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Mechanisms of oxidative protein folding in the periplasm of E. coli

Research Project

Project/Area Number 21580092
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Applied microbiology
Research InstitutionNara Institute of Science and Technology

Principal Investigator

KADOKURA Hiroshi  奈良先端科学技術大学院大学, バイオサイエンス研究科, 研究員 (70224558)

Project Period (FY) 2009 – 2011
Project Status Completed (Fiscal Year 2011)
Budget Amount *help
¥4,810,000 (Direct Cost: ¥3,700,000、Indirect Cost: ¥1,110,000)
Fiscal Year 2011: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2010: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2009: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Keywordsジスルフィド結合 / 立体構造形成 / 分泌 / DsbA / ペリプラズム / 外膜 / 微生物機能 / ジスルフィド
Research Abstract

Disulfide bonds, formed between pairs of cysteines, are important for the folding,activity, and stability of many secretory and membrane proteins. In a bacterium Escherichia coli, an enzyme called DsbA introduces disulfide bonds into folding proteins in the periplasm. In this study, I detected, in vivo, the intermediates of disulfide bond formation that were formed between DsbA and its substrates. Detailed characterization of the intermediates revealed a number of new insights into protein folding in this cellular compartment.

Report

(4 results)
  • 2011 Annual Research Report   Final Research Report ( PDF )
  • 2010 Annual Research Report
  • 2009 Annual Research Report
  • Research Products

    (21 results)

All 2013 2012 2011 2010 2009 Other

All Journal Article (9 results) (of which Peer Reviewed: 8 results) Presentation (11 results) (of which Invited: 1 results) Remarks (1 results)

  • [Journal Article] rearrangement triggered by translocon assembly controls lipopolysaccharide export2012

    • Author(s)
      Chng, S.S., Xue, M., Garner, R.A.,Kadokura, H., Boyd, D., Beckwith, J.,Kahne, D. Disulfide
    • Journal Title

      Science

      Volume: 337 Pages: 1665-1668

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Disulfide rearrangement triggered by translocon assembly controls lipopolysaccharide export.2012

    • Author(s)
      Chng, S.S.
    • Journal Title

      Science

      Volume: 337 Issue: 6102 Pages: 1665-1668

    • DOI

      10.1126/science.1227215

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Mechanisms of oxidative protein folding in the bacterial cell envelope. Antioxid2010

    • Author(s)
      Kadokura, H., Beckwith, H.
    • Journal Title

      Redox Signal

      Volume: 13 Pages: 1231-1246

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] The L-cysteine/L-cystine shuttle system provides reducing equivalents to the periplasm in Escherichia coli2010

    • Author(s)
      Ohtsu, I., Wiriyathanawudhiwong, N.,Morigasaki, S., Nakatani, T., Kadokura H., Takagi H.
    • Journal Title

      J. Biol. Chem

      Volume: 285 Pages: 17479-17487

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] 分泌タンパク質にジスルフィド結合を形成する仕組み:ジスルフィド結合形成反応中間体の検出2010

    • Author(s)
      門倉 広
    • Journal Title

      化学と生物

      Volume: 48 Pages: 695-705

    • NAID

      10026712890

    • Related Report
      2011 Final Research Report 2010 Annual Research Report
  • [Journal Article] Mechanisms of oxidative protein folding in the bacterial cell envelope2010

    • Author(s)
      Kadokura, H.
    • Journal Title

      Antioxid.Redox Signal.

      Volume: 13 Pages: 1231-1246

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The L-cysteine/L-cystine shuttle system provides reducing equivalents to the periplasm in Escherichia coli2010

    • Author(s)
      Ohtsu, I.
    • Journal Title

      J.Biol.Chem.

      Volume: 285 Pages: 17479-17487

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Detecting folding intermediates of a protein as it passes through the bacterial translocation channel2009

    • Author(s)
      Kadokura, H., Beckwith, J.
    • Journal Title

      Cell

      Volume: 138 Pages: 1164-1173

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Detecting folding intermediates of a protein as it passes through the bacterial translocation channel.2009

    • Author(s)
      Kadokura, H., Beckwith, J.
    • Journal Title

      Cell

      Volume: 138 Pages: 1164-1173

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Presentation] 哺乳動物細胞小胞体におけるジスルフィド結合形成を解析する為の新規レポーターの作成2013

    • Author(s)
      門倉 広、河野憲二
    • Organizer
      日本農芸化学会2012 年度大会
    • Place of Presentation
      京都女子大学
    • Year and Date
      2013-03-23
    • Related Report
      2011 Final Research Report
  • [Presentation] 反応中間体の解析から見えてきた、生体内における分泌蛋白質の酸化的フォールディングの仕組み2011

    • Author(s)
      門倉 広、Jon Beckwith、河野憲二
    • Organizer
      第84回 日本生化学会大会
    • Place of Presentation
      京都国際会館
    • Year and Date
      2011-09-21
    • Related Report
      2011 Final Research Report
  • [Presentation] Developing a genetic assay for the analysis of disulfide bond formation in the ER of mammalian cells2011

    • Author(s)
      Kadokura, H.
    • Organizer
      Microbial Genetics and Genomics V
    • Place of Presentation
      Harvard Medical School in Boston; Oral
    • Year and Date
      2011-05-01
    • Related Report
      2011 Final Research Report
  • [Presentation] Mechanisms of oxidative protein folding in vivo: Novel features revealed by the analysis of disulfide- linked enzyme-substrate complexes2010

    • Author(s)
      Kadokura, H.
    • Organizer
      The 3rd International Symposium on Protein Community
    • Place of Presentation
      Hotel Nikko Nara;Oral, Invited presentation
    • Year and Date
      2010-09-14
    • Related Report
      2011 Final Research Report
  • [Presentation] Mechanisms of oxidative protein folding in vivo : Novel features revealed by the analysis of disulfide-linked enzyme-substrate complexes2010

    • Author(s)
      Kadokura, H.
    • Organizer
      第3回タンパク質社会の国際会議
    • Place of Presentation
      ホテル日航奈良(国際会議招待講演)
    • Year and Date
      2010-09-14
    • Related Report
      2010 Annual Research Report
  • [Presentation] 生体内で分泌蛋白質にジスルフィド結合を形成する仕組み:ジスルフィド結合形成反応中間体の検出およびその解析2010

    • Author(s)
      門倉 広
    • Organizer
      第10回日本蛋白質学会大会
    • Place of Presentation
      札幌コンベンションセンター
    • Year and Date
      2010-06-16
    • Related Report
      2011 Final Research Report
  • [Presentation] 生体内で分泌蛋白質にジスルフィド結合を形成する仕組み:ジスルフィド結合形成反応中間体の検出およびその解析2010

    • Author(s)
      門倉広
    • Organizer
      第10回日本蛋白質学会大会
    • Place of Presentation
      札幌コンベンションセンター(招待講演)
    • Year and Date
      2010-06-16
    • Related Report
      2010 Annual Research Report
  • [Presentation] 生体内における分泌タンパク質ジスルフィド結合形成反応中間体の解析2010

    • Author(s)
      門倉 広、河野憲二、Jon Beckwith
    • Organizer
      日本農芸化学会2010 年度大会
    • Place of Presentation
      東京大学駒場キャンパス
    • Year and Date
      2010-03-29
    • Related Report
      2011 Final Research Report
  • [Presentation] 生体内における分泌タンパク質ジスルフィド結合形成反応中間体の解析2010

    • Author(s)
      門倉広、河野憲二、Beckwith, Jon
    • Organizer
      日本農芸化学会
    • Place of Presentation
      東京大学駒場キャンパス(東京都)
    • Year and Date
      2010-03-29
    • Related Report
      2009 Annual Research Report
  • [Presentation] 哺乳動物細胞小胞体におけるジスルフィド結合形成を解析する為の新規レポーターの作成

    • Author(s)
      門倉 広
    • Organizer
      日本農芸化学会2012年度大会
    • Place of Presentation
      京都女子大学
    • Related Report
      2011 Annual Research Report
  • [Presentation] 反応中間体の解析から見えてきた、生体内における分泌蛋白質の酸化的フォールディングの仕組み

    • Author(s)
      門倉 広
    • Organizer
      日本生化学会大会
    • Place of Presentation
      京都国際会館
    • Related Report
      2011 Annual Research Report
    • Invited
  • [Remarks] ホームページアドレス

    • URL

      http://bsw3.naist.jp/kouno/kouno.html

    • Related Report
      2011 Final Research Report

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Published: 2009-04-01   Modified: 2016-04-21  

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