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Mechanism of U1 snRNP-independent splicing

Research Project

Project/Area Number 21510204
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 基礎ゲノム科学
Research InstitutionKobe University

Principal Investigator

INOUE Kunio  神戸大学, 大学院・理学研究科, 教授 (40252415)

Project Period (FY) 2009 – 2011
Project Status Completed (Fiscal Year 2011)
Budget Amount *help
¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2011: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2010: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2009: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Keywordsゲノム発現 / スプライシング / イントロン / スプライス部位 / U1 snRNP / 熱ストレス / エキソン
Research Abstract

Many eukaryotic genes are interrupted by introns that are removed from primary transcripts by RNA splicing. U1 snRNP plays a crucial role in the 5' splice site recognition during splicing. Recently, we found the first example of naturally-occurring U1-independent U2-type splicing in humans. Our present study showed that a tissue-specific splicing regulator, Fox-1, failed to induce hF1γexon 9 skipping if the 5' splice site of intron 9 was mutated to the U1-dependent type, suggesting that U1-independent splicing contributes to the regulation of alternative splicing of a class of pre-mRNAs.

Report

(4 results)
  • 2011 Annual Research Report   Final Research Report ( PDF )
  • 2010 Annual Research Report
  • 2009 Annual Research Report
  • Research Products

    (14 results)

All 2011 2009 Other

All Journal Article (4 results) (of which Peer Reviewed: 2 results) Presentation (4 results) Book (1 results) Remarks (5 results)

  • [Journal Article] Role and mechanism of U1-independent pre-mRNA splicing in the regulation of alternative splicing2009

    • Author(s)
      Fukumura, K., and Inoue, K
    • Journal Title

      RNA Biol

      Volume: 6 Pages: 395-398

    • Related Report
      2011 Final Research Report
  • [Journal Article] U1-independent pre-mRNA splicing contributes to the regulation of alternative splicing2009

    • Author(s)
      Fukumura, K., Taniguchi, I., Sakamoto, H., Ohno, M., and Inoue, K
    • Journal Title

      Nucleic Acids Res

      Volume: 37 Pages: 1907-1914

    • Related Report
      2011 Final Research Report
  • [Journal Article] U1-independent pre-mRNA splicing contributes to the regulation of alternative splicing.2009

    • Author(s)
      Fukumura, K., et al.
    • Journal Title

      Nucleic Acids Res. 37

      Pages: 1907-1914

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Role and mechanism of U1-independent pre-mRNA splicing in the regulation of alternative splicing.2009

    • Author(s)
      Fukumura, K., Inoue, K.
    • Journal Title

      RNA Biology 6

      Pages: 395-398

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Presentation] 選択的スプライシング制御とその破綻2011

    • Author(s)
      井上邦夫
    • Organizer
      第31回内分泌疾患談話会
    • Place of Presentation
      群馬ロイヤルホテル
    • Year and Date
      2011-11-02
    • Related Report
      2011 Annual Research Report
  • [Presentation] 熱ストレスに応答した選択的スプライシング制御機構の解析2011

    • Author(s)
      河村有砂、山田智子、福村和宏、鈴木仁、Vu, Luyen Thi、塚原俊文、坂本博、井上邦夫
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜
    • Related Report
      2011 Annual Research Report 2011 Final Research Report
  • [Presentation] U1-independent splicing and the splicing regulation2009

    • Author(s)
      Inoue, K.
    • Organizer
      第32回 日本分子生物学会
    • Place of Presentation
      パシフィコ横浜(神奈川県)
    • Year and Date
      2009-12-09
    • Related Report
      2009 Annual Research Report
  • [Presentation] U1-independent splicing and the splicing regulation2009

    • Author(s)
      Inoue, K
    • Organizer
      第32回日本分子生物学会・ワークショップ「多様性を生むRNAプログラム」
    • Place of Presentation
      パシフィコ横浜
    • Related Report
      2011 Final Research Report
  • [Book] 蛋白質核酸酵素・増刊号エキソン認識と選択的mRNAスプライシング制御の分子メカニズム2009

    • Author(s)
      福村和宏、井上邦夫
    • Publisher
      共立出版
    • Related Report
      2011 Final Research Report
  • [Remarks]

    • URL

      http://www.research.kobe-u.ac.jp/fsci-rna/

    • Related Report
      2011 Final Research Report
  • [Remarks]

    • URL

      http://www.edu.kobe-u.ac.jp/fsci-biol/staff/kunio.html

    • Related Report
      2011 Final Research Report
  • [Remarks]

    • URL

      http://www.research.kobe-u.ac.jp/fsci-rna/

    • Related Report
      2011 Annual Research Report
  • [Remarks]

    • URL

      http://www.research.kobe-u.ac.jp/fsci-rna/

    • Related Report
      2010 Annual Research Report
  • [Remarks]

    • URL

      http://www.research.kobe-u.ac.jp/fsci-rna/

    • Related Report
      2009 Annual Research Report

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Published: 2009-04-01   Modified: 2016-04-21  

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