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Genome-wide mapping of cis-regulatory elements conserved in vertebrates

Research Project

Project/Area Number 21200064
Research Category

Grant-in-Aid for Scientific Research on Innovative Areas (Research a proposed research project)

Allocation TypeSingle-year Grants
Research Field Developmental biology
Genetics/Genome dynamics
Research InstitutionNara Institute of Science and Technology

Principal Investigator

OGINO Hajime  奈良先端科学技術大学院大学, バイオサイエンス研究科, 研究チーム長 (10273856)

Co-Investigator(Renkei-kenkyūsha) OCHI Haruki  山形大学, 医学部・教育研究支援センター, 助教 (00505787)
Project Period (FY) 2009 – 2011
Project Status Completed (Fiscal Year 2011)
Budget Amount *help
¥30,940,000 (Direct Cost: ¥23,800,000、Indirect Cost: ¥7,140,000)
Fiscal Year 2011: ¥10,010,000 (Direct Cost: ¥7,700,000、Indirect Cost: ¥2,310,000)
Fiscal Year 2010: ¥10,010,000 (Direct Cost: ¥7,700,000、Indirect Cost: ¥2,310,000)
Fiscal Year 2009: ¥10,920,000 (Direct Cost: ¥8,400,000、Indirect Cost: ¥2,520,000)
Keywordsゲノム / 遺伝子 / 発現制御 / 発生・分化 / 比較ゲノム / 進化
Research Abstract

We performed cis-regulatory analyses of genes involved in development and disease in a genome-wide manner, using comparative genomics approach and an efficient transgenesis technique in Xenopus. Conserved enhancers were identified in a variety of genes including Pax family and Polycomb-related genes. Furthermore, comparative functional analysis between the vertebrate and amphioxus cis-regulatory elements revealed that silencer innovation, rather than enhancer degeneration, was crucial for the diversification of paralog expression during vertebrate evolution.

Report

(4 results)
  • 2011 Annual Research Report   Final Research Report ( PDF )
  • 2010 Annual Research Report
  • 2009 Annual Research Report
  • Research Products

    (94 results)

All 2013 2012 2011 2010 2009 Other

All Journal Article (13 results) (of which Peer Reviewed: 13 results) Presentation (71 results) Book (2 results) Remarks (8 results)

  • [Journal Article] Evolution of a tissue-specific silencer underlies divergence in the expression of pax2 and pax8 paralogues2012

    • Author(s)
      Ochi, H., Tamai, T., Nagano, H., Kawaguchi, A., Sudou, N. and Ogino, H
    • Journal Title

      Nature Communications

      Volume: 3 Pages: 848-848

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Comparative expression analysis of the H3K27 demethylases, JMJD3 and UTX, with the H3K27 methylase, EZH2, in Xenopus2012

    • Author(s)
      Kawaguchi, A., Ochi, H., Sudou, N. and Ogino, H
    • Journal Title

      Int. J. Dev. Biol

      Volume: 56 Pages: 295-300

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Dynamic in vivo binding of transcription factors to cis-regulatory modules of cer and gsc in the stepwise formation of the Spemann-Mangold organizer2012

    • Author(s)
      Sudou, N., Yamamoto, S., Ogino, H. and Taira, M
    • Journal Title

      Development

      Volume: 139 Pages: 1651-1661

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Transcription factors involved in lens development from the preplacodal ectoderm2012

    • Author(s)
      Ogino, H., Ochi, H., Reza, H. M. and Yasuda, K
    • Journal Title

      Dev. Biol

      Volume: 363 Pages: 333-347

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Evolution of a tissue-specific silencer underlies divergence in the expression of pax2 and pax8 paralogues.2012

    • Author(s)
      Ochi, Haruki
    • Journal Title

      Nature Communications

      Volume: 3 Issue: 1 Pages: 848-848

    • DOI

      10.1038/ncomms1851

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Comparative expression analysis of the H3K27 demethylases, JMJD3 and UTX, with the H3K27 methylase, EZH2, in Xenopus.2012

    • Author(s)
      Kawaguchi, Akane
    • Journal Title

      International Journal of Developmental Biology

      Volume: 56 Issue: 4 Pages: 295-300

    • DOI

      10.1387/ijdb.113360ak

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Dynamic in vivo binding of transcription factors to cis-regulatory modules of cer and gsc in the stepwise formation of the Spemann-Mangold organizer.2012

    • Author(s)
      Sudou, Norihiro
    • Journal Title

      Development

      Volume: 139 Issue: 9 Pages: 1651-1661

    • DOI

      10.1242/dev.068395

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Transcription factors involved in lens development from the preplacodal ectoderm.2012

    • Author(s)
      Ogino, Hajime
    • Journal Title

      Developm ental Biology

      Volume: 363 Issue: 2 Pages: 333-347

    • DOI

      10.1016/j.ydbio.2012.01.006

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] onserved expression of mouse Six1 in the pre-placodal region (PPR) and identification of an enhancer for the rostral PPR2010

    • Author(s)
      Sato, S., Ikeda, K., Shioi, G., Ochi, H., Ogino, H., Yajima, H., Kawakami, K
    • Journal Title

      C. Dev. Biol

      Volume: 344 Pages: 158-171

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] The genome of the western clawed frog Xenopus tropicalis2010

    • Author(s)
      Hellsten, U., Harland, R. M. (他43名)
    • Journal Title

      Science

      Volume: 328 Pages: 633-636

    • Related Report
      2011 Final Research Report 2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Evolutionary origin of the Otx2 enhancer for its expression in visceral endoderm2010

    • Author(s)
      Kurokawa, D., Ohmura, T., Ogino, H., Takeuchi, M., Inoue, A., Inoue, F., Suda, Y. and Aizawa, S
    • Journal Title

      Dev. Biol

      Volume: 342 Pages: 110-120

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Conserved expression of mouse Six1 in the pre-placodal region (PPR) and identification of an enhancer for the rostral PPR2010

    • Author(s)
      Sato, Shigeru
    • Journal Title

      Developmental Biology

      Volume: 344 Pages: 158-171

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Evolutionary origin of the Otx2 enhancer for its expression in visceral endoderm2010

    • Author(s)
      Kurokawa, Daisuke
    • Journal Title

      Developmental Biology

      Volume: 342 Pages: 110-120

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Presentation] 組織特異的なサイレンサーの獲得によるパラログの発現パターンの多様化2013

    • Author(s)
      荻野肇
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡市
    • Year and Date
      2013-12-11
    • Related Report
      2011 Final Research Report
  • [Presentation] 組織特異的なサイレンサーの獲得によるパラログの発現パターンの多様化2012

    • Author(s)
      荻野肇
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡県福岡市
    • Year and Date
      2012-12-11
    • Related Report
      2011 Annual Research Report
  • [Presentation] Paralogous enhancers: a crossover point between developmental robustness and stress response2012

    • Author(s)
      Ochi, H
    • Organizer
      The 14th International Xenopus Conference
    • Place of Presentation
      Giens Peninsula, France
    • Year and Date
      2012-09-11
    • Related Report
      2011 Final Research Report
  • [Presentation] Paralogous enhancers : a crossover point between developmental robustness and stress response.2012

    • Author(s)
      Ochi, Haruki
    • Organizer
      The 14th International Xenopus Conference
    • Place of Presentation
      Giens Peninsula, France
    • Year and Date
      2012-09-11
    • Related Report
      2011 Annual Research Report
  • [Presentation] Evolution of a tissue-specific silencer underlies divergence in the expression of paralogues2012

    • Author(s)
      Ogino, H
    • Organizer
      The 14th International Xenopus Conference
    • Place of Presentation
      Giens Peninsula, France
    • Year and Date
      2012-09-10
    • Related Report
      2011 Final Research Report
  • [Presentation] Evolution of a tissue-specific silencer underlies divergence in the expression of paralogues.2012

    • Author(s)
      Ogino, Hajime
    • Organizer
      The 14th International Xenopus Conference
    • Place of Presentation
      Giens Peninsula, France
    • Year and Date
      2012-09-10
    • Related Report
      2011 Annual Research Report
  • [Presentation] ゲノム倍化が引き起こす遺伝子発現調節機構の進化2012

    • Author(s)
      荻野肇
    • Organizer
      第24回高遠・分子細胞生物学シンポジウム
    • Place of Presentation
      長野県伊那市
    • Year and Date
      2012-08-23
    • Related Report
      2011 Final Research Report
  • [Presentation] 体幹部一次感覚神経の発生と進化の鍵因子2012

    • Author(s)
      矢嶋浩
    • Organizer
      第24回高遠・分子細胞生物学シンポジウム
    • Place of Presentation
      長野県伊那市
    • Year and Date
      2012-08-23
    • Related Report
      2011 Final Research Report
  • [Presentation] パラログ形成にともなうシス調節機構の進化2012

    • Author(s)
      越智陽城
    • Organizer
      日本進化学会 14回大会
    • Place of Presentation
      東京都八王子市
    • Year and Date
      2012-08-23
    • Related Report
      2011 Final Research Report
  • [Presentation] ゲノム倍化が引き起こす遺伝子発現調節機構の進化2012

    • Author(s)
      荻野肇
    • Organizer
      第24回 高遠・分子細胞生物学シンポジウム
    • Place of Presentation
      長野県伊那市(招待講演)
    • Year and Date
      2012-08-23
    • Related Report
      2011 Annual Research Report
  • [Presentation] 体幹部一次感覚神経の発生と進化の鍵因子2012

    • Author(s)
      矢嶋浩
    • Organizer
      第24回 高遠・分子細胞生物学シンポジウム
    • Place of Presentation
      長野県伊那市
    • Year and Date
      2012-08-23
    • Related Report
      2011 Annual Research Report
  • [Presentation] パラログ形成にともなうシス調節機構の進化2012

    • Author(s)
      越智陽城
    • Organizer
      日本進化学会第14回東京大会
    • Place of Presentation
      東京都八王子市(招待講演)
    • Year and Date
      2012-08-23
    • Related Report
      2011 Annual Research Report
  • [Presentation] Evolution of a tissue-specific silencer underlies divergence in the expression of paralogues2012

    • Author(s)
      Ogino, H
    • Organizer
      第45回日本発生生物学会・第64回日本細胞生物学会合同大会
    • Place of Presentation
      兵庫県神戸市
    • Year and Date
      2012-05-31
    • Related Report
      2011 Final Research Report
  • [Presentation] The H3K27 demethylase, JMJD3, is essential for Xenopus eye development2012

    • Author(s)
      Kawaguchi, A
    • Organizer
      第45回日本発生生物学会・第64回日本細胞生物学会合同大会
    • Place of Presentation
      兵庫県神戸市
    • Year and Date
      2012-05-31
    • Related Report
      2011 Final Research Report
  • [Presentation] Evolution of a tissue-specific silencer underlies divergence in the expression of paralogues.2012

    • Author(s)
      Ogino, Hajime
    • Organizer
      第45回日本発生生物学会・第64回日本細胞生物学会合同大会
    • Place of Presentation
      兵庫県神戸市
    • Year and Date
      2012-05-31
    • Related Report
      2011 Annual Research Report
  • [Presentation] The H3K27 demethylase, JMJD3, is essential for Xenopus eye development.2012

    • Author(s)
      Kawaguchi, Akane
    • Organizer
      第45回日本発生生物学会・第64回日本細胞生物学会合同大会
    • Place of Presentation
      兵庫県神戸市
    • Year and Date
      2012-05-31
    • Related Report
      2011 Annual Research Report
  • [Presentation] Paralogous enhancers: a crossover point between developmental robustness and stress response2012

    • Author(s)
      Ochi, H
    • Organizer
      第45回日本発生生物学会・第64回日本細胞生物学会合同大会
    • Place of Presentation
      兵庫県神戸市
    • Year and Date
      2012-05-29
    • Related Report
      2011 Final Research Report
  • [Presentation] Paralogous enhancers : a crossover point between developmental robustness and stress response.2012

    • Author(s)
      Ochi, Haruki
    • Organizer
      第45回日本発生生物学会・第64回日本細胞生物学会合同大会
    • Place of Presentation
      兵庫県神戸市
    • Year and Date
      2012-05-29
    • Related Report
      2011 Annual Research Report
  • [Presentation] Conservation and diversification of cis-regulatory mechanisms of the pax2/5/8 paralog group in chordates2011

    • Author(s)
      Ochi, H
    • Organizer
      American Society for Cell Biology Annual Meeting
    • Place of Presentation
      Denver, Colorado, USA
    • Year and Date
      2011-12-04
    • Related Report
      2011 Final Research Report
  • [Presentation] Conservation and diversification of cis-regulatory mechanisms of the pax2/5/8 paralog group in chordates.2011

    • Author(s)
      Ochi, Haruki
    • Organizer
      The American Society for Cell Biology Annual Meeting
    • Place of Presentation
      Denver, Colorado, USA
    • Year and Date
      2011-12-04
    • Related Report
      2011 Annual Research Report
  • [Presentation] ツメガエルの初期発生におけるヒストン H3メチル化因子と脱メチル化因子の機能解析2011

    • Author(s)
      川口茜
    • Organizer
      第5回日本ツメガエル研究集会
    • Place of Presentation
      静岡県熱海市
    • Year and Date
      2011-10-06
    • Related Report
      2011 Final Research Report
  • [Presentation] 組織特異的サイレンサーの獲得によるパラログ遺伝子の発現の多様化2011

    • Author(s)
      越智陽城
    • Organizer
      第5回日本ツメガエル研究集会
    • Place of Presentation
      静岡県熱海市
    • Year and Date
      2011-10-06
    • Related Report
      2011 Final Research Report
  • [Presentation] ツメガエルの初期発生におけるヒストンH3メチル化因子と脱メチル化因子の機能解析2011

    • Author(s)
      川口茜
    • Organizer
      第5回 日本ツメガエル研究集会
    • Place of Presentation
      静岡県熱海市
    • Year and Date
      2011-10-06
    • Related Report
      2011 Annual Research Report
  • [Presentation] 組織特異的サイレンサーの獲得によるパラログ遺伝子の発現の多様化2011

    • Author(s)
      越智陽城
    • Organizer
      第5回 日本ツメガエル研究集会
    • Place of Presentation
      静岡県熱海市
    • Year and Date
      2011-10-06
    • Related Report
      2011 Annual Research Report
  • [Presentation] A pair of duplicated enhancers controls both a fail-safe regulation for development and adaptation to environmental stress2011

    • Author(s)
      Ochi, H
    • Organizer
      日本発生生物学会第44回大会
    • Place of Presentation
      沖縄県宜野湾市
    • Year and Date
      2011-05-20
    • Related Report
      2011 Final Research Report
  • [Presentation] A pair of duplicated enhancers controls both a fail-safe regulation for development and adaptation to environmental stress.2011

    • Author(s)
      Ochi, Haruki
    • Organizer
      日本発生生物学会第44回大会
    • Place of Presentation
      沖縄県宜野湾市
    • Year and Date
      2011-05-20
    • Related Report
      2011 Annual Research Report
  • [Presentation] Heterochronic shift of Six1 expression drives evolutionary transition of vertebrate primary sensory neurons2011

    • Author(s)
      Yajima, H
    • Organizer
      日本発生生物学会第44回大会
    • Place of Presentation
      沖縄県宜野湾市
    • Year and Date
      2011-05-18
    • Related Report
      2011 Final Research Report
  • [Presentation] A H3K27 demethylase, Jmjd3, is essential for Xenopus eye development2011

    • Author(s)
      Kawaguchi, A
    • Organizer
      日本発生生物学会第44回大会
    • Place of Presentation
      沖縄県宜野湾市
    • Year and Date
      2011-05-18
    • Related Report
      2011 Final Research Report
  • [Presentation] Heterochronic shift of Six1 expression drives evolutionary transition of vertebrate primary sensory neurons.2011

    • Author(s)
      Yajima, Hiroshi
    • Organizer
      日本発生生物学会第44回大会
    • Place of Presentation
      沖縄県宜野湾市
    • Year and Date
      2011-05-18
    • Related Report
      2011 Annual Research Report
  • [Presentation] A H3K27 demethylase, Jmjd3, is essential for Xenopus eye development.2011

    • Author(s)
      Kawaguchi, Akane
    • Organizer
      日本発生生物学会第44回大会
    • Place of Presentation
      沖縄県宜野湾市
    • Year and Date
      2011-05-18
    • Related Report
      2011 Annual Research Report
  • [Presentation] Evolutionary divergence and conservation of cis-regulatory elements in paralog formation2010

    • Author(s)
      Ochi, H
    • Organizer
      第33回日本分子生物学会年会・第83回日本生化学会大会合同大会
    • Place of Presentation
      兵庫県神戸市
    • Year and Date
      2010-12-09
    • Related Report
      2011 Final Research Report
  • [Presentation] Conservation and neofunctionalization of cis-regulatory elements in paralog evolution2010

    • Author(s)
      Ogino, H
    • Organizer
      第33回日本分子生物学会年会・第 83回日本生化学会大会合同大会
    • Place of Presentation
      兵庫県神戸市
    • Year and Date
      2010-12-09
    • Related Report
      2011 Final Research Report
  • [Presentation] Conservation and neofunctionalization of cis-regulatory elements in paralog evolution2010

    • Author(s)
      荻野肇
    • Organizer
      第33回日本分子生物学会年会・第83回日本生化学会大会合同大会
    • Place of Presentation
      神戸ポートアイランド(兵庫県神戸市)
    • Year and Date
      2010-12-09
    • Related Report
      2010 Annual Research Report
  • [Presentation] Evolutionary divergence and conservation of cis-regulatory elements in paralog formation2010

    • Author(s)
      越智陽城
    • Organizer
      第33回日本分子生物学会年会・第83回日本生化学会大会合同大会
    • Place of Presentation
      神戸ポートアイランド(兵庫県神戸市)
    • Year and Date
      2010-12-09
    • Related Report
      2010 Annual Research Report
  • [Presentation] Functional analysis of the histone H3K27 methyltransferase and demethylase in Xenopus embryonic development2010

    • Author(s)
      Kawaguchi, A
    • Organizer
      The 16th International Conference of the International Society of Differentiation
    • Place of Presentation
      奈良市
    • Year and Date
      2010-11-16
    • Related Report
      2011 Final Research Report
  • [Presentation] Functional analysis of the histone H3K27 methyltransferase and demethylase in Xenopus embryonic development2010

    • Author(s)
      川口茜
    • Organizer
      The 16th International Conference of the International Society of Differentiation
    • Place of Presentation
      奈良県新公会堂(奈良市)
    • Year and Date
      2010-11-16
    • Related Report
      2010 Annual Research Report
  • [Presentation] Evolution of a fail-safe regulatory system for kidney development2010

    • Author(s)
      Ochi, H
    • Organizer
      The 16th International Conference of the International Society of Differentiation
    • Place of Presentation
      奈良市
    • Year and Date
      2010-11-15
    • Related Report
      2011 Final Research Report
  • [Presentation] Evolution of a fail-safe regulatory system for kidney development2010

    • Author(s)
      越智陽城
    • Organizer
      The 16th International Conference of the International Society of Differentiation
    • Place of Presentation
      奈良県新公会堂(奈良市)
    • Year and Date
      2010-11-15
    • Related Report
      2010 Annual Research Report
  • [Presentation] Evolution of a fail-safe regulatory system after genome duplications in chordates2010

    • Author(s)
      Ogino, H
    • Organizer
      NAIST Grobal COE International Symposium 2010 "Plasticity in Development and Evolution"
    • Place of Presentation
      奈良県生駒市
    • Year and Date
      2010-11-11
    • Related Report
      2011 Final Research Report
  • [Presentation] Evolution of a fail-safe regulatory system after genome duplications in chordates2010

    • Author(s)
      荻野肇
    • Organizer
      NAIST Global COE International Symposium 2010
    • Place of Presentation
      奈良先端科学技術大学院大学(奈良県生駒市)
    • Year and Date
      2010-11-11
    • Related Report
      2010 Annual Research Report
  • [Presentation] Mechanisms leading to determination of the embryonic eye2010

    • Author(s)
      Grainger, R. M
    • Organizer
      13th International Xenopus Conference
    • Place of Presentation
      Lake Louise, Canada
    • Year and Date
      2010-09-16
    • Related Report
      2011 Final Research Report
  • [Presentation] Mechanisms leading to determination of the embryonic eye2010

    • Author(s)
      Grainger, Robert, M.
    • Organizer
      13th International Xenopus Conference
    • Place of Presentation
      Chateau Lake Louise(カナダ、Lake Louise)
    • Year and Date
      2010-09-16
    • Related Report
      2010 Annual Research Report
  • [Presentation] 幼生期と成体期の Xenopusでみられる四肢再生における異なる開始機構2010

    • Author(s)
      横山 仁
    • Organizer
      動物学会東北支部大会
    • Place of Presentation
      福島市
    • Year and Date
      2010-08-07
    • Related Report
      2011 Final Research Report
  • [Presentation] 幼生期と成体期のXenopusでみられる四肢再生における異なる開始機構2010

    • Author(s)
      横山仁
    • Organizer
      平成22年度動物学会東北支部大会
    • Place of Presentation
      福島県立医科大学(福島市)
    • Year and Date
      2010-08-07
    • Related Report
      2010 Annual Research Report
  • [Presentation] パラログ形成にともなうシス調節機構の進化2010

    • Author(s)
      荻野 肇
    • Organizer
      第12回日本進化学会大会
    • Place of Presentation
      東京都
    • Year and Date
      2010-08-05
    • Related Report
      2011 Final Research Report
  • [Presentation] パラログ形成にともなうシス調節機構の進化2010

    • Author(s)
      荻野肇
    • Organizer
      第12回日本進化学会大会
    • Place of Presentation
      東京工業大学(東京都)
    • Year and Date
      2010-08-05
    • Related Report
      2010 Annual Research Report
  • [Presentation] Evolution of cis-regulatory mechanisms in paralog formation2010

    • Author(s)
      Ogino, H
    • Organizer
      第43回日本発生生物学会大会
    • Place of Presentation
      京都市
    • Year and Date
      2010-06-21
    • Related Report
      2011 Final Research Report
  • [Presentation] Developmental switch from Rohon-Beard cells to dorsal root ganglia in Xenopus2010

    • Author(s)
      Yajima, H
    • Organizer
      第43回日本発生生物学会大会
    • Place of Presentation
      京都市
    • Year and Date
      2010-06-21
    • Related Report
      2011 Final Research Report
  • [Presentation] A fail-safe regulatory system generated by genome duplications for kidney development2010

    • Author(s)
      Ochi, H.
    • Organizer
      第43回日本発生生物学会大会
    • Place of Presentation
      京都市
    • Year and Date
      2010-06-21
    • Related Report
      2011 Final Research Report
  • [Presentation] Evolution of cis-regulatory mechanisms in paralog formation2010

    • Author(s)
      荻野肇
    • Organizer
      日本発生生物学会第43回年会
    • Place of Presentation
      京都国際会議場(京都市)
    • Year and Date
      2010-06-21
    • Related Report
      2010 Annual Research Report
  • [Presentation] A fail-safe regulatory system generated by genome duplications for kidney development2010

    • Author(s)
      越智陽城
    • Organizer
      日本発生生物学会第43回年会
    • Place of Presentation
      京都国際会議場(京都市)
    • Year and Date
      2010-06-21
    • Related Report
      2010 Annual Research Report
  • [Presentation] Developmental switch from Rohon-Beard cells to dorsal root ganglia in Xenopus2010

    • Author(s)
      矢嶋浩
    • Organizer
      日本発生生物学会第43回年会
    • Place of Presentation
      京都国際会議場(京都市)
    • Year and Date
      2010-06-21
    • Related Report
      2010 Annual Research Report
  • [Presentation] Functional analysis of epigenetic regulators, Ezh2 and Jmjd3, in Xenopus embryonic development2010

    • Author(s)
      Kawaguchi, A
    • Organizer
      第43回日本発生生物学会大会
    • Place of Presentation
      京都市
    • Year and Date
      2010-06-20
    • Related Report
      2011 Final Research Report
  • [Presentation] Different mechanisms in inhibition of limb regeneration between larval and adult Xenopus2010

    • Author(s)
      Yokoyama, H
    • Organizer
      第43回日本発生生物学会大会
    • Place of Presentation
      京都市
    • Year and Date
      2010-06-20
    • Related Report
      2011 Final Research Report
  • [Presentation] Functional analysis of epigenetic regulators, Ezh2 and Jmjd3, in Xenopus embryonic development2010

    • Author(s)
      川口茜
    • Organizer
      日本発生生物学会第43回年会
    • Place of Presentation
      京都国際会議場(京都市)
    • Year and Date
      2010-06-20
    • Related Report
      2010 Annual Research Report
  • [Presentation] Different mechanisms in inhibition of limb regeneration between larval and adult Xenopus2010

    • Author(s)
      横山仁
    • Organizer
      日本発生生物学会第43回年会
    • Place of Presentation
      京都国際会議場(京都市)
    • Year and Date
      2010-06-20
    • Related Report
      2010 Annual Research Report
  • [Presentation] Six1 acts as a molecular switch of primary sensory systems from Rohon-beard cells to DRG neurons2010

    • Author(s)
      Kawakami, K
    • Organizer
      The 11th Asian and Oceanian Conference on Transcription
    • Place of Presentation
      沖縄県今帰仁村
    • Year and Date
      2010-06-04
    • Related Report
      2011 Final Research Report
  • [Presentation] Six1 acts as a molecular switch of primary sensory systems from Rohon-beard cells to DRG neurons2010

    • Author(s)
      川上潔
    • Organizer
      11th Asian and Oceanian Conference on transcription
    • Place of Presentation
      ホテル ベルパライソ(沖縄県今帰仁村)
    • Year and Date
      2010-06-04
    • Related Report
      2010 Annual Research Report
  • [Presentation] A basis for an in vivo directed reprogramming of differentiated cells using neural crest cells as a model2009

    • Author(s)
      Takase, Y
    • Organizer
      第32回日本分子生物学会年会
    • Place of Presentation
      神奈川県横浜市
    • Year and Date
      2009-12-11
    • Related Report
      2011 Final Research Report
  • [Presentation] Expression and functional analysis of epigenetic regulators, Eed, Ezh2, Jmjd3 and Utx, in Xenopus embryonic development2009

    • Author(s)
      Okano, M
    • Organizer
      第32回日本分子生物学会年会
    • Place of Presentation
      神奈川県横浜市
    • Year and Date
      2009-12-11
    • Related Report
      2011 Final Research Report
  • [Presentation] Expression and functional analysis of epigenetic regulators, Eed, Ezh2, Jmjd3 and Utx, in Xenopus embryonic development2009

    • Author(s)
      岡野誠
    • Organizer
      第32回日本分子生物学会年会
    • Place of Presentation
      横浜市
    • Year and Date
      2009-12-11
    • Related Report
      2009 Annual Research Report
  • [Presentation] A basis for an in vivo directed reprogramming of differentiated cells using neural crest cells as a model2009

    • Author(s)
      高瀬悠太
    • Organizer
      第32回日本分子生物学会年会
    • Place of Presentation
      横浜市
    • Year and Date
      2009-12-11
    • Related Report
      2009 Annual Research Report
  • [Presentation] Pax2/5/8パラロググループのシス調節ネットワークの解析2009

    • Author(s)
      荻野 肇
    • Organizer
      第3回日本ツメガエル研究集会
    • Place of Presentation
      広島県廿日市市
    • Year and Date
      2009-10-06
    • Related Report
      2011 Final Research Report 2009 Annual Research Report
  • [Presentation] カエルの高効率トランスジェニックシステムを用いた機能ゲノム学的研究の展開2009

    • Author(s)
      荻野 肇
    • Organizer
      日本動物学会第80回大会
    • Place of Presentation
      静岡市
    • Year and Date
      2009-09-19
    • Related Report
      2011 Final Research Report 2009 Annual Research Report
  • [Presentation] Pax2/5/8パラログ遺伝子群のシス調節ネットワークの進化の研究2009

    • Author(s)
      越智陽城
    • Organizer
      日本動物学会第80回大会
    • Place of Presentation
      静岡市
    • Year and Date
      2009-09-17
    • Related Report
      2011 Final Research Report 2009 Annual Research Report
  • [Presentation] Transgenic analysis of a cis-regulatory network for the Pax2/5/8 paralog group in Xenopus: an evolutionary view2009

    • Author(s)
      Ochi, H
    • Organizer
      第42回日本発生生物学会大会
    • Place of Presentation
      新潟市
    • Year and Date
      2009-05-29
    • Related Report
      2011 Final Research Report
  • [Presentation] Cis-regulatory mechanisms controlling Six1 expression in the preplacodal region and sensory placodes2009

    • Author(s)
      Sato, S
    • Organizer
      第42回日本発生生物学会大会
    • Place of Presentation
      新潟市
    • Year and Date
      2009-05-29
    • Related Report
      2011 Final Research Report
  • [Presentation] Evolutionary origin of Otx2 enhancer for its expression in visceral endoderm2009

    • Author(s)
      Kurokawa, K
    • Organizer
      第42回日本発生生物学会大会
    • Place of Presentation
      新潟市
    • Year and Date
      2009-05-29
    • Related Report
      2011 Final Research Report
  • [Presentation] Transgenic analysis of a cis-regulatory network for the Pax2/5/8 paralog group in Xenopus : an evolutionary view2009

    • Author(s)
      越智陽城
    • Organizer
      日本発生生物学会第42回大会
    • Place of Presentation
      新潟市
    • Year and Date
      2009-05-29
    • Related Report
      2009 Annual Research Report
  • [Presentation] Evolutionary origin of Otx2 enhancer for its expression in visceral endoderm2009

    • Author(s)
      黒川大輔
    • Organizer
      日本発生生物学会第42回大会
    • Place of Presentation
      新潟市
    • Year and Date
      2009-05-29
    • Related Report
      2009 Annual Research Report
  • [Presentation] Cis-regulatory mechanisms controlling Sixl expression in the preplacodal region and sensory placodes2009

    • Author(s)
      佐藤滋
    • Organizer
      日本発生生物学会第42回大会
    • Place of Presentation
      新潟市
    • Year and Date
      2009-05-29
    • Related Report
      2009 Annual Research Report
  • [Book] Comparative genomics-based identification and analysis of cis-regulatory elements. Methods Mol. Biol. 917 (Xenopus Protocols, Second edition)2012

    • Author(s)
      Ogino, H., Ochi, H., Uchiyama, C., Louie, S. and Grainger, R. M
    • Publisher
      Humana press
    • Related Report
      2011 Final Research Report
  • [Book] Comparative genomics-based identification and analysis of cis-regulatory elements (in Methods in Molecular Biology; Vol. 917, Xenopus Protocols, 2nd edition : Post-Genomic Approaches)2012

    • Author(s)
      Ogino, Hajime
    • Publisher
      Humana Press
    • Related Report
      2011 Annual Research Report
  • [Remarks]

    • Related Report
      2011 Final Research Report
  • [Remarks] 報道関連情報雑誌論文(1)(Nature Communications誌に発表したゲノム倍化と遺伝子進化の研究)の意義を伝えた記事 2012年 5月 23日毎日新聞 朝刊 2012年 5月 23日産経新聞 朝刊 2012年 5月 23日奈良新聞 朝刊 2012年 5月 25日日経産業新聞 朝刊 2012年 6月 2日日刊工業新聞 朝刊 2012年 5月 25日 MSN産経 wes

    • Related Report
      2011 Final Research Report
  • [Remarks]

    • URL

      http://bsw3.naist.jp/courses/courses702.html

    • Related Report
      2011 Annual Research Report
  • [Remarks] 平成24年度末まで研究成果を公開。平成25年度より、異動先機関(長浜バイオ大学)にて新たに成果公開用のwebページを作成予定。

    • URL

      http://bsw3.naist.jp/courses/courses702.html

    • Related Report
      2011 Annual Research Report
  • [Remarks]

    • URL

      http://bsgcoe.naist.jp/special-grp03.html

    • Related Report
      2010 Annual Research Report
  • [Remarks]

    • URL

      http://bsgcoe.naist.jp/ogino/index.html

    • Related Report
      2010 Annual Research Report
  • [Remarks]

    • URL

      http://bsgcoe.naist.jp/special-grp03.html

    • Related Report
      2009 Annual Research Report
  • [Remarks]

    • URL

      http://bsgcoe.naist.jp/ogino/index.html

    • Related Report
      2009 Annual Research Report

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Published: 2009-04-01   Modified: 2018-03-28  

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