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Theoretical studies of electronic structure, chemical reaction and function of multi-nuclear transition-metal complexes in biological systems

Research Project

Project/Area Number 21550014
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Physical chemistry
Research Institution公益財団法人豊田理化学研究所 (2011)
Toyota Physical & Chemical Research Institute (2009-2010)

Principal Investigator

YAMAGUCHI Kizashi  公益財団法人豊田理化学研究所, フェロー (80029537)

Co-Investigator(Renkei-kenkyūsha) KAMIYA Nobuo  大阪市立大学, 理学研究科, 教授 (60152865)
SHEN Kenjin  岡山大学, 自然科学研究科, 教授 (60261161)
NAKAMURA Haruki  大阪大学, 蛋白質研究所, 教授 (80134485)
OKUMURA Mitsutaka  大阪大学, 理学研究科, 教授 (40356712)
YAMANAKA Syusuke  大阪大学, 理学研究科, 助教 (10324865)
KAWAKAMI Takashi  大阪大学, 理学研究科, 助教 (30321748)
KITAGAWA Yasutaka  大阪大学, 理学研究科, 助教 (60362612)
Project Period (FY) 2009 – 2011
Project Status Completed (Fiscal Year 2011)
Budget Amount *help
¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2011: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2010: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2009: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Keywords生体内多核遷移金属錯体 / 電子構造 / 化学反応性 / 機能発現 / 理論的研究 / p. 450 / MMO, OEC, PSII / p-450 / CaMn_4O_5クラスター / OEC / 光合成PSII / 水分解反応 / メタンモノオキシゲネース / 酸素添加反応 / 遷移状態計算 / 光合成活性中心 / 反応機構 / CaMn405クラスター / MRCC / UB3LYP / p450 / ラジカル機構
Research Abstract

We have developed theoretical methods for elucidation of electronic and spin structures of multi-nuclear transition-metal complexes in biological systems such as CaM4O5 cluster in the oxygen-evolving complex(OEC) of photosystem II(PSII). The electronic and spin structures elucidated by theoretical calculations have been applied for investigation and prediction of chemical reactivity such as water oxidation mechanism at OEC of PSII and biological functions such as electron transfer.

Report

(4 results)
  • 2011 Annual Research Report   Final Research Report ( PDF )
  • 2010 Annual Research Report
  • 2009 Annual Research Report
  • Research Products

    (77 results)

All 2011 2010 2009 Other

All Journal Article (61 results) (of which Peer Reviewed: 60 results) Presentation (10 results) Book (4 results) Remarks (2 results)

  • [Journal Article] Broken-symmetry Natural Orbital(BANO)-Mk-MRCC Study on the Exchange Coupling in the Bunuclear Copper(II) Compounds2011

    • Author(s)
      T. Saito, N. Yasuda, S. Nishihara, S. Yamanaka, Y. Kitagawa, T. Kawakami, M. Okumura, K. Yamaguchi
    • Journal Title

      Chem. Phys. Lett

      Volume: 505 Pages: 11-15

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Unique Structural and Electronic Features of Perferryl-Oxo Oxidant in Cytochrome p-4502011

    • Author(s)
      H. Isobe, S. Yamanaka, M. Okumura, K. Yamaguchi, J. Shimada
    • Journal Title

      J. Phys. Chem

      Volume: A115 Issue: 36 Pages: 10730-10738

    • DOI

      10.1021/jp206004y

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Labile electronic and spin states of the CaMn4O5 cluster in the PSII system refined to the 1.9A X-ray resolution UB3LYP computational results2011

    • Author(s)
      K. Kanda, S. Yamanaka, T. Saito, Y. Umena, K. Kawakami, J. R. Shen, N. Kamiya, M. Okumura, H. Nakamura, K. Yamaguchi
    • Journal Title

      Chem. Phys. Lett

      Volume: 506 Issue: 1-3 Pages: 98-103

    • DOI

      10.1016/j.cplett.2011.02.030

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Possible Mechanisms for the O-O Bond Formation in Oxygen Evolution Reaction at the CaMn4O5(H2O) 4 Cluster of PSII refined to 1.9A X-ray Resolution2011

    • Author(s)
      S. Yamanaka, H. Isobe, K. Kanda, T. Saito, Y. Umena, K. Kawakami, J. R. Shen, N. Kamiya, M. Okumura, H. Nakamura, K. Yamaguchi
    • Journal Title

      Chem. Phys. Lett

      Volume: 511 Issue: 1-3 Pages: 138-145

    • DOI

      10.1016/j.cplett.2011.06.021

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Symmetry and Broken Symmetry in Molecular Orbital Description of Unstable Molecules IV. Comparison between Single- and Multi-reference Computational Results for Antiaromtic Molecules2011

    • Author(s)
      Toru Saito
    • Journal Title

      Theoretical Chemistry Accounts

      Volume: 130 Issue: 4-6 Pages: 749-763

    • DOI

      10.1007/s00214-011-0941-9

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Singlet-Triplet Energy Gap for Trimethylenemethane, Oxyallyl Diradical and Related Species : Single and Multi-reference Computational Results2011

    • Author(s)
      Toru Saito
    • Journal Title

      Theoretical Chemistry Accounts

      Volume: 130 Issue: 4-6 Pages: 739-748

    • DOI

      10.1007/s00214-011-0914-z

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Potential Energy Curve for Ring-Opening Reactions : Comparison Between Broken-Symmetry and Multireference Coupled Cluster Methods2011

    • Author(s)
      Toru Saito
    • Journal Title

      Journal of Physical Chemistry A

      Volume: 115 Issue: 22 Pages: 5625-5631

    • DOI

      10.1021/jp201463h

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Broken-symmetry Natural Orbital (BSNO)-Mk-MRCC Study on the Exchange Coupling in the Binuclear Copper (II) Compounds2011

    • Author(s)
      T.Saito, M.Okumura, K.Yamaguchi, et al
    • Journal Title

      Chem.Phys.Lett.

      Volume: 505 Issue: 1-3 Pages: 11-15

    • DOI

      10.1016/j.cplett.2011.02.018

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Modification of MOF Catalysts by Manipulation of Counter-ions : Experimental and Theoretical Studies of Photochemical Hydrogen Production from Water over Microporous Diruthenium (II, III) Coordination Polymers2011

    • Author(s)
      片岡祐介
    • Journal Title

      Supramolecular Chemistry

      Volume: 23 Issue: 3-4 Pages: 287-296

    • DOI

      10.1080/10610278.2010.527976

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Theoretical Studies on the Structural and Magnetic Property of Arginase Active Site2011

    • Author(s)
      Y.Kitagawa, M.Okumura, K.Yamaguchi, et al
    • Journal Title

      Suplamol.Chem.

      Volume: 23 Issue: 1-2 Pages: 22-29

    • DOI

      10.1080/10610278.2010.506552

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Theoretical Studies on the Electronic Structure of the Synthetic Complex of Soluble Methanemonooxygenase Intermediate Q2011

    • Author(s)
      T.Saito, M.Okumura, K.Yamaguchi, et al
    • Journal Title

      Suplamol.Chem.

      Volume: 23 Issue: 1-2 Pages: 83-87

    • DOI

      10.1080/10610278.2010.510560

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Ab initio Study of Magnetic Interactions of Manganese-Oxide Clusters2011

    • Author(s)
      K.Kanda, T.Saito, K.Yamaguchi, et al
    • Journal Title

      Polyhedron

      Volume: 30 Issue: 18 Pages: 3256-3261

    • DOI

      10.1016/j.poly.2011.04.042

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Theoretical Study on Singlet Oxygen Adsorption onto Surface of Graphene-like Aromatic Hydrocarbon Molecules2011

    • Author(s)
      K.Kinoshita, T.Kawakami, K.Yamaguchi, et al
    • Journal Title

      Polyhedron

      Volume: 30 Issue: 18 Pages: 3249-3255

    • DOI

      10.1016/j.poly.2011.04.036

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Theoretical Studies of Host-Guest Interaction in the Cavity of the Nanoporous [Rh2bza4pyz] n crystal2011

    • Author(s)
      T.Kawakami, M.Okumura, K.Yamaguchi, et al
    • Journal Title

      Polyhedron

      Volume: 30 Issue: 18 Pages: 3292-3297

    • DOI

      10.1016/j.poly.2011.07.021

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] MRCC, APUCC and APUBD Calculations of Didehydropolyene Diradicals, The Nature of Through-Bond Effective Exchange Integrals for Diradicals2010

    • Author(s)
      S, Nishihara, T. Saito, S. Yamanaka, Y. Kitagawa, T. Kawakami, M. Okumura, K. Yamaguchi
    • Journal Title

      Mol. Phys

      Volume: 19 Pages: 2559-2578

    • DOI

      10.1155/2010/908132

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Reinvestigation of the Reaction of Ethylene and Singlet Oxygen by the Approximate Spin Projection Method. Comparison with Multi-reference Coupled-Cluster Calculations2010

    • Author(s)
      T. Saito, S. Nishihara, Y. Kataoka, Y. Nakanishi, Y. Kitagawa, T. Kawakami, S. Yamanaka, M. Okumura, K. Yamaguchi
    • Journal Title

      J. Phys. Chem

      Volume: A114 Issue: 30 Pages: 7969-7874

    • DOI

      10.1021/jp102772v

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Which Hybrid GGA DFT is Suitable for Cu2O2 Systems if the Spin Contamination Error Is Removed2010

    • Author(s)
      T. Saito, Y. Kataoka, Y. Nakanishi, T. Matsui, Y. Kitagawa, T. Kawakami, M. Okumura, K. Yamaguchi
    • Journal Title

      Chem. Phys

      Volume: 368 Issue: 1-2 Pages: 1-6

    • DOI

      10.1016/j.chemphys.2009.12.014

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Theory of Chemical Bonds in Metalloenzymes. XV. Local Singlet and Triplet Diradical Mechanisms for Radical Coupling Reactions in the Oxygen Evolution Complex2010

    • Author(s)
      K. Yamaguchi, M. Shoji, T. Saito, H. Isobe, S. Nishihara, K. Koizumi, S. Yamada, T. Kawakami, Y. Kitagawa, S. Yamanaka, M. Okumura
    • Journal Title

      Int. J. Quant. Chem

      Volume: 110 Pages: 3101-3128

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Instability in Chemical Bonds : UNO CASCC, Resonating UCC and Approximately Projected UCC Methods to Quasidegenerated Electronic Systems2010

    • Author(s)
      S.Yamanaka, S.Nishihara, K.Nakata, K.Yamaguchi, et al
    • Journal Title

      Recent Progress of Coupled-Cluster Theory (J.Paldus, et al. Eds, Elsevier, Heidelberg)

      Volume: 1 Pages: 621-648

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] UNO- and ULO-MRCC (Mk), AP-UCC and AP-UBD Approaches to Diradical Systems2010

    • Author(s)
      S.Nishihara, S.Yamanaka, , K.Yamaguchi, et al
    • Journal Title

      Int.J.Quant.Chem.

      Volume: 110 Pages: 3015-3026

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] MRCC, APUCC and APUBD calculations of didehydronated species : comparisonamong calculated through-bond effective exchange integrals for diradicals2010

    • Author(s)
      T.Saito, S.Nishihara, S.Yamanaka, K.Yamaguchi, et al
    • Journal Title

      Mol.Phys.

      Volume: 19 Pages: 2533-2541

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] MkMRCC, APUCC and APUBD approaches to l, n-didehydropolyene diradicals : the nature of through-bond exchange interactions2010

    • Author(s)
      T.Saito, S.Nishihara, S.Yamanaka, K.Yamaguchi, et al
    • Journal Title

      Mol.Phys.

      Volume: 19 Pages: 2559-2578

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A broken-symmetry study on the antomerization of cyclobutadiene.Comparison with UNO- and DNO-MRCC methods2010

    • Author(s)
      T.Saito, S.Nishihara, K.Yamaguchi, et al
    • Journal Title

      Chem.Phys.Lett.

      Volume: 498 Pages: 253-258

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Multireference Character of 1,3-Dipolar Cycloaddition of Ozone with Ethylene and Acrylonitrile2010

    • Author(s)
      T.Saito, S.Nishihara, Y.Kataoka, K.Yamaguchi, et al
    • Journal Title

      J.Phys.Chem.

      Volume: A114 Pages: 12116-12123

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Development of Approximately Spin Projected Energy Derivatives for Biradical Systems2010

    • Author(s)
      Y.Kitagawa, T.Saito, Y.Nakanishi, Y.Kataoka, K.Yamaguchi, et al
    • Journal Title

      Int.J.Quant.Chem.

      Volume: 110 Pages: 3053-3060

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Which hybrid GGA DFT is suitable for Cu202 systems if the spin contamination error is removed?2010

    • Author(s)
      T.Saito, Y.Kataoka, Y.Nakanishi, M.Okumura, K.Yamaguchi, et al
    • Journal Title

      Chem.Phys.

      Volume: 368 Pages: 1-6

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Theoretical studies of the effect of orientation of ligands and spin contamination error on the chemical bonding in the Fe02 core in oxymyoglobin2010

    • Author(s)
      Y.Kitagawa, T.Saito, Y.Nakanishi, Y.Kataoka, K.Yamaguchi, et al
    • Journal Title

      J.Mol.Struct.Theochem

      Volume: 954 Pages: 98-104

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Theoretical study on the electronic configurations and nature of chemical bonds of dirodium tetraacete complexes [Rh2(CH3COO)4(L)2(L=H2O, Free) : Broken symmetry approach2010

    • Author(s)
      Y.Kitagawa, T.Saito, Y.Nakanishi, Y.Kataoka, K.Yamaguchi, et al
    • Journal Title

      Bull.Chem.Soc.Jpn.

      Volume: 83 Pages: 1481-1488

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Theory of Chemical Bonds in Metalloenzymes.XIV.Correspondence between Magnetic Coupling Mode and Radical Coupling Mechanism in Hydroxylations with Methane Monooxygenase and Related Species2010

    • Author(s)
      T.Saito, M.Shoji, H.Isobe, S.Yamanaka, K.Yamaguchi, et al
    • Journal Title

      Int.J.Quant.Chem.

      Volume: 110 Pages: 2955-2981

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Theory of Chemical Bonds in Metalloenzymes.XV.Local Singlet and Triplet Diradical Mechanisms for Radical Coupling Reactions in the Oxygen Evolution Complex2010

    • Author(s)
      K.Yamaguchi, M.Shoji, amanaka, M.Okumura Y.Kitagawa, T.Saito, Y.Nakanishi, Y.Kataoka, et al
    • Journal Title

      Int.J.Quant.Chem.

      Volume: 110 Pages: 3101-3128

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Sequence-dependent proton-transfer reaction in stacked GC pair III : the influence of proton transfer to conductivity2010

    • Author(s)
      Y.Nakanishi, T.Matsui, Y.Shigeta, K.Yamaguchi, et al
    • Journal Title

      Int.J.Quant.Chem.

      Volume: 110 Pages: 3053-3060

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Broken-Symmetry法の発展-マンガン酸化物クラスターの水分解酸素発生機構2010

    • Author(s)
      Y.Nakanishi, T.Matsui, Y.Shigeta, K.Yamaguchi, et al
    • Journal Title

      化学同人:化学のブレークスルー(理論化学編)

      Volume: 1 Pages: 89-96

    • Related Report
      2010 Annual Research Report
  • [Journal Article] Resonating Coupled-Cluster CI Approach to Ion-Radical Systems : Comparison with the unrestricted Coupled-Cluster Approach2009

    • Author(s)
      S. Yamanaka, S. Nishihara, K. Nakata, Y. Yonezawa, M. Okumura, T. Takada, H. Nakamura, K. Yamaguchi
    • Journal Title

      Int. J. Quant. Chem

      Volume: 109 Issue: 15 Pages: 3811-3818

    • DOI

      10.1002/qua.22441

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Resonating Broken-Symmetry Configuration Interaction Approach for Double Exchange Magnetic Systems2009

    • Author(s)
      S. Nishihara, S. Yamanaka, K. Kusakabe, K. Nakata, Y. Yonezawa, H. Nakamura, K. Yamaguchi
    • Journal Title

      J. Phys. Condens. Matter

      Volume: 21 Issue: 6 Pages: 64227-64227

    • DOI

      10.1088/0953-8984/21/6/064227

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Symmetry and Broken Symmetry in Molecular Orbital Descriptions of Unstable Molecules 3.The Nature of Chemical Bonds of Spin Frustrated Systems2009

    • Author(s)
      T. Kawakami, R. Takeda, S. Nishihara, S. Yamanaka, T. Saito, M. Shoji, S. Yamada, Y. Kitagawa, M. Okumura, K. Yamaguchi
    • Journal Title

      J. Phys. Chem

      Volume: A113 Issue: 52 Pages: 15281-15297

    • DOI

      10.1021/jp905991r

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Transition State Optimization Based on Approximate Spin-projected(AP) method2009

    • Author(s)
      T. Saito, S. Nishihara, Y. Kataoka, Y. Nakanishi, T. Matsui, Y. Kitagawa, T. Kawakami, M. Okumura, K. Yamaguchi
    • Journal Title

      Chem. Phys. Lett

      Volume: 483 Pages: 168-171

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] A resonating broken-symmetry CI study of cationic states of phenalenyl dimeric compounds2009

    • Author(s)
      S.Nishihara, K.Yamaguchi, et al.
    • Journal Title

      Polyhedron 28

      Pages: 1628-1633

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Theoretical studies on electronic structures and magnetic interactions of K_4[Pt_2(pop)_4X]・2H_2O(X=Cl, Br)complexes2009

    • Author(s)
      Y.Kitagawa, K.Yamaguchi, et al.
    • Journal Title

      Polyhedron 28

      Pages: 1668-1671

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Theoretical studies on magnetic interactions between Cu(II)ions in hydroxypyridone nucleobases2009

    • Author(s)
      Y.Nakanishi, K.Yamaguchi, et al.
    • Journal Title

      Polyhedron 28

      Pages: 1714-1717

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Theoretical study of magnetic interaction between C_<60> anion radicals2009

    • Author(s)
      Y.Kitagawa, K.Yamaguchi, et al.
    • Journal Title

      Polyhedron 28

      Pages: 1750-1753

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Theoretical calculations of the pressure effect for the β-phase of p-NPNN2009

    • Author(s)
      M.Okumura, K.Yamaguchi, et al.
    • Journal Title

      Polyhedron 28

      Pages: 1898-1902

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Theoretical studies on magnetic interactions between Cu(II)ions in salen nucleobases2009

    • Author(s)
      Y.Nakanishi, K.Yamaguchi, et al.
    • Journal Title

      Polyhedron 28

      Pages: 1945-1949

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Theoretical calculations of effective exchange integrals by spin projected and unprojected broken-symmetry methods II : Cluster models of Jahn-Teller distorted K_2CuF_4 solid2009

    • Author(s)
      T, Onishi, K.Yamaguchi
    • Journal Title

      Polyhedron 28

      Pages: 1972-1976

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Theoretical calculations of magnetic properties of the α-, β, γ and δ-phases of p-NPNN2009

    • Author(s)
      M.Okumura, K.Yamaguchi, et al.
    • Journal Title

      Polyhedron 28

      Pages: 1768-1775

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Theory of chemical bonds in metalloenzymes XII : Electronic and spin structures of metallo-oxo and isoelectronic species and spin crossover phenomena in oxygenation reactions2009

    • Author(s)
      K.Yamaguchi, et al.
    • Journal Title

      Polyhedron 28

      Pages: 2044-2052

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Quantum dynamic simulations for single molecular magnets using anisotropic spin models2009

    • Author(s)
      T.Kawakami, K.Yamaguchi, et al
    • Journal Title

      Polyhedron 28

      Pages: 2092-2096

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Estimation of effective exchange integral value of polyradical systems based on the band calculation2009

    • Author(s)
      Y.Nakanishi, K.Yamaguchi, et al
    • Journal Title

      Int.J.Quant.Chem. 109

      Pages: 3632-3640

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Approximately spin-projected Hessian for broken symmetry method and stretching frequencies of F_2 and singlet O_22009

    • Author(s)
      Y.Kitagawa, K.Yamaguchi, et al.
    • Journal Title

      Int.J.Quant.Chem. 109

      Pages: 3641-3648

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Theoretical studies on chemical bonding between Cu(II)and oxygen molecule in type 3 copper proteins2009

    • Author(s)
      T.Saito, K.Yamaguchi, et al.
    • Journal Title

      Int.J.Quant.Chem. 109

      Pages: 3649-3658

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Theory of chemical bonds in metalloenzymes XIII : singlet and triplet diradical mechanisms of hydroxylations with ion-oxo species and P450 are revisted2009

    • Author(s)
      K.Yamaguchi, et al.
    • Journal Title

      Int.J.Quant.Chem. 109

      Pages: 3723-3744

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Extended Hartree-Fock theory of chemical reactions.IX.Diradical and perepoxide mechanisms for oxygenations of ethyelene with molecular oxygen and iron-oxo species are revisted.2009

    • Author(s)
      K.Yamaguchi, et al.
    • Journal Title

      Int.J.Quant.Chem. 109

      Pages: 3745-3766

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Resonating coupled-cluster CI approach to ion-radical systems : Comparison with unrestricted coupled-cluster approach2009

    • Author(s)
      S.Yamanaka, K.Yamaguchi, et al.
    • Journal Title

      Int.J.Quant.Chem. 109

      Pages: 3811-3818

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] BS DFT and BS HDFT studies of Cr-Cr sextuple bond from the view point of electron correlation effects2009

    • Author(s)
      Y.Kitagawa, K.Yamaguchi, et al.
    • Journal Title

      Int.J.Quant.Chem. 109

      Pages: 3315-3324

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Hybrid-DFT study on electronic structures of the active site of sweet potato puple acid phosphatase : The oigin of stronger antiferrmagnetic couplings than other purple acid phosphatases2009

    • Author(s)
      K.Koizumi, K.Yamaguchi, et al.
    • Journal Title

      J.Phys.Chem. A113

      Pages: 5099-5104

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Spin contamination error in optimized geometry of singlet carbene(^1A_1) by broken-symmetry method2009

    • Author(s)
      Y.Kitagawa, K.Yamaguchi, et al.
    • Journal Title

      J.Phys.Chem. A113

      Pages: 15041-15046

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Theoretical investigation of thermal decomposition of peroxidized coelenterazines with and without external perturbations2009

    • Author(s)
      H.Isobe, K.Yamaguchi, et al.
    • Journal Title

      J.Phys.Chem. A113

      Pages: 15171-15187

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Symmetry and broken-symmetry in molecular orbital descriptions of unstable molecules 3.The nature of chemical bonds of spin frustrated systems2009

    • Author(s)
      T.Kawakami, K.Yamaguchi, et al.
    • Journal Title

      J.Phys.Chem. A113

      Pages: 15281-15297

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Electroconductive porous coordination polymer Cu[Cu(pdt)_2]composed of donoar and acceptor building units2009

    • Author(s)
      S.Takaishi, K.Yamaguchi, et al.
    • Journal Title

      Inorg.Chem. 48

      Pages: 9048-9050

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A resonating broken symmetry configuration interaction approach for double exchange magnetic systems2009

    • Author(s)
      S.Nishihara, K.Yamaguchi, et al.
    • Journal Title

      J.Phys.Condens.Matter 21

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Transition state optimization based on approximate spin-projected(AP)method2009

    • Author(s)
      T.Saito, K.Yamaguchi, et al.
    • Journal Title

      Chem.Phys.Lett. 483

      Pages: 168-171

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Instability in Chemical Bonds from Broken-Symmetry Single-Reference to Symmetry-Adapted Multireference Approaches to Strongly Correlated Electron Systems2009

    • Author(s)
      K.Yamaguchi, et al.
    • Journal Title

      CP1108, (Americal Institute Phys(AIP)) 1

      Pages: 20-29

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Presentation] Development of Broken Symmetry Methods. Application to the CaMn4O5 Cluster st OEC of PSII Refined to 1.9A X-Ray Resolution2011

    • Author(s)
      K.Yamaguchi
    • Organizer
      The Seventh Congress of the International Society for Theoretical Chemical Physics (ISTCP-VII)
    • Place of Presentation
      Tokyo、Japan
    • Year and Date
      2011-09-18
    • Related Report
      2011 Annual Research Report
  • [Presentation] Electronic and Spin Sates of the CaMn4O5 Cluster at OEC of PSII Refined to 1.9A X-Ray Resolution2011

    • Author(s)
      K.Yamaguchi
    • Organizer
      International Symposium on Activation of Dioxygen and Homogeneous Catalytic Oxidation
    • Place of Presentation
      Okinawa、Japan
    • Year and Date
      2011-07-20
    • Related Report
      2011 Annual Research Report
  • [Presentation] Electronic and Spin Sates of the CaMn4O5 Cluster at OEC of PSII Refined to 1.9A X-Ray Resolution2011

    • Author(s)
      K. Yamaguchi
    • Organizer
      International Symposium on Activation of Dioxygen and Homogeneous Catalytic Oxidation
    • Place of Presentation
      Okinawa
    • Related Report
      2011 Final Research Report
  • [Presentation] Development of Broken-Symmetry Methods. Application to the CaMn4O5 Cluster st OEC of PSII Refined to 1.9A X-Ray Resolution2011

    • Author(s)
      K. Yamaguchi
    • Organizer
      The Seventh Congress of the International Society for Theoretical Chemical Physics
    • Place of Presentation
      Waseda
    • Related Report
      2011 Final Research Report
  • [Presentation] First Principle Calculations of Effective Exchange Integrals-Comparison between SR(BS)and MRCC Computational Results2010

    • Author(s)
      K.Yamaguchi
    • Organizer
      ICCMSE(International Conference of Computational Methods in Science and Engineering)VIII
    • Place of Presentation
      Kos(Greece)(招待講演)
    • Year and Date
      2010-10-02
    • Related Report
      2010 Annual Research Report
  • [Presentation] First Principle Calculations of Effective Exchange Integrals-Comparison between SR(BS) and MRCC Computational Results2010

    • Author(s)
      K. Yamaguchi
    • Organizer
      ICCMSE VIII
    • Place of Presentation
      Greece
    • Related Report
      2011 Final Research Report
  • [Presentation] 金属酵素における化学結合理論―チトクロムp450鉄オキソ酸化活性種の反応性とスピン状態―2009

    • Author(s)
      山口兆
    • Organizer
      同志社大学ナノサイエンス研究会
    • Place of Presentation
      同志社大学
    • Year and Date
      2009-10-30
    • Related Report
      2009 Annual Research Report
  • [Presentation] Theory of Chemical Bonds in Metalloenzymes-Manganese Oxides Clusters in the Oxygen Evolution Center-2009

    • Author(s)
      山口兆
    • Organizer
      ICCMSE(International conference of computational methods in science and engineering)VII
    • Place of Presentation
      Rhodes(Greece)
    • Year and Date
      2009-09-30
    • Related Report
      2009 Annual Research Report
  • [Presentation] 化学反応における軌道対称性の破れの理論-酸化反応を中心として-2009

    • Author(s)
      山口兆
    • Organizer
      日本化学会北海道支部夏期講習会
    • Place of Presentation
      室蘭高専
    • Year and Date
      2009-07-10
    • Related Report
      2009 Annual Research Report
  • [Presentation] Theory of Molecular Magnetism2009

    • Author(s)
      山口兆
    • Organizer
      Pre-conference of International Congress of Quantum Chemistry(ICQC XIII)
    • Place of Presentation
      Oslo(Norway)
    • Year and Date
      2009-06-23
    • Related Report
      2009 Annual Research Report
  • [Book] Broken-Symmetry法の発展2011

    • Author(s)
      山口兆
    • Publisher
      化学同人編集部
    • Related Report
      2011 Final Research Report
  • [Book] 計算化学における多階層連結コンピューティング(エネルギー科学における多階層連結コンピューティング)2011

    • Author(s)
      山口兆、山中秀介
    • Publisher
      国際高等研究所
    • Related Report
      2011 Final Research Report
  • [Book] 計算化学における多階層連結コンピューティング(三間編、エネルギー科学における多階層連結コンピューティング)2011

    • Author(s)
      山口兆、山中秀介
    • Publisher
      国際高等研、奈良、日本
    • Related Report
      2011 Annual Research Report
  • [Book] Broke-Symmetry法の発展.マンガン酸化物クラスターの水分解酸素発生機構(理論化学編)2010

    • Author(s)
      山口兆
    • Publisher
      化学同人
    • Related Report
      2011 Final Research Report
  • [Remarks]

    • URL

      http://www.toyotariken.jp/researcher/j_yamaguchi.html

    • Related Report
      2011 Final Research Report
  • [Remarks]

    • URL

      http://www.toyotariken.jp/index.htm

    • Related Report
      2011 Annual Research Report

URL: 

Published: 2009-04-01   Modified: 2023-01-13  

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