi, Naoki Matsumoto, Taiki Nishimura, Yuki Sakurai, Kaho Yokomuro, Kazuya Soda, Ikuko Fujiwara, Hajime Honda
    • Organizer
      第60回日本生物物理学会年会, 函館
    • Related Report
      2022 Annual Research Report
  • [Presentation] QCM上でのアクトミオシンの滑走速度と周波数変化の関係2022

    • Author(s)
      Taiki Nisimura, Naoki Matumoto, Honoka Kobayasi, Yuuki Sakurai, Kaito Kobayasi, Kaho Yokomuro, Ikuko Fujiwara, Hajime Honda
    • Organizer
      第60回日本生物物理学会年会, 函館
    • Related Report
      2022 Annual Research Report
  • [Presentation] TIRF観察によるアクチン線維に対するサイトカラシンDの作用理解2022

    • Author(s)
      Takahiro Mitani, Hikaru Empuku, Shuichi Takeda, Ikuko Fujiwara, Hajime Honda
    • Organizer
      第60回日本生物物理学会年会, 函館
    • Related Report
      2022 Annual Research Report
  • [Presentation] 細菌アクチンMreBの繊維構造多型2022

    • Author(s)
      Daichi Takahashi, Ikuko Fujiwara, Akihiro Narita4, Makoto Miyata
    • Organizer
      第60回日本生物物理学会年会, 函館
    • Related Report
      2022 Annual Research Report
  • [Presentation] JasplakinolideまたはPhalloidinが結合したアクチンフィラメントのゆらぎの違いをFRET解析により可視化した2022

    • Author(s)
      Ai Takahashi, Miku Nezasa, Kuruto Toda, Irfan Huzifah Ahmad, Ichiro Nishikata, Kenji Kamimura, Ikuko Fujiwara, Hajime Honda
    • Organizer
      第60回日本生物物理学会年会, 函館
    • Related Report
      2022 Annual Research Report
  • [Presentation] 滑り運動中のアクチン繊維内に沿って生じる局所的な内部コンフォメーション変化とその伝播2022

    • Author(s)
      Kuruto Toda, Hirotaka Itou, Ichiro Nishikata, Kenji Kamimura, Ikuko Fujiwara, Hajime Honda
    • Organizer
      第60回日本生物物理学会年会, 函館
    • Related Report
      2022 Annual Research Report
  • [Presentation] アクチン繊維のQCM測定における独特の周波数シフト2022

    • Author(s)
      Naoki Matsumoto, Honoka Kobayashi, Taiki Nishimura, Yuki Sakurai, Kaito Kobayashi, Kaho Yokomuro, Kazuya Soda, Ikuko Fujiwara, Hajime Honda
    • Organizer
      第60回日本生物物理学会年会, 函館
    • Related Report
      2022 Annual Research Report
  • [Presentation] 細菌アクチンMreBのATP加水分解機構2022

    • Author(s)
      高橋大地, 藤原郁子, 今田勝巳, 宮田真人
    • Organizer
      第45回日本分子生物学会年会, 幕張メッセ
    • Related Report
      2022 Annual Research Report
  • [Presentation] スピロプラズマが持つ細菌アクチンMreB3のATPase活性の構造基盤2022

    • Author(s)
      高橋大地、藤原郁子、今田勝巳、宮田真人
    • Organizer
      第49回日本マイコプラズマ学会学術集会
    • Related Report
      2022 Annual Research Report
  • [Presentation] Filament structural polymorphism of bacterial actin MreB2022

    • Author(s)
      Daichi Takahashi, Ikuko Fujiwara, Makoto Miyata
    • Organizer
      The 22nd Annual Meeting of the Protein Science Society of Japan, Tsukuba Japan
    • Related Report
      2022 Annual Research Report
  • [Presentation] ATP hydrolysis mechanism of bacterial actin MreB2022

    • Author(s)
      Daichi Takahashi, Ikuko Fujiwara, Katsumi Imada, Makoto Miyata
    • Organizer
      生体運動研究合同班会議
    • Related Report
      2022 Annual Research Report
  • [Presentation] ツインフィリン C 末端尾部によるアクチンキャッピングタンパク質制御機構2022

    • Author(s)
      武田修一,小池亮太郎,藤原郁子,成田哲博,宮田真人,太田元規,前田雄一郎
    • Organizer
      生体運動研究合同班会議
    • Related Report
      2021 Research-status Report
  • [Presentation] アクチンの ATP 加水分解反応メカニズム:ADP-Pi 結合型の再発見2022

    • Author(s)
      前田雄一郎,兼松佑典,武田修一,成田哲博,小田俊郎,小池亮太郎,太田元規,岩佐充貞,鷹野優,森次圭,藤原郁子,田中康太郎,永江峰幸,故渡邉信久
    • Organizer
      生体運動研究合同班会議
    • Related Report
      2021 Research-status Report
  • [Presentation] アクチン脱重合でのサブユニット解離の観察に向けて2022

    • Author(s)
      三谷隆大,國田樹,藤原郁子,本多元
    • Organizer
      生体運動研究合同班会議
    • Related Report
      2021 Research-status Report
  • [Presentation] アクチンフィラメントの分子間 FRET を使うとこんな事がわかる。2022

    • Author(s)
      本多元,根笹未来,猿子良太,西方一路,上村健二,藤原郁子
    • Organizer
      生体運動研究合同班会議
    • Related Report
      2021 Research-status Report
  • [Presentation] ATP hydrolysis mechanism of bacterial actin MreB2021

    • Author(s)
      Daichi TAKAHASHI, Ikuko FUJIWARA, Katsumi IMADA, Makoto MIYATA
    • Organizer
      第59回日本生物物理学会
    • Related Report
      2021 Research-status Report
  • [Presentation] Polymerization Dynamics and Structure of MreB Proteins Involved in Spiroplasma Swimming2021

    • Author(s)
      Daichi Takahashi, Ikuko Fujiwara, Katsumi Imada, Makoto Miyata
    • Organizer
      48th IOM (International Organization for Mycoplasmology)
    • Related Report
      2021 Research-status Report
    • Int'l Joint Research
  • [Presentation] Mechanism of ATP hydrolysis in bacterial actin MreB of Spiroplasma2021

    • Author(s)
      Daichi TAKAHASHI, Ikuko FUJIWARA, Katsumi IMADA, Makoto MIYATA
    • Organizer
      蛋白質科学会
    • Related Report
      2021 Research-status Report
  • [Presentation] Structural basis of bacterial actin MreB3 involved in Spiroplasma swimming2021

    • Author(s)
      Daichi TAKAHASHI, Ikuko FUJIWARA, Katsumi IMADA, Makoto MIYATA
    • Organizer
      第94回細菌学会
    • Related Report
      2021 Research-status Report
  • [Presentation] 細菌アクチン MreB の ATP 加水分解機構2021

    • Author(s)
      *高橋大地,藤原郁子,今田勝巳,宮田真人
    • Organizer
      生体運動研究合同班会議
    • Related Report
      2021 Research-status Report
  • [Presentation] Microscopic measurement of the inter molecule FRET-efficiency quantified the local flexibility of single actin filament.2021

    • Author(s)
      Miku Nezasa, Ai Takahashi, Ryota Mashiko, Ichiro Nishikata, Kenji Kamimura, Ikuko Fujiwara, Hajime Honda
    • Organizer
      第44回分子生物学会
    • Related Report
      2021 Research-status Report
  • [Presentation] Estimation of the number of subunits dissociating from a single filament of actin2021

    • Author(s)
      Takahiro Mitani, Itsuki Kunita, Ikuko Fujiwara, Hajime Honda
    • Organizer
      第44回分子生物学会
    • Related Report
      2021 Research-status Report
  • [Presentation] Direct observation of the polymerization and depolymerization inhibitors at the end of actin filaments2021

    • Author(s)
      Ikuko Fujiwara, Hikaru Empuku, Naomi Courtemanche, Thomas D. Pollard, Takahiro Mitani, Moka Ito, Ichiro Nishikata, Miku Nezasa, Kenji Kamimura, Hajime Honda
    • Organizer
      第44回分子生物学会
    • Related Report
      2021 Research-status Report
  • [Presentation] Development of Spiroplasma swimming motor from bacterial actin MreB2021

    • Author(s)
      Daichi Takahashi、Ikuko Fujiwara, Makoto Miyata
    • Organizer
      BLAST XVI online
    • Related Report
      2020 Research-status Report
    • Int'l Joint Research
  • [Presentation] Polymerization of bacterial actin MreB involved in swimming mitility of Spiroplasma eriocheiris2021

    • Author(s)
      Daichi Takahashi、Ikuko Fujiwara, Makoto Miyata
    • Organizer
      BLAST XVI online
    • Related Report
      2020 Research-status Report
    • Int'l Joint Research
  • [Presentation] 螺旋推進する細菌スピロプラズマ内のアクチン様タンパク質MreBの重合観察2020

    • Author(s)
      Ikuko Fujiwara, Daichi Takahashi, Yuhei O. Tahara, Yuya Sasajima, Hana Kiyama, Makoto Miyata
    • Organizer
      第43回日本分子生物学会年会 MBSJ 2020 Online
    • Related Report
      2020 Research-status Report
  • [Presentation] 細菌アクチンMreBからスピロプラズマ遊泳モーターへの進化2020

    • Author(s)
      Daichi Takahashi, Ikuko Fujiwara, Makoto Miyata
    • Organizer
      第58回日本生物物理学会年会 オンライン開催
    • Related Report
      2020 Research-status Report
  • [Presentation] Structures and dynamics of bacterial actin homolog, mreB proteins involved in swimming motility ofSpiroplasma eriocheiris2020

    • Author(s)
      Daichi Takahashi, Ikuko Fujiwara, Katsumi Imada, Makoto Miyata
    • Organizer
      第20回日本タンパク質k学会年会 オンライン開催
    • Related Report
      2020 Research-status Report

URL: 

Published: 2020-04-28   Modified: 2024-01-30  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi