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The bifidobacterial gut colonization strategies based on communication between complex symbiotic intestinal microbes

Research Project

Project/Area Number 20K15438
Research Category

Grant-in-Aid for Early-Career Scientists

Allocation TypeMulti-year Fund
Review Section Basic Section 38020:Applied microbiology-related
Research InstitutionKeio University

Principal Investigator

Nishiyama Keita  慶應義塾大学, 医学部(信濃町), 講師 (40756029)

Project Period (FY) 2020-04-01 – 2022-03-31
Project Status Completed (Fiscal Year 2021)
Budget Amount *help
¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2021: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Fiscal Year 2020: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Keywords腸内細菌 / ビフィズス菌 / 共生 / 代謝産物 / 定着 / 接着 / 線毛 / 感染予防
Outline of Research at the Start

ビフィズス菌はヒト腸内環境の恒常性維持に密接に関わるが,腸内での定着機構は不明な点が多い。申請者は,腸内細菌の相互関係を司る代謝産物に着目し,ヒト便培養液からビフィズス菌の定着因子である線毛の重合反応を誘導する代謝産物AAAを見出した。本研究では,(1)AAA産生菌の分離と同定,(2)AAA産生菌とビフィズス菌のマウス共生モデルを用いた定着試験を実施し,ビフィズス菌の新たな腸内定着機構の証明を目指す。

Outline of Final Research Achievements

The gut microbiome converts aromatic amino acids to several metabolites that potentially regulate biological processes. Here, we show that metabolite 'AAA', produced by intestinal bacteria, upregulates the gene expression of fimbriae of Bifidobacterium, thereby dynamically inducing fimbriae elongation. AAA promoted the intestinal colonization of commensal bacteria, and inhibited the growth of gram-negative pathogenic bacteria through cell membrane disruption. Furthermore, we found that AAA was produced by metabolic exchange between two bacterial species, Bacteroides and Lactobacillus. This study revealed that AAA can act as a signaling molecule that significantly modulates bacterial colonization in the intestine. These findings demonstrate the existence of AAA-mediated trans-species dialogue between microorganisms and provide new insights into understanding the formation and maintenance of human gut microbiota.

Academic Significance and Societal Importance of the Research Achievements

Bifidobacteriumはヒト消化管に生息する共生細菌であり宿主の腸内環境の恒常性維持に密接に関わる。しかし,どのようにしてビフィズス菌はヒト腸内に定着できるのかという疑問に対して不明な点が多い。本研究では,ビフィズス菌の腸管定着因子である線毛発現を誘導する代謝産物AAAを産生する腸内細菌を同定し,ビフィズス菌とこれらの細菌との共生により腸内定着が促進されること,さらにAAAは病原性細菌の生育を抑制する,興味深い共生関係を見出した。これらは,ビフィズス菌の新たな腸内定着機構を明らかにしたと共に,ヒト腸内細菌叢の形成と維持の理解に向けた知見を与えるものと考える。

Report

(3 results)
  • 2021 Annual Research Report   Final Research Report ( PDF )
  • 2020 Research-status Report
  • Research Products

    (10 results)

All 2022 2021 2020

All Journal Article (3 results) (of which Peer Reviewed: 3 results,  Open Access: 3 results) Presentation (7 results) (of which Int'l Joint Research: 1 results,  Invited: 7 results)

  • [Journal Article] シアル酸がもたらす腸内細菌叢への影響と機能2022

    • Author(s)
      西山啓太,向井孝夫
    • Journal Title

      Glycoforum

      Volume: 25 Issue: 2 Pages: A3J

    • DOI

      10.32285/glycoforum.25A3J

    • ISSN
      1349-9416
    • Year and Date
      2022-04-01
    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Roles of the Cell Surface Architecture of Bacteroides and Bifidobacterium in the Gut Colonization2021

    • Author(s)
      Nishiyama Keita、Yokoi Tatsunari、Sugiyama Makoto、Osawa Ro、Mukai Takao、Okada Nobuhiko
    • Journal Title

      Frontiers in Microbiology

      Volume: 12 Pages: 754819-754819

    • DOI

      10.3389/fmicb.2021.754819

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Extracellular Vesicles Produced by Bifidobacterium longum Export Mucin-Binding Proteins2020

    • Author(s)
      Nishiyama Keita、Takaki Takashi、Sugiyama Makoto、Fukuda Itsuko、Aiso Maho、Mukai Takao、Odamaki Toshitaka、Xiao Jin-zhong、Osawa Ro、Okada Nobuhiko
    • Journal Title

      Applied and Environmental Microbiology

      Volume: 86 Issue: 19

    • DOI

      10.1128/aem.01464-20

    • Related Report
      2020 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] Bifidobacteriumの消化管定着に寄与する細胞表層構造物の役割2022

    • Author(s)
      西山啓太
    • Organizer
      第95回日本細菌学会総会
    • Related Report
      2021 Annual Research Report
    • Invited
  • [Presentation] Bacterial-surface protein and gut colonization2022

    • Author(s)
      西山啓太
    • Organizer
      日本農芸化学会2022年度大会
    • Related Report
      2021 Annual Research Report
    • Invited
  • [Presentation] Bacterial-surface architecture and host colonization2021

    • Author(s)
      Keita Nishiyama
    • Organizer
      The 11th Asian Conference for Lactic Acid Bacteria
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 腸内細菌の相互作用を司る代謝産物から紐解くビフィズス菌の消化管定着2021

    • Author(s)
      西山啓太
    • Organizer
      ビフィズス菌研究会設立記念第1回シンポジウム
    • Related Report
      2020 Research-status Report
    • Invited
  • [Presentation] 腸内細菌が産生する代謝産物から紐解く細菌の共生機構2021

    • Author(s)
      西山啓太
    • Organizer
      日本生物工学会東日本支部 賀詞交換会
    • Related Report
      2020 Research-status Report
    • Invited
  • [Presentation] 糖鎖を介した腸内細菌と宿主のクロストーク2020

    • Author(s)
      西山啓太
    • Organizer
      第22回比較グライコーム研究会
    • Related Report
      2020 Research-status Report
    • Invited
  • [Presentation] 第32回日本薬学会生物系薬学部会 微生物シンポジウム2020

    • Author(s)
      西山啓太
    • Organizer
      細菌の共生から紐解く腸内細菌の消化管定着
    • Related Report
      2020 Research-status Report
    • Invited

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Published: 2020-04-28   Modified: 2023-01-30  

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