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Investigation of a cytosolic sulfur transfer pathway for tRNA thio-modification and biosynthesis of sulfur-containing molecules

Research Project

Project/Area Number 21570150
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Functional biochemistry
Research InstitutionOsaka Medical College

Principal Investigator

NAKAI Yumi  大阪医科大学, 医学部, 講師 (80268193)

Project Period (FY) 2009 – 2011
Project Status Completed (Fiscal Year 2011)
Budget Amount *help
¥4,810,000 (Direct Cost: ¥3,700,000、Indirect Cost: ¥1,110,000)
Fiscal Year 2011: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2010: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2009: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
KeywordstRNA硫黄修飾 / 酵母 / ミトコンドリア / サイトゾル / 鉄硫黄クラスター / システインデスルフラーゼ / tRNA修飾 / ロダネーゼ / ユビキチン様タンパク質 / 硫黄付加 / 含硫小分子 / チオカルボキシル基 / 硫黄運搬
Research Abstract

We found that ubiquitin-like protein Urm1 and ubiquitin-activating enzyme-like protein Uba4 were strictly required for the s2 modification. The carboxyl-terminal glycine residue of Urm1 was critical for the s2 modification, indicating direct involvement of the unique ubiquitin-related system in this process. We also demonstrated that the s2 and mcm5 modifications in cytosolic tRNAs influence each other's efficiency. Taken together, our data indicate that the s2 modification of cytosolic tRNAs is a more complex process that requires additional unidentified components.

Report

(4 results)
  • 2011 Annual Research Report   Final Research Report ( PDF )
  • 2010 Annual Research Report
  • 2009 Annual Research Report
  • Research Products

    (14 results)

All 2011 2010 2009 Other

All Journal Article (2 results) (of which Peer Reviewed: 1 results) Presentation (10 results) Book (1 results) Remarks (1 results)

  • [Journal Article] Arabidopsis cytosolic Nbp35 homodimer can assemble both [2Fe-2S] and [4Fe-4S] clusters in two distinct domains2009

    • Author(s)
      Kohbushi H, Nakai Y, Kikuchi S, Yabe T, Hori H, Nakai M.
    • Journal Title

      Biochem Biophys Res Commun

      Volume: 378(4) Pages: 810-5

    • Related Report
      2011 Final Research Report
  • [Journal Article] Arabidopsis cytosolic Nbp35 homodimer can assemble both[2Fe-2S]and[4Fe-4S]clusters in two distinct domains2009

    • Author(s)
      Kohbushi, H., et.al.
    • Journal Title

      Biochemical and Biophysical Research Communications 378

      Pages: 810-815

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Presentation] tRNA修飾に関与するユビキチン様(UBL)タンパク質・ユビキチン活性化タンパク質様(UBA)タンパク質の機能相関と、その酵母オルソログとの関係の解析2011

    • Author(s)
      中井由実・原田明子・橋口康之・中井正人・林秀行
    • Organizer
      第84回日本生化学会大会
    • Place of Presentation
      京都国際会館(日本)
    • Year and Date
      2011-09-20
    • Related Report
      2011 Final Research Report
  • [Presentation] tRNA修飾に関与するユビキチン様(UBL)タンパク質・ユビキチン活性化タンパク質様(UBA)タンパク質の機能相関と、その酵母オルソログとの関係の解析2011

    • Author(s)
      中井由実, 他
    • Organizer
      第84回日本生化学会大会
    • Place of Presentation
      京都国際会館(日本)(選抜口頭発表)
    • Year and Date
      2011-09-20
    • Related Report
      2011 Annual Research Report
  • [Presentation] Proteins required for thio-modification of tRNAs participate in the biosyntheses of sulfur-containing cofactors2011

    • Author(s)
      Yumi Nakai・Akiko Harada・Yasuyuki Hashiguchi・Takeshi Murakawa・Masato Nakai・Hideyuki Hayashi
    • Organizer
      The Third International Conference on Cofactors 03
    • Place of Presentation
      Univ. of Turku(Finland)
    • Year and Date
      2011-07-12
    • Related Report
      2011 Final Research Report
  • [Presentation] Proteins required for thio-modification of tRNAs participate in the biosyntheses of sulfur-containing cofactors2011

    • Author(s)
      Yumi Nakai, etc.
    • Organizer
      The Third International Conference on Cofactors 03 (ICC-03)
    • Place of Presentation
      Univ.of Turku (Finland)(invited)
    • Year and Date
      2011-07-12
    • Related Report
      2011 Annual Research Report
  • [Presentation] Cytosolic thio-modification of the wobble uridine in cytosolic tRNAs requires a ubiquitin-like protein Urm1 and an E1-like protein Uba42011

    • Author(s)
      Yumi Nakai・Masato Nakai・Hideyuki Hayashi
    • Organizer
      The 16th Annual Meeting of the RNA & Society and The RNA Society of Japan 13th Annual Meeting 2011
    • Place of Presentation
      International Conference Center of Kyoto(Japan)
    • Year and Date
      2011-06-16
    • Related Report
      2011 Final Research Report
  • [Presentation] Cytosolic thio-modification of the wobble uridine in cytosolic tRNAs requires a ubiquitin-like protein Urm1 and an E1-like protein Uba42011

    • Author(s)
      Yumi Nakai, etc.
    • Organizer
      The 16th Annual Meeting of the RNA Society and The RNA Society of Japan 13th Annual Meeting 2011
    • Place of Presentation
      International ConferenceCenter of Kyoto (Japan)
    • Year and Date
      2011-06-16
    • Related Report
      2011 Annual Research Report
  • [Presentation] 酵母Urm1-Uba4は酵母サイトゾルtRNAの硫黄修飾に必要なタンパク質修飾系(UBL-UBA)である。2010

    • Author(s)
      中井由実・中井正人・林秀行
    • Organizer
      第32回日本分子生物学会年会・第83回日本生化学会大会合同
    • Place of Presentation
      神戸ポートアイランド
    • Year and Date
      2010-12-10
    • Related Report
      2011 Final Research Report
  • [Presentation] 酵母Urm1-Uba4は酵母サイトゾルtRNAの硫黄修飾に必要なタンパク質修飾系(UBL-UBA)である2010

    • Author(s)
      中井由実, 他
    • Organizer
      BMB2010(第32回日本分子生物学会年会・第83回 日本生化学会大会 合同)
    • Place of Presentation
      神戸ポートアイランド(日本)
    • Year and Date
      2010-12-10
    • Related Report
      2010 Annual Research Report
  • [Presentation] 酵母の鉄硫黄クラスター生合成とtRNA硫黄修飾の関連について2009

    • Author(s)
      中井由実.中井正人.林秀行
    • Organizer
      第82回日本生化学会大会
    • Place of Presentation
      神戸ポートアイランド(日本)
    • Year and Date
      2009-10-23
    • Related Report
      2011 Final Research Report
  • [Presentation] 酵母の鉄硫黄クラスター生合成とtRNA硫黄修飾の関連について2009

    • Author(s)
      中井由実, 他
    • Organizer
      第82回 日本生化学会大会
    • Place of Presentation
      神戸ポートアイランド(兵庫)
    • Year and Date
      2009-10-23
    • Related Report
      2009 Annual Research Report
  • [Book] 無敵のバイオテクニカルシリーズ2011

    • Author(s)
      中井正人、中井由実
    • Publisher
      羊土社
    • Related Report
      2011 Final Research Report
  • [Remarks]

    • URL

      http://www.osaka-med.ac.jp/deps/med/index.htm

    • Related Report
      2011 Final Research Report

URL: 

Published: 2009-04-01   Modified: 2016-04-21  

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