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Development and validation of mathematical model of nanomedicine for cancer treatment by using zebrafish

Research Project

Project/Area Number 20K20532
Research Category

Grant-in-Aid for Challenging Research (Pioneering)

Allocation TypeMulti-year Fund
Review Section Medium-sized Section 19:Fluid engineering, thermal engineering, and related fields
Research InstitutionThe University of Tokyo

Principal Investigator

Hasegawa Yosuke  東京大学, 生産技術研究所, 教授 (30396783)

Co-Investigator(Kenkyū-buntansha) 中嶋 洋行  国立研究開発法人国立循環器病研究センター, 研究所, 室長 (10467657)
Project Period (FY) 2020-07-30 – 2024-03-31
Project Status Completed (Fiscal Year 2023)
Budget Amount *help
¥25,740,000 (Direct Cost: ¥19,800,000、Indirect Cost: ¥5,940,000)
Fiscal Year 2023: ¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2022: ¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2021: ¥5,850,000 (Direct Cost: ¥4,500,000、Indirect Cost: ¥1,350,000)
Fiscal Year 2020: ¥10,010,000 (Direct Cost: ¥7,700,000、Indirect Cost: ¥2,310,000)
Keywords血流シミュレーション / ナノメディシン / ライブイメージング / ゼブラフィッシュ / セブラフィッシュ
Outline of Research at the Start

本研究では,胚が透明であり,生体内輸送現象のライブイメージングが可能である,ゼブラフィッシュを用いて,がん細胞,その周辺の血管構造,血流分布,ナノ粒子の輸送・集積過程の同時計測を行う.更に,複雑な血管網内部における血流と血球の連成シミュレーション,血管内壁や細胞間質における輸送プロセスのモデリングを実施し,上述の実験から得られるライブイメージングとの詳細な比較を通じて,生体内ナノ粒子輸送の数理モデルを構築する.最終的には,ナノ粒子のサイズ,形状,物理化学的性質を最適化する数理設計ツールを構築を目指す..

Outline of Final Research Achievements

We developed a new methodology to reconstruct three-dimensional complex vascular network from a series of two-dimensional confocal microscope images taken from young zebrafish. The reconstructed three-dimensional structure and the movies of red blood cells at the two-dimensional planes are integrated into deep neural network for estimating the three-dimensional velocity field inside the vascular network. We have also established dissipative particle dynamics (DPD) simulation, and validated its capability of predicting complex interaction between red blood cells and plasma by comparing with experimental data. We also coated nano particles by PEG with different lengths, and demonstrated the possibility of controlling the residence time of nano particles in the blood flow, and thereby providing them the opportunity to reach a target tissue. The present experimental and numerical methods will be useful for the optimal design of nano particles used in the future drag delivery systems.

Academic Significance and Societal Importance of the Research Achievements

これまで毛細血管内部における赤血球や血漿の相互作用やナノ粒子の挙動については、十分な知識が得られておらず、そのことが狙った患部に薬剤を選択的に届けるドラッグデリバリーシステムの確立の大きな障害となっていた。本研究では、ライブイメージングが可能なゼブラフィッシュを生体モデルとして、その内部にナノ粒子を注入し、その血管内の流動特性を直接観察する技術を構築するとともに、赤血球の動力学を考慮した数理モデルの構築、および計算コードの開発を実施した。本研究で構築したツールは、ドラッグデリバリーシステム構築のためのナノ粒子最適設計に大きく貢献することが期待される。

Report

(5 results)
  • 2023 Annual Research Report   Final Research Report ( PDF )
  • 2022 Research-status Report
  • 2021 Research-status Report
  • 2020 Research-status Report
  • Research Products

    (35 results)

All 2024 2023 2022 2021 2020 Other

All Int'l Joint Research (4 results) Journal Article (12 results) (of which Int'l Joint Research: 5 results,  Peer Reviewed: 10 results,  Open Access: 11 results) Presentation (17 results) (of which Int'l Joint Research: 10 results,  Invited: 2 results) Book (2 results)

  • [Int'l Joint Research] The Pennsylvania State University/Brown University(米国)

    • Related Report
      2023 Annual Research Report
  • [Int'l Joint Research] ブラウン大学/ペンシルベニア州立大学(米国)

    • Related Report
      2021 Research-status Report
  • [Int'l Joint Research] ペンシルベニア州立大学/ブラウン大学(米国)

    • Related Report
      2020 Research-status Report
  • [Int'l Joint Research] マックス・プランク研究所(ドイツ)

    • Related Report
      2020 Research-status Report
  • [Journal Article] Angpt1 binding to Tie1 regulates the signaling required for lymphatic vessel development in zebrafish.2024

    • Author(s)
      Morooka N., Gui N., Ando K., Sako K., Fukumoto M., Hasegawa U., Hussmann M., Schulte-Merker S., Mochizuki N., Nakajima H.
    • Journal Title

      Development

      Volume: in press

    • DOI

      10.1101/2023.08.16.553481

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Endoderm-derived islet1-expressing cells differentiate into endothelial cells to function as the vascular HSPC niche in zebrafish2023

    • Author(s)
      Hiroyuki Nakajima, Hiroyuki Ishikawa, Takuya Yamamoto, Ayano Chiba, Hajime Fukui, Keisuke Sako, Moe Fukumoto, Kenny Mattonet, Hyouk-Bum Kwon, Subhra P Hui, Gergana D Dobreva, Kazu Kikuchi, Christian S M Helker, Didier Y R Stainier, Naoki Mochizuki
    • Journal Title

      Developmental Cell

      Volume: 58 Issue: 3 Pages: 224-238

    • DOI

      10.1016/j.devcel.2022.12.013

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Heat transfer and pressure loss characteristics of an offset fin with oblique waves2023

    • Author(s)
      Gong, J., Onishi, J., Komatsu, Y., Mao, N., Kametani, Y., Hasegawa, Y., Shikazono, N.
    • Journal Title

      International Journal of Heat and Mass Transfer

      Volume: 200 Pages: 123522-123522

    • DOI

      10.1016/j.ijheatmasstransfer.2022.123522

    • Related Report
      2022 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Investigation of the vibration-induced local flow around a micro-pillar under various vibration conditions2023

    • Author(s)
      Kaneko, K., Huang, Z., Sato, T., Ujikawa, N., Hayakawa, T., Hasegawa, Y., Suzuki, H.
    • Journal Title

      Mechanical Engineering Journal

      Volume: 10 Issue: 1 Pages: 22-00223-22-00223

    • DOI

      10.1299/mej.22-00223

    • ISSN
      2187-9745
    • Related Report
      2022 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Multiscale Parareal Algorithm for Long-Time Mesoscopic Simulation of Microvessel Blood Flow in Zebrafish2021

    • Author(s)
      Blumers, A. L., Yin, M., Hasegawa, Y., Li, Z., Karniadakis, G. E.
    • Journal Title

      Computational Mechanics

      Volume: 68 Issue: 5 Pages: 1131-1152

    • DOI

      10.1007/s00466-021-02062-w

    • Related Report
      2021 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Numerical evaluation reveals the effect of branching morphology on vessel transport properties during angiogenesis2021

    • Author(s)
      Mirzapour-shafiyi, F., Kametani, Y., Hikita, T., Hasegawa, Y., Nakayama, M.
    • Journal Title

      PLOS Computational Biology

      Volume: June 16 Issue: 6 Pages: 1-16

    • DOI

      10.1371/journal.pcbi.1008398

    • Related Report
      2021 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] 計測とシミュレーションの融合による熱流動場の推定2021

    • Author(s)
      長谷川 洋介
    • Journal Title

      機械の研究

      Volume: 73 Pages: 911-918

    • Related Report
      2021 Research-status Report
  • [Journal Article] Numerical evaluation reveals the effect of branching morphology on vessel transport properties during angiogenesis2021

    • Author(s)
      F. Mirzapour-shafiyi, Y. Kametani, T. Hikita, Y. Hasegawa, M. Nakayama
    • Journal Title

      Plos Computational Biology

      Volume: accepted Pages: 1-28

    • Related Report
      2020 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Multiscale parareal algorithm for long-time mesoscopic simulations of microvascular blood flow in Zebrafish2021

    • Author(s)
      A. Blumers, M. Yin, H. Nakajima, Y. Hasegawa, Z. Li, G. E. Karniadakis
    • Journal Title

      arXiv

      Volume: 2101.08414 Pages: 1-25

    • Related Report
      2020 Research-status Report
    • Open Access / Int'l Joint Research
  • [Journal Article] Dissimilar heat transfer enhancement in a fully developed laminar channel flow subjected to a traveling wave-like wall blowing and suction2021

    • Author(s)
      Kaithakkal Arjun J.、Kametani Yukinori、Hasegawa Yosuke
    • Journal Title

      International Journal of Heat and Mass Transfer

      Volume: 164 Pages: 120485-120485

    • DOI

      10.1016/j.ijheatmasstransfer.2020.120485

    • Related Report
      2020 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Heat transfer enhancement and pressure loss in a plate-fin heat exchanger with V-shaped oblique wavy surface2020

    • Author(s)
      Gong Jiaming、Onishi Junya、He An、Kametani Yukinori、Hasegawa Yosuke、Shikazono Naoki
    • Journal Title

      International Journal of Heat and Mass Transfer

      Volume: 161 Pages: 120263-120263

    • DOI

      10.1016/j.ijheatmasstransfer.2020.120263

    • Related Report
      2020 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] A new framework for design and validation of complex heat transfer surfaces based on adjoint optimization and rapid prototyping technologies2020

    • Author(s)
      KAMETANI Yukinori、FUKUDA Yutaka、OSAWA Takayuki、HASEGAWA Yosuke
    • Journal Title

      Journal of Thermal Science and Technology

      Volume: 15 Issue: 2 Pages: JTST0016-JTST0016

    • DOI

      10.1299/jtst.2020jtst0016

    • NAID

      130007883960

    • ISSN
      1880-5566
    • Related Report
      2020 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] Impact of chain mobility of surface-grafted hydrophilic polymers on nanoparticle interaction with scavenger endothelial cells2024

    • Author(s)
      Amira Ben Mabrouk, Christy George, Vivek Kumar, Binru Han, Hiroyuki Nakajima, Yosuke Hasegawa, Urara Hasegawa
    • Organizer
      2024 American Chemical Society Middle Atlantic Regional Meeting
    • Related Report
      2023 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Predicting the blood flow in zebrafish hindbrain with multiple planes RBCs signal using Artificial Intelligence Velocimetry (AIV)2023

    • Author(s)
      Kumar, V., Nakakura, M., Kumar, P., Nakajima, H., Hasegawa, Y., Karniadakis, G.E.
    • Organizer
      10th International and 50th National Conference on Fluid Mechan ics and Fluid Power (FMFP)
    • Related Report
      2023 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 1D Vascular Network Analysis of Zebrafish Hindbrain Using Physics-Informed Neural Network and its validation2023

    • Author(s)
      Sekine, S., Kumar, V., Nakajima, H., Hasegawa, Y.
    • Organizer
      日本流体力学会年会2023
    • Related Report
      2023 Annual Research Report
  • [Presentation] ゼブラフィッシュにおける赤血球の動力学を考慮した散逸粒子動力学法による血流シミュレーション2023

    • Author(s)
      冨澤駿、Vivek Kumar, 中嶋洋行、Zhen Li, 長谷川洋介
    • Organizer
      CVMW2023
    • Related Report
      2023 Annual Research Report
    • Invited
  • [Presentation] ゼブラフィッシュにおける赤血球の動力学を考慮した血流シミュレーション2023

    • Author(s)
      冨澤駿, 中嶋洋行, 長谷川洋介
    • Organizer
      第8回血管生物医学会 若手研究会
    • Related Report
      2023 Annual Research Report
  • [Presentation] 毛細血管網裏モデリング機構解明のためのゼブラフィッシュ脳内血行力学1次元モデル解析2023

    • Author(s)
      関根彰吾, 中嶋洋行, 長谷川洋介
    • Organizer
      第8回血管生物医学会 若手研究会
    • Related Report
      2023 Annual Research Report
  • [Presentation] Artificial Intelligence Velocimetry for Unsteady Blood Flow Prediction in the Basilar Artery of a Young Zebrafish2022

    • Author(s)
      Vivek Kumar, Shengze Cai, Mitsuho Nakakura, Hiroyuki Nakajima, George Em Karniadakis, Yosuke Hasegawa
    • Organizer
      9th World Congress of Biomechanics (WCB-2022)
    • Related Report
      2022 Research-status Report
    • Int'l Joint Research
  • [Presentation] Detection of nanoparticles in a minute sample using the vibration induced flow2022

    • Author(s)
      Kanji Kaneko, Mamiko Tsugane, Taku Sato, Takeshi Hayakawa, Yosuke Hasegawa, and Hiroaki Suzuki
    • Organizer
      The 17th IEEE International Conference on Nano/Micro Engineered & Molecular Systems (IEEE-NEMS 2022)
    • Related Report
      2022 Research-status Report
    • Int'l Joint Research
  • [Presentation] Numerical simulation of vibration-induced mixer using a cylindrical pillar with various vibration directions2022

    • Author(s)
      Kanji Kaneko, Takeshi Hayakawa, Yosuke Hasegawa, and Hiroaki Suzuki
    • Organizer
      APCOT 2022
    • Related Report
      2022 Research-status Report
    • Int'l Joint Research
  • [Presentation] NUMERICAL STUDY OF THE VIBRATION-INDUCED CHAOTIC MIXER BASED ON VIBRATION SWITCHING2022

    • Author(s)
      Kanji Kaneko, Yosuke Hasegawa, Takeshi Hayakawa, and Hiroaki Suzuki
    • Organizer
      The 26h International Conference on Miniaturized Systems for Chemistry and Life Sciences (MicroTAS) 2022
    • Related Report
      2022 Research-status Report
    • Int'l Joint Research
  • [Presentation] Detection and Quantification of Nanoparticles Using the Vibration-Induced Flow2022

    • Author(s)
      Kanji Kaneko, Mamiko Tsugane, Taku Sato, Yosuke Hasegawa, Takeshi Hayakawa, and Hiroaki Suzuki
    • Organizer
      MHS2022
    • Related Report
      2022 Research-status Report
    • Int'l Joint Research
  • [Presentation] NUMERICAL CHARACTERIZATION OF THE VIBRATION-INDUCED FLOW IN VARIOUS CONDITIONS2022

    • Author(s)
      Zhitai HUANG, Kanji KANEKO, Yuto ASADA, Yosuke HASEGAWA, Takeshi HAYAKAWA, Hiroaki SUZUKI
    • Organizer
      The 26h International Conference on Miniaturized Systems for Chemistry and Life Sciences (MicroTAS) 2022
    • Related Report
      2022 Research-status Report
    • Int'l Joint Research
  • [Presentation] NUMERICAL INVESTIGATION OF THE VIBRATION-INDUCED CHAOTIC MIXING UNDER RECTILINEAR VIBRATIONS2022

    • Author(s)
      Kanji Kaneko, Yosuke Hasegawa, Takeshi Hayakawa, and Hiroaki Suzuki
    • Organizer
      Serendipity Workshop 2022
    • Related Report
      2022 Research-status Report
    • Int'l Joint Research
  • [Presentation] Application of Measurement Data Fusion Simulation to Vascular Biology2022

    • Author(s)
      Hasegawa, Y.
    • Organizer
      Cardiovascular and Metabolic Week 2022 (CVMW2022)
    • Related Report
      2022 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] 血管生物学と熱流体工学2022

    • Author(s)
      長谷川洋介
    • Organizer
      第7回血管生物医学会若手研究会
    • Related Report
      2021 Research-status Report
  • [Presentation] 人工知能速度測定を用いたゼブラフィッシュ後脳基底動脈の血流推定2021

    • Author(s)
      Kumar, V., Cai, S., 中倉満帆,中嶋洋行,Karniadakis, G., 長谷川洋介
    • Organizer
      日本流体力学会年会2021
    • Related Report
      2021 Research-status Report
  • [Presentation] ゼブラフィッシュ脳内血管網における生体ライブイメージングを用いた1次元血流モデルの検証2020

    • Author(s)
      中倉満帆,M. Yin,中嶋洋行,G.E. Karniadakis,長谷川洋介
    • Organizer
      日本流体力学会年会2020
    • Related Report
      2020 Research-status Report
  • [Book] マイクロ・ナノ熱工学の進展 (分担執筆: 第4篇 第3章 第4節 生体内血管網の輸送特性と分岐形態最適化)2021

    • Author(s)
      長谷川 洋介, 中山 雅敬
    • Total Pages
      8
    • Publisher
      (株)エヌ・ティー・エス
    • ISBN
      9784860437220
    • Related Report
      2021 Research-status Report
  • [Book] マイクロ・ナノ熱工学の進展 (第4篇3章(4)「生体内毛細血管網の輸送特性と分岐形態最適化」)2021

    • Author(s)
      長谷川洋介,中山雅敬(分担執筆)
    • Total Pages
      8
    • Publisher
      エヌ・ティー・エス
    • ISBN
      9784860437220
    • Related Report
      2020 Research-status Report

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Published: 2020-08-03   Modified: 2025-01-30  

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