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Function of the photo-induced triplet radical pair in the photo-sensor BLUF protein

Research Project

Project/Area Number 21370069
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Biophysics
Research InstitutionNagoya University

Principal Investigator

MINO Hiroyuki  名古屋大学, 理学研究科, 准教授 (70300902)

Co-Investigator(Kenkyū-buntansha) ONO Takaaki  茨城大学, 工学部, 教授 (10175268)
MASUDA Shinji  東京工業大学, バイオ研究基盤支援総合センター, 准教授 (30373369)
Project Period (FY) 2009 – 2011
Project Status Completed (Fiscal Year 2011)
Budget Amount *help
¥19,240,000 (Direct Cost: ¥14,800,000、Indirect Cost: ¥4,440,000)
Fiscal Year 2011: ¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2010: ¥6,110,000 (Direct Cost: ¥4,700,000、Indirect Cost: ¥1,410,000)
Fiscal Year 2009: ¥9,360,000 (Direct Cost: ¥7,200,000、Indirect Cost: ¥2,160,000)
Keywords光生物 / BLUF / 磁場効果 / EPR / ESR / フラビン / センサータンパク質 / ラジカル対 / 時間分解EPR / 時間分EPR / BLUP
Research Abstract

A photo-induced radical pair of FADH・and Y8・in BLUF protein SyPixD was studied by electron paramagnetic resonance(EPR) spectroscopy. The EPR signal has been characterized by a Pake doublet signal with complete S=1 spin state. The temperature dependence of the spin-lattice relaxation of the radical pair of flavin and tyrosine in SyPixD was investigated by pulsed electron paramagnetic resonance(EPR) spectroscopy. Based on the temperature dependence of spin. lattice relaxation time T-1, the exchange coupling of the radical pair was estimated as 2J=6 to 8 cm^<-1>, defined as-2JS-1* S-2.
The radical pair was utilized as a probe to analyze the oligomer of SyPixD. The relative arrangement of PixD proteins in the complex was investigated by pulsed electron-electron double resonance(PELDOR) with the orientation selection. Based on the decameric structure in the crystal, the possible structure for the PELDOR results was evaluated.
The transient EPR measurements have been performed to investigate the reaction pathway to produce radical-pair. The results show that the radical-pair was produced in the range of 200-263 K. The possible reaction mechanism was proposed.

Report

(4 results)
  • 2011 Annual Research Report   Final Research Report ( PDF )
  • 2010 Annual Research Report
  • 2009 Annual Research Report
  • Research Products

    (21 results)

All 2011 2010 2009 Other

All Journal Article (3 results) (of which Peer Reviewed: 3 results) Presentation (17 results) Remarks (1 results)

  • [Journal Article] Pulsed EPR analysis of the photo-induced triplet radical pair in the BLUF protein SyPixD : Determination of the protein-protein distance and orientation in the oligomeric protein2011

    • Author(s)
      Toru Kondo, Shinji Masuda and Hiroyuki Mino
    • Journal Title

      Applied Magnetic Resonance

      Volume: 40 Issue: 4 Pages: 545-555

    • DOI

      10.1007/s00723-011-0237-1

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Temperature dependence of relaxation time of a stable radical pair in SyPixD investigated by pulsed EPR2011

    • Author(s)
      Toru Kondo, Shinji Masuda, Kazuhiko Tsutsui and Hiroyuki Mino
    • Journal Title

      Chemical Physics Letter

      Volume: 501 Issue: 4-6 Pages: 528-533

    • DOI

      10.1016/j.cplett.2010.11.073

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Temperature dependence of relaxation time of a stable radical pair in SyPixD investigated by pulsed EPR2011

    • Author(s)
      Toru Kondo, Shinji Masuda, Kazuhiko Tsutsui, Hiroyuki Mino
    • Journal Title

      Chemical physics Letter

      Volume: 501 Pages: 528-533

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Presentation] Nonselective excitation of pulsed ELDOR using multi-frequency microwaves2011

    • Author(s)
      Asada, Y. Mutoh, R. Ishiura, M. and Mino H
    • Organizer
      Rocky Mountain Conference
    • Place of Presentation
      Rocky Mountain Conference
    • Related Report
      2011 Annual Research Report 2011 Final Research Report
  • [Presentation] 複数周波数マイクロ波発生装置を用いた電子電子二重共鳴法における非選択励起2011

    • Author(s)
      浅田侑希、武藤梨沙、石浦正寛、三野広幸
    • Organizer
      電子スピンサイエンス学会
    • Place of Presentation
      仙台国際センター
    • Related Report
      2011 Annual Research Report 2011 Final Research Report
  • [Presentation] The position of the Mn^<2+> binding site at the first dark state for photoactivation in Photosystem II manganese cluster2011

    • Author(s)
      Mizue Asada, Hiroyuki Mino
    • Organizer
      日本生物物理学会
    • Place of Presentation
      兵庫県立大学
    • Related Report
      2011 Annual Research Report
  • [Presentation] 青色光受容タンパク質SyPixDで生成するラジカル対由来doublet信号のESEEM解析2010

    • Author(s)
      近藤徹、増田真二、三野広幸
    • Organizer
      Asia-Pacific EPR/ESR Symposium
    • Place of Presentation
      済州島コンベンションセンター
    • Related Report
      2011 Final Research Report 2010 Annual Research Report
  • [Presentation] The formation of an radical pair FADH.-Y8. in SyPixD investigated by pulsed and transient EPR2010

    • Author(s)
      三野広幸、近藤徹、筒井和彦、増田真二
    • Place of Presentation
      東北大学
    • Related Report
      2011 Final Research Report
  • [Presentation] ESEEM studies of the doublet signal with spin S=1 in the blue light sensor BLUF protein SyPixD2010

    • Author(s)
      近藤徹、増田真二、三野広幸
    • Organizer
      日本生物物理学会年会
    • Place of Presentation
      東北大学
    • Related Report
      2011 Final Research Report 2010 Annual Research Report
  • [Presentation] The formation of an radical pair FADH・-Y8・in SyPixD investigated by pulsed and transient EPR2010

    • Author(s)
      三野広幸、近藤徹、筒井和彦、増田真二
    • Place of Presentation
      東北大学
    • Related Report
      2010 Annual Research Report
  • [Presentation] 時間分解ESR法による青色センサータンパク質SyPixDの光反応過程の解析2009

    • Author(s)
      筒井和彦、近藤徹、増田真二、三野広幸
    • Organizer
      第3回分子科学討論会
    • Place of Presentation
      名古屋大学
    • Related Report
      2011 Final Research Report
  • [Presentation] 法による青色光センサータンパク質SyPixD重合体のタンパク間相互作用の解析2009

    • Author(s)
      近藤徹、筒井和彦、増田真二、三野広幸
    • Organizer
      第3回分子科学討論会
    • Place of Presentation
      名古屋大学
    • Related Report
      2011 Final Research Report
  • [Presentation] PELDOR analysis of the protein-protein interaction in the blue light sensor BLUF protein SyPixD2009

    • Author(s)
      近藤徹、筒井和彦、増田真二、三野広幸
    • Organizer
      日本生物物理学会年会
    • Place of Presentation
      徳島
    • Related Report
      2011 Final Research Report
  • [Presentation] Time resolved EPR study of light reaction processes in blue light sensing protein SyPixD2009

    • Author(s)
      筒井和彦,近藤徹,増田真二,三野広幸
    • Organizer
      日本生物物理学会年会
    • Place of Presentation
      徳島
    • Related Report
      2011 Final Research Report
  • [Presentation] PELDOR法による青色光センサータンパク質SyPixD重合体のタンパク間相互作用の解析2009

    • Author(s)
      近藤徹、筒井和彦、増田真二、三野広幸
    • Organizer
      第48回電子スピンサイエンス学会年会
    • Place of Presentation
      神戸大学
    • Related Report
      2011 Final Research Report
  • [Presentation] 時間分解ESR法による青色センサータンパク質SyPixDの光反応過程の解析2009

    • Author(s)
      筒井和彦,近藤徹,増田真二,三野広幸
    • Organizer
      第48回電子スピンサイエンス学会年会
    • Place of Presentation
      神戸大学
    • Related Report
      2011 Final Research Report
  • [Presentation] 時間分解ESR法による青色センサータンパク質SyPixDの光反応過程の解析2009

    • Author(s)
      筒井和彦, 近藤徹, 増田真二, 三野広幸
    • Organizer
      電子スピンサイエンス学会
    • Place of Presentation
      神戸大学
    • Related Report
      2009 Annual Research Report
  • [Presentation] PELDOR法による青色光センサータンパク質SyPixD重合体のタンパク間相互作用の解析2009

    • Author(s)
      近藤徹・筒井和彦・増田真二・三野広幸
    • Organizer
      電子スピンサイエンス学会
    • Place of Presentation
      神戸大学
    • Related Report
      2009 Annual Research Report
  • [Presentation] PELDOR analysis of the protein-protein interaction in the blue light sensor B LUF protein SyPixD2009

    • Author(s)
      近藤徹・筒井和彦・増田真二・三野広幸
    • Organizer
      日本生物物理学会
    • Place of Presentation
      徳島文理大学
    • Related Report
      2009 Annual Research Report
  • [Presentation] Time resolved EPR study of light reaction processes in blue light sensing protein SyPixD2009

    • Author(s)
      筒井和彦, 近藤徹, 増田真二, 三野広幸
    • Organizer
      日本生物物理学会
    • Place of Presentation
      徳島文理大学
    • Related Report
      2009 Annual Research Report
  • [Remarks]

    • URL

      http://www.glab.phys.nagoya-u.ac.jp

    • Related Report
      2011 Final Research Report

URL: 

Published: 2009-04-01   Modified: 2016-04-21  

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