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Resonance Raman Study on the Proton Pumping Mechanism of Cytochrome c Oxidase

Research Project

Project/Area Number 21570171
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Biophysics
Research InstitutionUniversity of Hyogo

Principal Investigator

OGURA Takashi  兵庫県立大学, 大学院・生命理学研究科, 教授 (70183770)

Research Collaborator YANAGISAWA Sachiko  兵庫県立大学, 大学院・生命理学研究科, 助教 (60557982)
NAKASHIMA Satoru  兵庫県立大学, 大学院・生命理学研究科, 特任准教授 (80263234)
KUBO Minoru  兵庫県立大学, 大学院・生命理学研究科, 特任助教 (90392878)
Project Period (FY) 2009 – 2011
Project Status Completed (Fiscal Year 2011)
Budget Amount *help
¥4,550,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥1,050,000)
Fiscal Year 2011: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2010: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2009: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Keywords好気呼吸 / 生体エネルギー変換 / チトクロムC酸化酵素 / 酸素還元 / プロトンポンプ / 共鳴ラマン / 部位特異的アミノ酸置換 / 振動スペクトル / ヘム / 水素結合 / ミトコンドリア / 細胞呼吸 / チトクロムc酸化酵素 / 酸素活性化 / タンパク質構造ダイナミクス / 酸化的リン酸化 / 呼吸鎖電子伝達系 / 構造ダイナミクス / 鉄-ヒスチジン結合
Research Abstract

Cytochrome c oxidase plays an essentially important function in cell respiration to maintain life, and catalyzes dioxygen reduction to water, which is coupled with proton pumping across the membrane. In order to elucidate the mechanism of this enzyme, high resolution structures at a picometer level are to be determined by resonance Raman spectroscopy. In the present study, we have established assignments of some Raman siganals. In addition, an intermediate conformational state and cooperative dynamics of the two hemes have been detected, which are essential for an efficient proton pump.

Report

(4 results)
  • 2011 Annual Research Report   Final Research Report ( PDF )
  • 2010 Annual Research Report
  • 2009 Annual Research Report
  • Research Products

    (111 results)

All 2012 2011 2010 2009 Other

All Journal Article (26 results) (of which Peer Reviewed: 26 results) Presentation (80 results) Remarks (5 results)

  • [Journal Article] An intermediate conformational state during ligand binding to cytochrome c oxidase detected by time-resolved resonance Raman analyses of heme peripheral groups2012

    • Author(s)
      Izumi Ishigami, Takeshi Nishigaki, Kyoko Shinzawa-Itoh, Shinya Yoshikawa, Satoru Nakashima and Takashi Ogura
    • Journal Title

      Chem. Lett.

      Volume: 2 Issue: 2 Pages: 178-180

    • DOI

      10.1246/cl.2012.178

    • NAID

      130004426495

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] T-quaternary structure of oxy human adult hemoglobin in the presence of two allosteric effectors, L35 and IHP2011

    • Author(s)
      Kenji Kanaori, Yusuke Tajiri, Antonio Tsuneshige, Izumi Ishigami, Takashi Ogura, Kunihiko Tajima, Saburo Neya and Takashi Yonetani
    • Journal Title

      Biochim. Biophys. Acta-Bioenergetics

      Volume: 1807 Issue: 10 Pages: 1253-1261

    • DOI

      10.1016/j.bbabio.2011.06.004

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Post-Translational His-Cys Cross-Linkage Formation in Tyrosinase Induced by Copper(II)-Peroxo Species2011

    • Author(s)
      Nobutaka Fujieda, Takuya Ikeda, Michiaki Murata, Sachiko Yanagisawa, Shigetoshi Aono, Kei Ohkubo, Satoshi Nagao, Takashi Ogura, Shun Hirota, Shunichi Fukuzumi, Yukihiro Nakamura, Yoji Hata, Shinobu Itoh
    • Journal Title

      Journal of the American Chemical Society

      Volume: 133 Issue: 5 Pages: 1180-1183

    • DOI

      10.1021/ja108280w

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Resonance Raman study on the oxygenated and the ferryl-oxo species of indoleamine 2, 3-dioxygenase during catalytic turnover2011

    • Author(s)
      Sachiko Yanagisawa, Masaki Horitani, Hiroshi Sugimoto, Yoshitsugu Shiro, Norihiro Okada, and Takashi Ogura
    • Journal Title

      Faraday Disc

      Volume: 148 Pages: 239-247

    • DOI

      10.1039/c004552g

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Spectroscopic and computational characterization of Cu^<II>-OOR(R=H or cumyl) complexes bearing a Me_6-tren ligand2011

    • Author(s)
      Yu Jin Choi, et al.
    • Journal Title

      Dalton Trans.

      Volume: 40 Pages: 2234-2241

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Post-translational His-Cys Cross Linkage Formation in Tyrosinase Induced by Copper(II)-Peroxo Species2011

    • Author(s)
      Nobutaka Fujieda, et al.
    • Journal Title

      J.Am.Chew.Soc.

      Volume: 133 Pages: 1180-1183

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Resonance Raman study on the oxygenated and the ferryl-oxo species of indoleamine 2,3-dioxygenase during catalytic turnover2011

    • Author(s)
      Sachiko Yanagisawa, et al.
    • Journal Title

      Faraday Disc.

      Volume: 148 Pages: 239-247

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Important Roles of Tyr43 at the Putative Heme Distal Side in Oxygen Recognition and Stability of the Fe(II)-O_2 Complex of YddV, a Globin-coupled Heme-based Oxygen Sensor Diguanylate Cyclase2010

    • Author(s)
      Kenichi Kitanishi, et al.
    • Journal Title

      Biochemistry

      Volume: 49 Pages: 10381-10393

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A Specific Interaction of L-Tryptophan with CO of CO-Bound Indoleamine 2,3-Dioxygenase Identified by Resonance Raman Spectroscopy2010

    • Author(s)
      Sachiko Yanagisawa, et al.
    • Journal Title

      Biochemistry

      Volume: 49 Pages: 10081-10088

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Synthesis, Structural and Spectroscopic Characterization, and Reactivities of Mononuclear Cobalt(III)-Peroxo Complexes2010

    • Author(s)
      Jaeheung Cho, et al.
    • Journal Title

      J.Am.Chem.Soc.

      Volume: 132 Pages: 16977-16986

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A Low-Spin Ruthenium(IV)-Oxido Complex : Does the Spin State Have an Impact on the Reactivity?2010

    • Author(s)
      Takahiko Kojima, et al.
    • Journal Title

      Angew.Chem.Int.Ed.

      Volume: 49 Pages: 8449-8453

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Reversible O-O Bond Cleavage and Formation between Mn(IV)-Peroxo and Mn(V)-Oxo Corroles2010

    • Author(s)
      Sun Hee Kim, et al.
    • Journal Title

      J.Am.Chem.Soc.

      Volume: 132 Pages: 14030-14032

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Cell-free synthesis of cytochrome c oxidase, a multicomponent membrane protein2010

    • Author(s)
      Yukie Katayama, et al.
    • Journal Title

      J.Bioener.and Biomemb.

      Volume: 42 Pages: 235-240

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Nickel(II) Complexes of tpa Ligands with 6-Phenyl Substituents(Ph_ntpa).Structure and H_2O_2-Reactivity2010

    • Author(s)
      T.Tano, et al.
    • Journal Title

      Bull.Chem.Soc.Jpn.

      Volume: 83 Pages: 530-538

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A square-planar Ni(II) complex with an N_2S_2 donor set similar to the active centre of nickel-containing superoxide dismutase and its reaction with superoxide2010

    • Author(s)
      D.Nakane, et al.
    • Journal Title

      Chem.Commun.

      Volume: 46 Pages: 2142-2144

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Resonance Raman study on the oxygenated and the ferryl-oxo species of indoleamine 2, 3-dioxygenase during catalytic turnover2010

    • Author(s)
      Sachiko Yanagisawa, Masaki Horitani, Hiroshi Sugimoto, Yoshitsugu Shiro, Norihiro Okada, Takashi Ogura
    • Journal Title

      Faraday Discussions (印刷中)

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Cell-free synthesis of cytochrome c oxidase, a multicomponent membrane protein2010

    • Author(s)
      Yukie Katayama, Kunitoshi Shimokata, Makoto Suematsu, Takashi Ogura, Tomitake Tsukihara, Shinya Yoshikawa, Hideo Shimada
    • Journal Title

      J.Bioenergetics and Biomembranes

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A Resonance Raman Band Assignable to the O-O Stretching Mode in the Resting Oxidized State of Bovine Heart Cytochrome c Oxidase2010

    • Author(s)
      Miyuki Sakaguchi, Kyoko Shinzawa-Itoh, Shinya Yoshikawa, Takashi Ogura
    • Journal Title

      J.Bioenergetics and Biomembranes

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Nickel(II)complexes of TPA ligands with 6-phenyl substituents PhnTPA. Structure and H_2O_2-reactivity2010

    • Author(s)
      Tano, T., Doi, Y., Inosako, M., Kunishita, A., Kubo, M., Ishimaru, H., Ogura, T., Sugimoto, H., Itoh, S.
    • Journal Title

      Bull.Chem.Soc.Jpn. (印刷中)

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A square-planar Ni(II)complex with an N_2S_2 donor set similar to the active centre of nickel-containing superoxide dismutase and its reaction with superoxide2010

    • Author(s)
      Nakane, D., Kuwasako, S., Tsuge, M., Kubo, M., Funahashi, Y., Ozawa, T., Ogura, T., Masuda, H.
    • Journal Title

      Chem.Commun. 46

      Pages: 2142-2144

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Resonance Raman Study of a High-valent Fe=O Porphyrin Complex as a Model for Peroxide Compound II2010

    • Author(s)
      Hirohito Ishimaru, Hiroshi Fujii, Takashi Ogura
    • Journal Title

      Chem.Lett. 39

      Pages: 332-333

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Identification of the Fe-O_2 and the Fe=O Heme Species for Indoleamine 2, 3- Dioxygenase during Catalytic Turnover2010

    • Author(s)
      Yanagisawa, S., Yotsuya, K., Hashiwaki, Y., Horitani, M., Sugimoto, H., Shiro, Y., Appelman, E.H., Ogura
    • Journal Title

      Chem.Lett. 39

      Pages: 36-37

    • NAID

      10027176398

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Spectroscopic Characterization of a Hydroperoxo-Heme Intermediate : Conversion of a Side-On Peroxo to an End-On Hydroperoxo Complex2009

    • Author(s)
      Liu, J.G., Ohta, T., Yamaguchi, S., Ogura, T., Sakamoto, S., Maeda, Y., Naruta, Y.
    • Journal Title

      Angew.Chem.Int.Ed. 48

      Pages: 9262-9267

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Geometric and electronic structure and reactivity of a mononuclear 'side-on' nickel(III)-peroxo complex2009

    • Author(s)
      Cho, J., Sarangi, R., Annaraj, J., Kim, S.Y., Kubo, M., Ogura, T., Solomon, E.I, Nam, W.
    • Journal Title

      Nature Chemistry 1

      Pages: 568-572

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Oxidation Reactivity of a Bis(μ-oxo)Dinickel(III)Complexes : Arene Hydroxylation of the Supporting Ligand2009

    • Author(s)
      Honda, K., Cho, J., Matsumoto, T., Roh, J., Furutachi, H., Tosha, T., Kubo, M., Fujinami, S., Ogura, T., Kitagawa, T., Suzuki, M.
    • Journal Title

      Angewandte Chemie, Int.Ed. 121

      Pages: 3354-3357

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Mononuclear Copper(II)-Superoxo Complexes that Mimic the Structure and Reactivity of the Active Centers of PHM and DβM2009

    • Author(s)
      Kunishita, A., Kubo, M., Sugimoto, H., Ogura, T., Sato, K., Takui, T., Itoh, S.
    • Journal Title

      J.Am.Chem.Soc. 131

      Pages: 2788-2789

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Presentation] チトクロムc酸化酵素におけるヘムa側鎖ヒドロキシファルネシルエチル基の共鳴ラマン線の帰属2012

    • Author(s)
      坂口美幸, その他
    • Organizer
      日本化学会第92春季年会
    • Place of Presentation
      慶応大学、神奈川県
    • Year and Date
      2012-03-27
    • Related Report
      2011 Annual Research Report 2011 Final Research Report
  • [Presentation] フェムト秒レーザーを用いた高感度時間分解赤外分光装置の開発と蛋白質水溶液への応用2011

    • Author(s)
      久保稔, その他
    • Organizer
      日本分光学会年次講演会
    • Place of Presentation
      理化学研究所、神奈川県
    • Year and Date
      2011-12-02
    • Related Report
      2011 Annual Research Report 2011 Final Research Report
  • [Presentation] Protein Dy namics of and Reaction Mechanism of Cytochrome c Oxidaseas Studied with Resonance Raman Spectroscop y2011

    • Author(s)
      Izumi Ishigami, et al.
    • Organizer
      The 3rd Asian Spectroscopy Conference
    • Place of Presentation
      Xiamen University, China
    • Year and Date
      2011-11-30
    • Related Report
      2011 Final Research Report
  • [Presentation] Protein Dynamics of and Reaction Mechanism of Cytochrome c Oxidase as Studied with Resonance Raman Spectroscopy2011

    • Author(s)
      Izumi Ishigami, et al
    • Organizer
      The 3rd Asian Spectroscopy Conference
    • Place of Presentation
      Xiamen University, China
    • Year and Date
      2011-11-30
    • Related Report
      2011 Annual Research Report
  • [Presentation] Microsecond Protein Dynamics of Cytochrome c Oxidase as Studied with Resonanc e Raman Spectroscopy2011

    • Author(s)
      Takashi Ogura, et al.
    • Organizer
      The 3rd Asian Spectroscopy Conference
    • Place of Presentation
      Xiamen University, China
    • Year and Date
      2011-11-29
    • Related Report
      2011 Final Research Report
  • [Presentation] Microsecond Protein Dynamics of Cytochrome c Oxidase as Studied with Resonance Raman Spectroscopy2011

    • Author(s)
      Takashi Ogura, et al
    • Organizer
      The 3rd Asian Spectroscopy Conference
    • Place of Presentation
      Xiamen University, China(招待講演)
    • Year and Date
      2011-11-29
    • Related Report
      2011 Annual Research Report
  • [Presentation] 水溶液中のタンパク質の高感度時間分解赤外分光測定2011

    • Author(s)
      久保稔, その他
    • Organizer
      第5回分子科学討論会
    • Place of Presentation
      札幌コンベンションセンター、北海道
    • Year and Date
      2011-09-20
    • Related Report
      2011 Final Research Report
  • [Presentation] 水溶液中のタンパク質の高感度時間分解赤外分光測定2011

    • Author(s)
      久保稔, 他
    • Organizer
      第5回分子科学討論会
    • Place of Presentation
      札幌コンベンションセンター北海道
    • Year and Date
      2011-09-20
    • Related Report
      2011 Annual Research Report
  • [Presentation] ヘム鉄の電子密度がミオグロビンの自動酸化反応に与える影響の解明2011

    • Author(s)
      西村龍, その他
    • Organizer
      錯体化学会第61回討論会
    • Place of Presentation
      岡山理科大学、岡山県
    • Year and Date
      2011-09-18
    • Related Report
      2011 Annual Research Report 2011 Final Research Report
  • [Presentation] Structural analysis of FMN and iron-sulfur clusters of bovine heart NADH-ubiquinone oxidoreductase by resonance Raman spectroscopy2011

    • Author(s)
      Masahide Hikita, et al
    • Organizer
      第49回日本生物物理学会年会
    • Place of Presentation
      兵庫県立大学、兵庫県
    • Year and Date
      2011-09-18
    • Related Report
      2011 Annual Research Report
  • [Presentation] Resonance Raman Study on Cytochrome c Oxida se Reconstituted in Phospholipid Vesicles2011

    • Author(s)
      Takashi Nomura, et al.
    • Organizer
      第49回日本生物物理学会年会
    • Place of Presentation
      兵庫県立大学、兵庫県
    • Year and Date
      2011-09-17
    • Related Report
      2011 Final Research Report
  • [Presentation] Protein Dy namics and Reaction Mechanism of Cytochrome c Oxidase : Resonance R aman Spectroscopy2011

    • Author(s)
      Izumi Ishigami, et al.
    • Organizer
      第49回日本生物物理学会年会
    • Place of Presentation
      兵庫県立大学、兵庫県
    • Year and Date
      2011-09-17
    • Related Report
      2011 Final Research Report
  • [Presentation] Resonance R aman Study on Ligand-Bound Forms of Indoleamine 2, 3-Dioxygenase2011

    • Author(s)
      Masayuki Hara, et al.
    • Organizer
      第49回日本生物物理学会年会
    • Place of Presentation
      兵庫県立大学、兵庫県
    • Year and Date
      2011-09-17
    • Related Report
      2011 Final Research Report
  • [Presentation] Resona nce Raman Study on CO-bound Indol eamine 2, 3-Dioxygenase with Tryp tophan2011

    • Author(s)
      Sachiko Yanagisawa, et al.
    • Organizer
      第49回日本生物物理学会年会
    • Place of Presentation
      兵庫県立大学、兵庫県
    • Year and Date
      2011-09-17
    • Related Report
      2011 Final Research Report
  • [Presentation] The chem ical nature of the ligand at the oxygen reduction site of the rest ing oxidized cytochrome c oxidase2011

    • Author(s)
      Miyuki Sakaguchi, et al.
    • Organizer
      第49回日本生物物理学会年会
    • Place of Presentation
      兵庫県立大学、兵庫県
    • Year and Date
      2011-09-17
    • Related Report
      2011 Final Research Report
  • [Presentation] Protein Dynamics of Cytochrome c Oxidase upon CN-Photolysis as Studied w ith Resonance Raman Spectroscopy2011

    • Author(s)
      Takeshi Nishigaki, et al.
    • Organizer
      第49回日本生物物理学会年会
    • Place of Presentation
      兵庫県立大学、兵庫県
    • Year and Date
      2011-09-17
    • Related Report
      2011 Final Research Report
  • [Presentation] Resonan ce Raman study on the ferryl oxo hemes with imidazole as axilal li gand having a bulky substituent2011

    • Author(s)
      Hirohito Ishimaru, et al.
    • Organizer
      第49回日本生物物理学会年会
    • Place of Presentation
      兵庫県立大学、兵庫県
    • Year and Date
      2011-09-17
    • Related Report
      2011 Final Research Report
  • [Presentation] Structura l analysis of FMN and iron-sulfur clusters of bovine heart NADH-ub iquinone oxidoreductase by resona nce Raman spectroscopy2011

    • Author(s)
      Masahide Hikita, et al.
    • Organizer
      第49回日本生物物理学会年会
    • Place of Presentation
      兵庫県立大学、兵庫県
    • Year and Date
      2011-09-17
    • Related Report
      2011 Final Research Report
  • [Presentation] Resonance Raman Study on Cytochrome c Oxidase Reconstituted in Phospholipid Vesicles2011

    • Author(s)
      Takashi Nomura, et al
    • Organizer
      第49回日本生物物理学会年会
    • Place of Presentation
      兵庫県立大学、兵庫県
    • Year and Date
      2011-09-17
    • Related Report
      2011 Annual Research Report
  • [Presentation] Protein Dynamics and Reaction Mechan sm of Cytochrome c Oxidase : Resonance Raman Spectroscopy2011

    • Author(s)
      Izumi Ishigami, et al
    • Organizer
      第49回日本生物物理学会年会
    • Place of Presentation
      兵庫県立大学、兵庫県
    • Year and Date
      2011-09-17
    • Related Report
      2011 Annual Research Report
  • [Presentation] The chemical nature of the ligand at the oxygen reduction site of the resting oxidized cytochrome c oxidase2011

    • Author(s)
      Miyuki Sakaguchi, et al
    • Organizer
      第49回日本生物物理学会年会
    • Place of Presentation
      兵庫県立大学、兵庫県
    • Year and Date
      2011-09-17
    • Related Report
      2011 Annual Research Report
  • [Presentation] Protein Dynamics of Cytochrome c Oxidase upon CN^- Photolysis as Studied with Resonance Raman Spectroscopy2011

    • Author(s)
      Takeshi Nishigaki, et al
    • Organizer
      第49回日本生物物理学会年会
    • Place of Presentation
      兵庫県立大学、兵庫県
    • Year and Date
      2011-09-17
    • Related Report
      2011 Annual Research Report
  • [Presentation] Resonance Raman study on the ferryl oxo hemes with imidazole as axilal ligand having a bulky substituent2011

    • Author(s)
      Hirohito Ishimaru, et al
    • Organizer
      第49回日本生物物理学会年会
    • Place of Presentation
      兵庫県立大学、兵庫県
    • Year and Date
      2011-09-17
    • Related Report
      2011 Annual Research Report
  • [Presentation] Resonance Raman study on Ligand-Bound Forms of Indoleamine 2, 3-Diocygenase2011

    • Author(s)
      Masayuki Hara, et al
    • Organizer
      第49回日本生物物理学会年会
    • Place of Presentation
      兵庫県立大学、兵庫県
    • Year and Date
      2011-09-16
    • Related Report
      2011 Annual Research Report
  • [Presentation] Resonance Raman Study on CO-bound Indoleamine 2,3-Dioxygenase with Tryptophan2011

    • Author(s)
      Sachiko Yanagisawa, et al
    • Organizer
      第49回日本生物物理学会年会
    • Place of Presentation
      兵庫県立大学、兵庫県
    • Year and Date
      2011-09-16
    • Related Report
      2011 Annual Research Report
  • [Presentation] 共鳴ラマン分光法によるウシ心筋NADH-ユビキノン酸化還元酵素のFMNとFe-Sクラスターの構造解析2011

    • Author(s)
      引田理英, その他
    • Organizer
      第38回生体分子科学討論会
    • Place of Presentation
      筑波大学、茨城県
    • Year and Date
      2011-06-24
    • Related Report
      2011 Annual Research Report 2011 Final Research Report
  • [Presentation] 共鳴ラマン分光法によるインドールアミン2, 3ジオキシゲナーゼの光学異性依存的基質相互作用の検出2011

    • Author(s)
      柳澤幸子, その他
    • Organizer
      第38回生体分子科学討論会
    • Place of Presentation
      筑波大学、茨城県
    • Year and Date
      2011-06-24
    • Related Report
      2011 Final Research Report
  • [Presentation] チトクロム酸化酵素のリガンド解離構造ダイナミクス:新規高精度時間分解赤外分光装置を用いた追跡2011

    • Author(s)
      中島聡, その他
    • Organizer
      第38回生体分子科学討論会
    • Place of Presentation
      筑波大学、茨城県
    • Year and Date
      2011-06-24
    • Related Report
      2011 Annual Research Report 2011 Final Research Report
  • [Presentation] CO光解離をトリガーとしたチトクロムc酸化酵素の構造ダイナミクスの追跡2011

    • Author(s)
      石上泉, その他
    • Organizer
      第38回生体分子科学討論会
    • Place of Presentation
      筑波大学、茨城県
    • Year and Date
      2011-06-24
    • Related Report
      2011 Annual Research Report 2011 Final Research Report
  • [Presentation] 共鳴ラマン分光法によるインドールアミン2,3ジオキシゲナーゼの光学異性依存的基質相互作用の検出2011

    • Author(s)
      柳澤幸子, 他
    • Organizer
      第38回生体分子科学討論会
    • Place of Presentation
      筑波大学、茨城県
    • Year and Date
      2011-06-24
    • Related Report
      2011 Annual Research Report
  • [Presentation] ミオグロビンの機能調節機構の解明2011

    • Author(s)
      西村龍, その他
    • Organizer
      第38回生体分子科学討論会
    • Place of Presentation
      筑波大学、茨城県
    • Year and Date
      2011-06-23
    • Related Report
      2011 Annual Research Report 2011 Final Research Report
  • [Presentation] Resonance Raman st udy on CO-bound indoleamine 2, 3-dioxygenase2011

    • Author(s)
      Takashi Ogura
    • Organizer
      The 3rd Georgian Bay International Conference on Bioi norganic Chemistry
    • Place of Presentation
      Stockey Centre, Parry Sound, Ont ario, Canada
    • Year and Date
      2011-06-01
    • Related Report
      2011 Final Research Report
  • [Presentation] Resonance Raman study on CO-bound indoleamine 2,3-dioxygenase2011

    • Author(s)
      Takashi Ogura
    • Organizer
      The 3rd Georgian Bay International Conference on Bioinorganic Chemistry
    • Place of Presentation
      Stockey Centre, Parry Sound, Ontario, Canada(招待講演)
    • Year and Date
      2011-06-01
    • Related Report
      2011 Annual Research Report
  • [Presentation] ヘム鉄の電子密度の変化を通したミオグロビンの機能調節機構の解明2011

    • Author(s)
      西村龍, その他
    • Organizer
      日本化学会第91春季年会
    • Place of Presentation
      神奈川大学(神奈川県)
    • Year and Date
      2011-03-29
    • Related Report
      2010 Annual Research Report
  • [Presentation] CuA近傍のアミノ酸残基へ部位特異的変異導入をしたチロシナーゼにおけるペルオキソ活性酸素種の特性評価2011

    • Author(s)
      藤枝伸宇, その他
    • Organizer
      日本化学会第91春季年会
    • Place of Presentation
      神奈川大学(神奈川県)
    • Year and Date
      2011-03-29
    • Related Report
      2010 Annual Research Report
  • [Presentation] CuB近傍のアミノ酸残基へ部位特異的変異を導入したチロシナーゼにおけるペルオキソ活性酸素種の特性評価2011

    • Author(s)
      藪田真太郎, その他
    • Organizer
      日本化学会第91春季年会
    • Place of Presentation
      神奈川大学(神奈川県)
    • Year and Date
      2011-03-29
    • Related Report
      2010 Annual Research Report
  • [Presentation] 単核ルテニウムヘテロポリタングステン酸錯体を触媒とする水の酸化反応機構2011

    • Author(s)
      村上将人, その他
    • Organizer
      日本化学会第91春季年会
    • Place of Presentation
      神奈川大学(神奈川県)
    • Year and Date
      2011-03-27
    • Related Report
      2010 Annual Research Report
  • [Presentation] 時間分解共鳴ラマン分光法によるCO光解離後のチトクロムc酸化酵素の構造緩和過程の追跡2011

    • Author(s)
      石上泉, その他
    • Organizer
      日本化学会第91春季年会
    • Place of Presentation
      神奈川大学(神奈川県)
    • Year and Date
      2011-03-27
    • Related Report
      2010 Annual Research Report
  • [Presentation] リン脂質小胞に再構成したチトクロムc酸化酵素の共鳴ラマン分光2011

    • Author(s)
      野村高志, その他
    • Organizer
      日本化学会第91春季年会
    • Place of Presentation
      神奈川大学(神奈川県)
    • Year and Date
      2011-03-27
    • Related Report
      2010 Annual Research Report
  • [Presentation] 高酸化型鉄ポルフィリンの共鳴ラマンスペクトル:軸配位子の陰性度及び2位の嵩高さがFe=O伸縮振動に及ぼす影響2011

    • Author(s)
      石丸裕士, その他
    • Organizer
      日本化学会第91春季年会
    • Place of Presentation
      神奈川大学(神奈川県)
    • Year and Date
      2011-03-27
    • Related Report
      2010 Annual Research Report
  • [Presentation] CO結合型インドールアミン2,3ジオキシゲナーゼへのTrpの光学異性体依存的相互作用の検出:共鳴ラマン分光法2011

    • Author(s)
      柳澤幸子, その他
    • Organizer
      日本化学会第91春季年会
    • Place of Presentation
      神奈川大学(神奈川県)
    • Year and Date
      2011-03-27
    • Related Report
      2010 Annual Research Report
  • [Presentation] 単核銅(II)アルキルペルオキソ錯体の性質に及ぼす配位子の効果2011

    • Author(s)
      太農哲朗, その他
    • Organizer
      日本化学会第91春季年会
    • Place of Presentation
      神奈川大学(神奈川県)
    • Year and Date
      2011-03-26
    • Related Report
      2010 Annual Research Report
  • [Presentation] Resonance Raman study on the oxygenated and the ferryl-oxo species of indoleamine 2,3-dioxygenase during catalytic turnover2010

    • Author(s)
      Takashi Ogura, et al.
    • Organizer
      Faraday Discussions 148, Spectroscopy, Theory and Mechanisms in Bioinorganic Chemistry
    • Place of Presentation
      University of Nottingham (UK)
    • Year and Date
      2010-07-06
    • Related Report
      2010 Annual Research Report
  • [Presentation] インドールアミンジオキシゲナーゼの共鳴ラマンスペクトル2010

    • Author(s)
      柳澤幸子, その他
    • Organizer
      第37回生体分子科学討論会
    • Place of Presentation
      山口大学(山口県)
    • Year and Date
      2010-06-19
    • Related Report
      2010 Annual Research Report
  • [Presentation] Distinct binding geometries of CO to L-Trp- and D-Trp-bound indoleamine 2,3-dioxygenase as probed with resonance Raman spectroscopy2010

    • Author(s)
      Sachiko Yanagisawa, et al.
    • Organizer
      Faraday Discussions 148, Spectroscopy, Theory and Mechanisms in Bioinorganic Chemistry
    • Place of Presentation
      University of Nottingham (UK)
    • Related Report
      2010 Annual Research Report
  • [Presentation] Resonance Raman Identification of a Fe^<IV>=O Type Reaction Intermediate During Indoleamine 2,3-Dioxygenase Reaction2010

    • Author(s)
      Takashi Ogura, et al.
    • Organizer
      The XXII^<th> International Conference on Raman Spectroscopy
    • Place of Presentation
      Boston Park Plaza Hotel (USA)
    • Related Report
      2010 Annual Research Report
  • [Presentation] 高輝度フェムト秒レーザーを用いた時間分解赤外分光装置の開発2010

    • Author(s)
      久保稔, その他
    • Organizer
      分子科学討論会2010
    • Place of Presentation
      大阪大学(大阪府)
    • Related Report
      2010 Annual Research Report
  • [Presentation] ペルオキシダーゼ反応中間体モデル錯体の共鳴ラマンスペクトル2010

    • Author(s)
      石丸裕士, その他
    • Organizer
      第60回錯体化学討論会
    • Place of Presentation
      大阪国際交流センター(大阪府)
    • Related Report
      2010 Annual Research Report
  • [Presentation] Femtosecond-Laser-Based Highly-Sensitive Time-Resolved IR Spectrometer for Studying Enzyme Reactions under Physiological Conditions2010

    • Author(s)
      Minoru Kubo, et al.
    • Organizer
      第48回日本生物物理学会年会
    • Place of Presentation
      東北大学(宮城県)
    • Related Report
      2010 Annual Research Report
  • [Presentation] Resonance Raman study on the oxygenated and the ferryl-oxo species of indoleamine 2,3-dioxygenase2010

    • Author(s)
      Sachiko Yanagisawa, et al.
    • Organizer
      第48回日本生物物理学会年会
    • Place of Presentation
      東北大学(宮城県)
    • Related Report
      2010 Annual Research Report
  • [Presentation] Interaction between Substrate and Dioxygen in the Enzyme/Substrate/Dioxygen Ternary Complex of Indoleamine Dioxygenase as Probed with Resonance Raman Spectroscopy2010

    • Author(s)
      Takashi Ogura, et al.
    • Organizer
      第48回日本生物物理学会年会
    • Place of Presentation
      東北大学(宮城県)
    • Related Report
      2010 Annual Research Report
  • [Presentation] Resonance Raman Evidence for Heme-heme interaction in Cytochrome c Oxidase2010

    • Author(s)
      Miyuki Sakaguchi, et al.
    • Organizer
      第48回日本生物物理学会年会
    • Place of Presentation
      東北大学(宮城県)
    • Related Report
      2010 Annual Research Report
  • [Presentation] Structural Analysis Transcriptional Factor NPAS2 by Resonance Raman Spectroscopy2010

    • Author(s)
      Yuko Misumi, et al.
    • Organizer
      第48回日本生物物理学会年会
    • Place of Presentation
      東北大学(宮城県)
    • Related Report
      2010 Annual Research Report
  • [Presentation] Structural Relaxation of Cytochrome C Oxidase after CO photolysis : Assignment of a Heme Peripheral Raman Mode2010

    • Author(s)
      Izumi Ishigami, et al.
    • Organizer
      第48回日本生物物理学会年会
    • Place of Presentation
      東北大学(宮城県)
    • Related Report
      2010 Annual Research Report
  • [Presentation] インドールアミンジオキシゲナーゼの反応中間体活性部位の構造解析:共鳴ラマン分光法2010

    • Author(s)
      小倉尚志
    • Organizer
      大阪大学蛋白質研究所セミナー:蛋白質の機能-構造相関解明のための精密構造解析とその方法~水素原子から細胞まで~
    • Place of Presentation
      大阪大学(大阪府)
    • Related Report
      2010 Annual Research Report
  • [Presentation] 代謝回転中インドールアミン2,3ジオキシゲナーゼの酸素化型およびフェリルオキソ種の検出2010

    • Author(s)
      柳澤幸子・堀谷正樹・杉本宏・城宜嗣・Appelman, Evan H.・小倉尚志
    • Organizer
      日本化学会第90春季年会
    • Place of Presentation
      東大阪
    • Related Report
      2009 Annual Research Report
  • [Presentation] 高酸化型鉄ポルフィリンの共鳴ラマンスペクトル:Fe=O伸縮振動数の軸配位子依存性2010

    • Author(s)
      石丸裕士・藤井浩・小倉尚志
    • Organizer
      日本化学会第90春季年会
    • Place of Presentation
      東大阪
    • Related Report
      2009 Annual Research Report
  • [Presentation] 共鳴ラマン分光法によるウシ心筋ミトコンドリア呼吸鎖NADH:ユビキノン酸化還元酵素のFMNと鉄-硫黄クラスターの構造解析2009

    • Author(s)
      引田理英, 森山昌和, 小倉尚志, 伊藤-新澤恭子, 吉川信也
    • Organizer
      第36回生体分子科学討論会
    • Place of Presentation
      札幌
    • Related Report
      2009 Annual Research Report
  • [Presentation] 共鳴ラマン分光法によるインドールアミン2,3-ジオキシナーゼの反応中間体の構造解析2009

    • Author(s)
      柳澤幸子, 四ッ谷景子, 橋脇裕美, 堀谷正樹, 杉本宏, 城宜嗣, 小倉尚志
    • Organizer
      第36回生体分子科学討論会
    • Place of Presentation
      札幌
    • Related Report
      2009 Annual Research Report
  • [Presentation] Structure and Dynamics of Cytochrome c Oxidase as Studied with Resonance Raman Spectroscopy2009

    • Author(s)
      小倉尚志
    • Organizer
      The 14^<th> International Conference on Biological Inorganic Chemistry(招待講演)
    • Place of Presentation
      Nagoya
    • Related Report
      2009 Annual Research Report
  • [Presentation] Time-Resolved Resonance Raman Study on Structural Relaxation Process of Cytochrome c Oxidase Following Photolysis of Carbonmonoxide2009

    • Author(s)
      Izumi Ishigami, Satoru Nakashima, Kyoko Shinzawa-Itoh, Shinya Yoshikawa, Takashi Ogura
    • Organizer
      The 14^<th> International Conference on Bioinorganic Chemistry
    • Place of Presentation
      Nagoya
    • Related Report
      2009 Annual Research Report
  • [Presentation] A New Resonance Raman Marker Band of Cytochrome c Oxidase2009

    • Author(s)
      Miyuki Sakaguchi, Kyoko Shinzawa-Itoh, Shinya Yoshikawa, Hiroshi Fujii, Takashi Ogura
    • Organizer
      The 14^<th> International Conference on Bioinorganic Chemistry
    • Place of Presentation
      Nagoya
    • Related Report
      2009 Annual Research Report
  • [Presentation] X-ray Structure and Function of Peroxide Bridge between Fe and Cu in the O_2 Reduction Site of the Fully Oxidized Cytochrome c Oxidase2009

    • Author(s)
      Hiroshi Aoyama, Kazumasa Muramoto, Kyoko Shinzawa-Itoh, Kunio Hirata, Eiki Yamashita, Tomitake Tsukihara, Takashi Ogura, Shinya Yoshikawa
    • Organizer
      The 14^<th> International Conference on Bioinorganic Chemistry
    • Place of Presentation
      Nagoya
    • Related Report
      2009 Annual Research Report
  • [Presentation] Reactivity of Ru(IV)-Oxo Complexes Derived from Proton-Coupled Electron Transfer of Ru(II)-Aqua Complexes2009

    • Author(s)
      Takahiro Kojima, Yuichiro Hirai, Yasuhisa Mizutani, Kenichiro Ikemura, Takashi Ogura, Yoshihito Shiota, Kazunari Yoshizawa, Shunichi Fukuzumi
    • Organizer
      The 14^<th> International Conference on Bioinorganic Chemistry
    • Place of Presentation
      Nagoya
    • Related Report
      2009 Annual Research Report
  • [Presentation] Accurate Design of Copper-containing Oxidase Active Centers with a S-containing Ligand2009

    • Author(s)
      Takashi Tozuka, Yuji Kajita, Minoru Kubo, Takashi Ogura, Yasuhiro Funahashi, Tomohiro Ozawa, Hideki Masuda
    • Organizer
      The 14^<th> International Conference on Bioinorganic Chemistry
    • Place of Presentation
      Nagoya
    • Related Report
      2009 Annual Research Report
  • [Presentation] Structure and Reactivity of Mononuclear Copper(II)-Superoxo Complexes Supported by N_3-Tridentate Ligands2009

    • Author(s)
      Atsushi Kunishita, Hideki Sugimoto, Minoru Kubo, Takashi Ogura, Takeji Takui, Shinobu Itoh
    • Organizer
      The 14^<th> International Conference on Bioinorganic Chemistry
    • Place of Presentation
      Nagoya
    • Related Report
      2009 Annual Research Report
  • [Presentation] Preparation of Low-spin End-on Ferric-Peroxo and Ferric-Hydroperoxo Species by a Heme Model Complex Bearing an Imidazole Tail2009

    • Author(s)
      Jin-Gang Liu, Takehiro Ohta, Satoru Yamaguchi, Takashi Ogura, Yoshinori Naruta
    • Organizer
      The 14^<th> International Conference on Bioinorganic Chemistry
    • Place of Presentation
      Nagoya
    • Related Report
      2009 Annual Research Report
  • [Presentation] Detection of the Iron-Oxygen Stretching Raman Mode for Human Indoleamine 2, 3-Dioxygenase in the Oxygenated Form2009

    • Author(s)
      Sachiko Yanagisawa, Keiko Yotsuya, Masaki Horitani, Hiroshi Sugimoto, Yoshitsugu Shiro, Yumi Hashiwaki, Takashi Ogura
    • Organizer
      The 14^<th> International Conference on Bioinorganic Chemistry
    • Place of Presentation
      Nagoya
    • Related Report
      2009 Annual Research Report
  • [Presentation] C-H Bond Activation by Peroxodiiron(III)Complexes2009

    • Author(s)
      Susumu Kyuda, Yoshimi Kawade, Hideki Furutachi, Shuhei Fujinami, Masatatsu Suzuki, Takehiko Tosha, Teizo Kitagawa, Minoru Kubo, Takashi Ogura
    • Organizer
      The 14^<th> International Conference on Bioinorganic Chemistry
    • Place of Presentation
      Nagoya
    • Related Report
      2009 Annual Research Report
  • [Presentation] Contribution of the Supporting Ligands to NiO_2 Intermediates2009

    • Author(s)
      Jaeheung Cho, Ritimukta Sarangi, Jamespondi Annaraj, Sung Yeon Kim, Minoru Kubo, Takashi Ogura, Edward I.Solomon, Wonwoo Nam
    • Organizer
      The 14^<th> International Conference on Bioinorganic Chemistry
    • Place of Presentation
      Nagoya
    • Related Report
      2009 Annual Research Report
  • [Presentation] Cooperative L-Trp Binding to Human Tryptophan 2, 3-Dioxygenase Revealed by Resonance Raman Spectroscopy2009

    • Author(s)
      Eiko Fukumura, Hiroshi Sugimoto, Yuko Misumi, Takashi Ogura, Yoshitsugu Shiro
    • Organizer
      The 14^<th> International Conference on Bioinorganic Chemistry
    • Place of Presentation
      Nagoya
    • Related Report
      2009 Annual Research Report
  • [Presentation] Detection of the Iron-Oxygen Stretching Raman Mode for Human Indoleamine 2, 3-Dioxygenase in the Oxygenated Form2009

    • Author(s)
      柳澤幸子
    • Organizer
      International Workshop on Metalloprotein Functions
    • Place of Presentation
      Kamigori, Hyogo
    • Related Report
      2009 Annual Research Report
  • [Presentation] Ultraviolet resonance Raman spectroscopy for functioning proteins2009

    • Author(s)
      小倉尚志
    • Organizer
      第47回生物物理学会年会(招待講演)
    • Place of Presentation
      徳島
    • Related Report
      2009 Annual Research Report
  • [Presentation] Site-directed isotope labeling of cytochrome c oxidase2009

    • Author(s)
      Hideo Shimada, Yukie Katayama, Takashi Ogura, Tomitake Tsukihara, Shinya Yoshikawa
    • Organizer
      第47回生物物理学会年会(招待講演)
    • Place of Presentation
      徳島
    • Related Report
      2009 Annual Research Report
  • [Presentation] Resonance Raman Marker Bands of Hydroxyfarnesylethyl Substituent of Cytochrome c Oxidase2009

    • Author(s)
      Miyuki Sakaguchi, Kyoko Shinzawa-Itoh, Shinya Yoshikawa, Hiroshi Fujii, Takashi Ogura
    • Organizer
      第47回生物物理学会年会
    • Place of Presentation
      徳島
    • Related Report
      2009 Annual Research Report
  • [Presentation] Structural Relaxation Process of Cytochrome c Oxidase Following Photolysis of Carbonmonoxide2009

    • Author(s)
      Izumi Ishigami, Satoru Nakashima, Kyoko Shinzawa-Itoh, Shinya Yoshikawa, Takashi Ogura
    • Organizer
      第47回生物物理学会年会
    • Place of Presentation
      徳島
    • Related Report
      2009 Annual Research Report
  • [Presentation] Structural analysis of FMN and iron-sulfer clusters of the bovine heart NADH-ubiquinone oxidoreductase by resonance Raman spectra2009

    • Author(s)
      引田理英, 森山昌和, 小倉尚志, 伊藤-新澤恭子, 吉川信也
    • Organizer
      第47回生物物理学会年会
    • Place of Presentation
      徳島
    • Related Report
      2009 Annual Research Report
  • [Presentation] Non-Resonance Raman Investigations of Bovine Mitochondrial F_oF_1-ATPsynthase2009

    • Author(s)
      Kaoru Mieda, Minoru Kubo, Kyoko Shinzawa-Itoh, Takashi Ogura, Shinya Yoshikawa
    • Organizer
      第47回生物物理学会年会
    • Place of Presentation
      徳島
    • Related Report
      2009 Annual Research Report
  • [Presentation] Detection of Two Oxygen-Isotope Sensitive Resonance Raman Bands for Human Indoleamine 2, 3-Dioxygenase2009

    • Author(s)
      柳澤幸子, 四ッ谷景子, 橋脇裕美, 堀谷正樹, 杉本宏, 城宜嗣, 小倉尚志
    • Organizer
      第47回生物物理学会年会
    • Place of Presentation
      徳島
    • Related Report
      2009 Annual Research Report
  • [Presentation] Protein Dynamics of Cytochrome c Oxidase as Studied with Resonance Raman Spectroscopy2009

    • Author(s)
      Takashi Ogura, Satoru Nakashima, Izumi Ishigami, Kyoko Shinzawa-Itoh, Shinya Yoshikawa
    • Organizer
      Symposium on Advanced Biological Inorganic Chemistry(招待講演)
    • Place of Presentation
      Mumbai, India
    • Related Report
      2009 Annual Research Report
  • [Remarks] ホームページ:(研究一覧:

    • URL

      http://lib.laic.u-hyogo.ac.jp/laic/2/annual_list.html

    • Related Report
      2011 Final Research Report
  • [Remarks] 市民講演会開催「ピコバイオロジー:原子レベルの生命科学」「ナノ」よりミクロな「ピコ」、「ピコバイオロジー」ってなんだろう。第49回日本生物物理学会年会実行委員会主催、平成23年9月19日、姫路商工会議所、兵庫県。

    • URL

      http://www.sci.u-hyogo.ac.jp/life/GCOE/index-j.html

    • Related Report
      2011 Final Research Report
  • [Remarks]

    • URL

      http://www.sci.u-hyogo.ac.jp/

    • Related Report
      2011 Annual Research Report
  • [Remarks]

    • URL

      http://www.sci.u-hyogo.ac.jp/life/biophys2/MolBiophys_II_main/home_j.html

    • Related Report
      2010 Annual Research Report
  • [Remarks]

    • URL

      http://www.sci.u-hyogo.ac.jp/life/biophys2/MolBiophys_II_main/home.html

    • Related Report
      2009 Annual Research Report

URL: 

Published: 2009-04-01   Modified: 2016-04-21  

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