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Elucidation of structure of plant proteoglycans and its involvement in freezing tolerance

Research Project

Project/Area Number 20K15494
Research Category

Grant-in-Aid for Early-Career Scientists

Allocation TypeMulti-year Fund
Review Section Basic Section 38060:Applied molecular and cellular biology-related
Research InstitutionSaitama University

Principal Investigator

Takahashi Daisuke  埼玉大学, 理工学研究科, 助教 (20784961)

Project Period (FY) 2020-04-01 – 2023-03-31
Project Status Completed (Fiscal Year 2022)
Budget Amount *help
¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2022: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2021: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2020: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Keywords植物 / 凍結耐性 / 低温馴化 / 細胞壁 / プロテオグリカン / アラビノガラクタンタンパク質 / 糖鎖
Outline of Research at the Start

植物が凍結温度に曝されると、細胞外に形成された氷晶の拡大に伴って不可逆的な傷害を負う。したがって、植物の凍結耐性には細胞の最も外側に存在する細胞壁や細胞壁の物理化学的性質が影響すると考えられる。本研究は、細胞壁および細胞膜に存在する糖タンパク質「アラビノガラクタンタンパク質(AGP)」が低温に応答することに着目し、AGPの糖鎖やコアタンパク質の詳細な構造・組成を通じて、AGPが植物の凍結耐性に及ぼす影響を明らかにする。

Outline of Final Research Achievements

The purpose of the present study is to elucidate the function of arabinogalactan protein (AGP), a major plant proteoglycan. AGPs present as plasma membrane-bound and free AGPs were fractionated and the glycan structures of each AGP were estimated. The results suggested that membrane-bound AGPs have more complex side chain structures than free AGPs. Furthermore, glucuronic acid residues in the AG glycan increased when plants were exposed to low temperatures. This may be related to AGP's function as an extracellular calciumu capacitor. These results revealed the cellular localization-specific structure of AG glycan and its environmental responsiveness, whereas only the average structure of AGP was previously known.

Academic Significance and Societal Importance of the Research Achievements

これまで、AGPは糖鎖の構造的多様性や解析の困難さから、その機能や生物的意義は未解明な部分が多かった。本研究により、新たにAGPには局在部位特異的な構造を持っていることが明らかになり、今後のAGPの研究に大きく資する知見を提供できたと考える。また、AGPの糖鎖が温度変化に応答して変化することも明らかになり、植物の持つ環境適応能力をより深く理解する上で、遺伝子やタンパク質のみならず、多糖や糖タンパク質など、より複合的な性質を持つ生体分子にも着目する必要性を提案することができた。このことは、気候変動の進行に伴って望まれる有用作物の、環境応答能力の向上にも資する基盤的知見であると考える。

Report

(4 results)
  • 2022 Annual Research Report   Final Research Report ( PDF )
  • 2021 Research-status Report
  • 2020 Research-status Report
  • Research Products

    (37 results)

All 2023 2022 2021 2020 Other

All Int'l Joint Research (5 results) Journal Article (10 results) (of which Int'l Joint Research: 8 results,  Open Access: 9 results,  Peer Reviewed: 9 results) Presentation (21 results) (of which Int'l Joint Research: 3 results,  Invited: 3 results) Book (1 results)

  • [Int'l Joint Research] La Trobe Univerisity(オーストラリア)

    • Related Report
      2022 Annual Research Report
  • [Int'l Joint Research] La Trobe Univeristy(オーストラリア)

    • Related Report
      2021 Research-status Report
  • [Int'l Joint Research] United States Department of Agriculture(米国)

    • Related Report
      2021 Research-status Report
  • [Int'l Joint Research] La Trobe Univeristy(オーストラリア)

    • Related Report
      2020 Research-status Report
  • [Int'l Joint Research] United States Department of Agriculture(米国)

    • Related Report
      2020 Research-status Report
  • [Journal Article] Cross‐disciplinary insights into the mechanisms of plant cold hardiness: From molecules to ecosystems2023

    • Author(s)
      Charrier Guillaume、Willick Ian R.、Takahashi Daisuke
    • Journal Title

      Physiologia Plantarum

      Volume: 175 Issue: 2

    • DOI

      10.1111/ppl.13901

    • Related Report
      2022 Annual Research Report
    • Open Access / Int'l Joint Research
  • [Journal Article] LSPpred Suite: Tools for Leaderless Secretory Protein Prediction in Plants2023

    • Author(s)
      Lonsdale Andrew、Ceballos-Laita Laura、Takahashi Daisuke、Uemura Matsuo、Abadia Javier、Davis Melissa J.、Bacic Antony、Doblin Monika S.
    • Journal Title

      Plants

      Volume: 12 Issue: 7 Pages: 1428-1428

    • DOI

      10.3390/plants12071428

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Temporal cell wall changes during cold acclimation and deacclimation and their potential involvement in freezing tolerance and growth2022

    • Author(s)
      Kutsuno Tatsuya、Chowhan Sushan、Kotake Toshihisa、Takahashi Daisuke
    • Journal Title

      Physiologia Plantarum

      Volume: 175 Issue: 1

    • DOI

      10.1111/ppl.13837

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] In vivo structural modification of type II arabinogalactans with fungal endo-β-1, 6-galactanase in Arabidopsis2022

    • Author(s)
      Kikuchi Aina、Hara Katsuya、Yoshimi Yoshihisa、Soga Kouichi、Takahashi Daisuke、Kotake Toshihisa
    • Journal Title

      Frontiers in Plant Science

      Volume: 13 Pages: 1010492-1010492

    • DOI

      10.3389/fpls.2022.1010492

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Plasma membrane proteomic changes of Arabidopsis DRP1E during cold acclimation in association with the enhancement of freezing tolerance2022

    • Author(s)
      Watanabe Etsuko、Kondo Mariko、Kamal Md Mostafa、Uemura Matsuo、Takahashi Daisuke、Kawamura Yukio
    • Journal Title

      Physiologia Plantarum

      Volume: 174 Issue: 6

    • DOI

      10.1111/ppl.13820

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Effects of Fe and Mn deficiencies on the root protein profiles of tomato (Solanum lycopersicum) using two-dimensional electrophoresis and label-free shotgun analyses2022

    • Author(s)
      Ceballos-Laita L, Takahashi D, Uemura M, Abadia J, Lopez-Millan AF, Rodriguez-Celma J.
    • Journal Title

      International Journal of Molecular Sciences

      Volume: 23 Issue: 7 Pages: 3719-3719

    • DOI

      10.3390/ijms23073719

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Responses of the Plant Cell Wall to Sub-Zero Temperatures: A Brief Update2021

    • Author(s)
      Takahashi Daisuke、Willick Ian R、Kasuga Jun、Livingston III David P
    • Journal Title

      Plant and Cell Physiology

      Volume: 62 Issue: 12 Pages: 1858-1866

    • DOI

      10.1093/pcp/pcab103

    • Related Report
      2021 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Galactoglucomannan structure of Arabidopsis seed‐coat mucilage in <scp>GDP</scp> ‐mannose synthesis impaired mutants2021

    • Author(s)
      Nishigaki Naho、Yoshimi Yoshihisa、Kuki Hiroaki、Kunieda Tadashi、Hara‐Nishimura Ikuko、Tsumuraya Yoichi、Takahashi Daisuke、Dupree Paul、Kotake Toshihisa
    • Journal Title

      Physiologia Plantarum

      Volume: 173 Issue: 3 Pages: 1244-1252

    • DOI

      10.1111/ppl.13519

    • Related Report
      2021 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Cell wall modification by the xyloglucan endotransglucosylase/hydrolase XTH19 influences freezing tolerance after cold and sub‐zero acclimation2021

    • Author(s)
      Takahashi Daisuke、Johnson Kim L.、Hao Pengfei、Tuong Tan、Erban Alexander、Sampathkumar Arun、Bacic Antony、Livingston David P.、Kopka Joachim、Kuroha Takeshi、Yokoyama Ryusuke、Nishitani Kazuhiko、Zuther Ellen、Hincha Dirk K.
    • Journal Title

      Plant, Cell & Environment

      Volume: 44 Issue: 3 Pages: 915-930

    • DOI

      10.1111/pce.13953

    • Related Report
      2020 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Structural features conserved in subclass of type II arabinogalactan2020

    • Author(s)
      Ito Kengo、Fukuoka Kurumi、Nishigaki Naho、Hara Katsuya、Yoshimi Yoshihisa、Kuki Hiroaki、Takahashi Daisuke、Tsumuraya Yoichi、Kotake Toshihisa
    • Journal Title

      Plant Biotechnology

      Volume: 37 Issue: 4 Pages: 459-463

    • DOI

      10.5511/plantbiotechnology.20.0721a

    • NAID

      130007960244

    • ISSN
      1342-4580, 1347-6114
    • Year and Date
      2020-12-25
    • Related Report
      2020 Research-status Report
    • Peer Reviewed
  • [Presentation] Changes in soluble sugars and cell wall in wheat cultivars during cold acclimation.2023

    • Author(s)
      Chowhan S,Kutsuno T,Handa H,Kotake T,Takahashi D
    • Organizer
      日本植物生理学会
    • Related Report
      2022 Annual Research Report
  • [Presentation] Function of KONAJC1 protein in the synthesis of L-ascorbic acid.2023

    • Author(s)
      Miyagawa M,Takahashi D,Kotake T
    • Organizer
      日本植物生理学会
    • Related Report
      2022 Annual Research Report
  • [Presentation] ペクチンのアラビナン側鎖の細胞接着における役割.2022

    • Author(s)
      樋口慶太,曽我康一,金子康子,九鬼寛明,高橋大輔,小竹敬久
    • Organizer
      日本植物学会
    • Related Report
      2022 Annual Research Report
  • [Presentation] デンドロビウムのグルコマンナンのアセチル化に関するTBLファミリータンパク質.2022

    • Author(s)
      菊地愛菜,西垣南歩,小野真央,石水毅,Tsai Wen-Chieh,Yeh Chuan-Ming,高橋大輔,小竹敬久
    • Organizer
      日本植物学会
    • Related Report
      2022 Annual Research Report
  • [Presentation] シロイヌナズナの低温馴化および脱馴化過程における細胞壁変化の統合的解析2022

    • Author(s)
      久津野達也,小竹敬久,高橋大輔
    • Organizer
      低温生物工学会
    • Related Report
      2022 Annual Research Report
  • [Presentation] Acetylated glucomannan in Dendrobium catenatum2022

    • Author(s)
      Naho Nishigaki,Aina Kikuchi,Mao Ono,Daisuke Takahashi,Takeshi Ishimizu,Toshihisa Kotake
    • Organizer
      IX Cell Wall Research Conference
    • Related Report
      2022 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Cold acclimation process induces accumulation of pectic galactan, which enhances freezing tolerance2022

    • Author(s)
      Daisuke Takahashi,Kazuma Sasaki,Tatsuya Kutsuno,Kim Johnson,Arun Sampathkumar,Antony Bacic,Ellen Zuther,Kotake Toshihisa
    • Organizer
      IX Cell Wall Research Conference
    • Related Report
      2022 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Contribution of galactan to the mechanism of plant adaptation to freezing2022

    • Author(s)
      Daisuke Takahashi
    • Organizer
      Scandinavian Plant Physiology Society&Physiologia Plantarum Webinar series “Cold Tolerance & Adaptation”
    • Related Report
      2022 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 植物の凍結適応メカニズム:細胞壁の観点から2022

    • Author(s)
      高橋大輔
    • Organizer
      日本森林学会
    • Related Report
      2021 Research-status Report
    • Invited
  • [Presentation] The function of FLA8 in cold acclimation and freezing tolerance acquisition mechanism2022

    • Author(s)
      Yukino Shibasaki, Kim Johnson, Antony Bacic, Toshihisa Kotake, Daisuke Takahashi
    • Organizer
      日本植物生理学会
    • Related Report
      2021 Research-status Report
  • [Presentation] 膜結合型及び遊離型AGP の構造と低温応答性2021

    • Author(s)
      沼尾悠太, 円谷陽一, 小竹敬久, 高橋大輔
    • Organizer
      日本植物学会
    • Related Report
      2021 Research-status Report
  • [Presentation] シロイヌナズナにおける二つ目のUDP-L-アラビノース合成経路2021

    • Author(s)
      梅澤輝, 中澤小夏, 伏信進矢, 西垣南歩, 円谷陽一, 高橋大輔, 小竹敬久
    • Organizer
      日本植物生理学会2020年度年会
    • Related Report
      2020 Research-status Report
  • [Presentation] Pleiotropic changes of arabinogalactan proteins during cold acclimation treatment.2021

    • Author(s)
      Takahashi D, Numao Y, Shibasaki Y, Tsumuraya Y, Kotake T
    • Organizer
      日本植物生理学会2020年度年会
    • Related Report
      2020 Research-status Report
  • [Presentation] 植物の低温応答と凍結耐性獲得機構ー細胞壁の観点からー2020

    • Author(s)
      高橋大輔
    • Organizer
      令和2年度 日本応用糖質科学会 東日本支部ミニシンポジウム
    • Related Report
      2020 Research-status Report
    • Invited
  • [Presentation] 植物の凍結適応過程で起こる細胞壁変化2020

    • Author(s)
      高橋大輔
    • Organizer
      埼玉大学・岡山大学若手合同シンポジウム
    • Related Report
      2020 Research-status Report
  • [Presentation] 植物の低温・氷点下温度馴化過程で起こる細胞壁成分変化の解析2020

    • Author(s)
      高橋大輔, Kim Johnson, Antony Bacic, 曽我康一, Arun Sampathkumar, Ellen Zuther, 小竹敬久, Dirk K. Hincha
    • Organizer
      日本植物学会第84回大会
    • Related Report
      2020 Research-status Report
  • [Presentation] シロイヌナズナmur1-1胚軸をモデルとした細胞壁の化学/物理学的特性の解析2020

    • Author(s)
      九鬼寛明, 曽我康一, 西垣南歩, 竹中悠人, 山口雅利, 石水毅, 高橋大輔, 小竹敬久
    • Organizer
      日本植物学会第84回大会
    • Related Report
      2020 Research-status Report
  • [Presentation] KONJAC タンパク質がビタミンC合成に与える影響2020

    • Author(s)
      阿部桃太, 宮川萌, 西垣南歩, 山梨優貴子, 杢屋公介, 円谷陽一, 高橋大輔, 小竹 敬久
    • Organizer
      日本植物学会第84回大会
    • Related Report
      2020 Research-status Report
  • [Presentation] KONJACタンパク質のグルコマンナン合成における役割.2020

    • Author(s)
      西垣南歩, 吉見圭永, 國枝正, 高橋大輔, 円谷陽一, 小竹敬久
    • Organizer
      日本植物学会第84回大会
    • Related Report
      2020 Research-status Report
  • [Presentation] UDP-L-アラビノース合成系の起源と生理的意義の解明.2020

    • Author(s)
      梅澤輝, 曳田優, 松村理奈, 西垣南歩, 高橋大輔, 円谷陽一, 小竹 敬久
    • Organizer
      日本植物学会第84回大会
    • Related Report
      2020 Research-status Report
  • [Presentation] シロイヌナズナにおけるファシクリン様アラビノガラクタンタンパク質遺伝子の低温応答性2020

    • Author(s)
      高橋大輔, 柴崎由季乃, 小竹敬久
    • Organizer
      第65回 低温生物工学会年会
    • Related Report
      2020 Research-status Report
  • [Book] Plant Cold Acclimation. Methods in Molecular Biology2020

    • Author(s)
      Daisuke Takahashi、Ellen Zuther、Dirk K. Hincha
    • Total Pages
      336
    • Publisher
      Springer Science+Business Media, LLC
    • ISBN
      9781071606605
    • Related Report
      2020 Research-status Report

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Published: 2020-04-28   Modified: 2024-01-30  

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