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Studying the dynamics of a novel small RNA (tiRNA) generation in glioma; possible new therapy

Research Project

Project/Area Number 20K16323
Research Category

Grant-in-Aid for Early-Career Scientists

Allocation TypeMulti-year Fund
Review Section Basic Section 50010:Tumor biology-related
Research InstitutionTohoku University

Principal Investigator

Rashad Sherif  東北大学, 医学系研究科, 助教 (00824088)

Project Period (FY) 2020-04-01 – 2023-03-31
Project Status Completed (Fiscal Year 2022)
Budget Amount *help
¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2022: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2021: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2020: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
KeywordstRNA modifications / Glioma / oxidative stress / tRNA cleavage / Stroke / tRNA / CRISPR / Chemotherapy / translation / Cell Stress / Cell stress
Outline of Research at the Start

tiRNAs are new small non-coding RNA molecules produced via tRNA cleavage by angiogenin cellular stress. tiRNAs were detected in the plasma of patients with malignancies, but their functional role is not yet explored in glioma or other malignancies to date. I hypothesize that targeting tiRNA generation machinery can be valuable as a therapeutic target for glioma. The aim of this work is to study the dynamics and function of tiRNA in glioma cells and their responses to chemotherapy.

Outline of Final Research Achievements

In this work, I was able to identify a non-canonical Angionenin-independent tRNA cleavage pattern that occurs in vitro and in vivo. I was also able to identify the role of tRNA methylation in driving this tRNA cleavage pattern. Further, I identified the role of a tRNA modifying enzyme, Alkbh1, in glioma pathology. Alkbh1 is associated with worse outcomes in glioma patients. Overexpressing Alkbh1 led to induction of glioma stemness, and upregulation of various genes associated with immune functions of glioma and interaction with neurons. Alkbh1 overexpression also led to more resistance to ROS induced senescence and resistance to oxidative stressors. These findings indicate that Alkbh1 is an important target for glioma therapy that should be targeted to improve outcome.

Academic Significance and Societal Importance of the Research Achievements

Understanding the epitranscriptional processes that govern cellular responses to oxidative stress are important for understanding many diseases, including cancer. The results of this work can help design novel therapies to manipulate tRNA modifications and cleavage and imrpove glioma outcome.

Report

(4 results)
  • 2022 Annual Research Report   Final Research Report ( PDF )
  • 2021 Research-status Report
  • 2020 Research-status Report
  • Research Products

    (5 results)

All 2022 2021

All Journal Article (5 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 2 results,  Open Access: 1 results)

  • [Journal Article] Codon Usage and mRNA Stability are Translational Determinants of Cellular Response to Canonical Ferroptosis Inducers2022

    • Author(s)
      Rashad Sherif、Byrne Shane R、Saigusa Daisuke、Xiang Jingdong、Zhou Yuan、Zhang Liyin、Begley Thomas J、Tominaga Teiji、Niizuma Kuniyasu
    • Journal Title

      Neuroscience

      Volume: 501 Pages: 103-130

    • DOI

      10.1016/j.neuroscience.2022.08.009

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] RNF213 loss of function reshapes vascular transcriptome and spliceosome leading to disrupted angiogenesis and aggravated vascular inflammatory responses2022

    • Author(s)
      Zhang Liyin、Rashad Sherif、Zhou Yuan、Niizuma Kuniyasu、Tominaga Teiji
    • Journal Title

      Journal of Cerebral Blood Flow & Metabolism

      Volume: 42 Issue: 11 Pages: 2107-2122

    • DOI

      10.1177/0271678x221110679

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] The cell and stress‐specific canonical and noncanonical tRNA cleavage2021

    • Author(s)
      Sherif Rashad, Teiji Tominaga, Kuniyasu Niizuma
    • Journal Title

      Journal of Cellular Physiology

      Volume: 236 Issue: 5 Pages: 3710-3724

    • DOI

      10.1002/jcp.30107

    • Related Report
      2021 Research-status Report 2020 Research-status Report
  • [Journal Article] Mature Neurons’ sensitivity to oxidative stress is epigenetically programmed by alternative splicing and mRNA stability2021

    • Author(s)
      Yuan Zhou, Sherif Rashad, Teiji Tominaga, Kuniyasu Niizuma
    • Journal Title

      Biorxiv preprint

      Volume: 00 Pages: 00-00

    • DOI

      10.1101/2021.12.25.472549

    • Related Report
      2021 Research-status Report
  • [Journal Article] Epigenetic regulation of translation repression in ferroptosis, and a role of Alternative splicing and tRNA methylation2021

    • Author(s)
      Sherif Rashad, Daisuke Saigusa, Yuan Zhou, Liyin Zhang, Teiji Tominaga, Kuniyasu Niizuma
    • Journal Title

      Biorxiv preprint

      Volume: 00 Pages: 00-00

    • DOI

      10.1101/2021.11.10.468143

    • Related Report
      2021 Research-status Report

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Published: 2020-04-28   Modified: 2024-01-30  

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