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Molecular evolution of the TLR4 gene in the course of primate evolution and their sensitivities to the response to endotoxin

Research Project

Project/Area Number 21590356
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Human genetics
Research InstitutionTokyo Medical and Dental University

Principal Investigator

NAKAJIMA Toshiaki  東京医科歯科大学, 大学院・疾患生命科学研究部, 准教授 (50307956)

Co-Investigator(Kenkyū-buntansha) KIMURA Akinori  東京医科歯科大学, 難治疾患研究所, 教授 (60161551)
Project Period (FY) 2009 – 2011
Project Status Completed (Fiscal Year 2011)
Budget Amount *help
¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2011: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2010: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2009: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Keywords分子遺伝学 / TLR(Toll-like receptor) / エンドトキシン / 霊長類 / バージャー病 / TLR (Toll-like receptor)
Research Abstract

The innate immune system constitutes the front line of host defense against pathogens. Toll-like receptor 4(TLR4) recognize molecules derived from pathogens and play crucial roles in the innate immune system. Here we provide evidence that the TLR4 gene have come under natural selection pressure in the course of primate evolution. We compared the nucleotide sequences of TLR4 gene among seven primate species. Analysis of the non-synonymous/synonymous substitution ratio revealed the presence of both strictly conserved and rapidly evolving regions in the TLR4 gene. The genomic segments encoding the intracellular Toll/interleukin 1 receptor(TIR) domains, which exhibited lower rates of non-synonymous substitution, have undergone purifying selection. In contrast, the extracellular domain of TLR4, which carried an unusually high proportion of non-synonymous substitutions, was found to have been the target of positive Darwinian selection in primate evolution. However, the 3D structural prediction showed no difference in the 3D structure of extracellular domain of TLR4 among seven primate species. We also reported the association of MYD88 with the susceptibility to Buerger's disease.

Report

(4 results)
  • 2011 Annual Research Report   Final Research Report ( PDF )
  • 2010 Annual Research Report
  • 2009 Annual Research Report
  • Research Products

    (9 results)

All 2011 2010 2009

All Journal Article (7 results) (of which Peer Reviewed: 3 results) Book (2 results)

  • [Journal Article] A single nucleotide polymorphism in the 3'-untranslated region of MyD88 gene is associated with Buerger disease but not with Takayasu arteritis in Japanese2011

    • Author(s)
      Chen Z, Nakajima T, Inoue Y, Kudo T, Jibiki M, Iwai T, Kimura A
    • Journal Title

      J Hum Genet

      Volume: 56(7) Pages: 545-547

    • NAID

      10030660317

    • Related Report
      2011 Final Research Report
  • [Journal Article] Toll-like receptor 2 gene polymorphisms associated with aggressive periodontitis in Japanese2011

    • Author(s)
      Takahashi M, Chen Z, Watanabe K, Kobayashi H, Nakajima T, Kimura A, Izumi Y
    • Journal Title

      Open Dent J

      Volume: 5 Pages: 190-194

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
  • [Journal Article] Molecular evolution of immunoglobulin superfamily genes in primates2011

    • Author(s)
      Ohtani H, Nakajima T, Akari H, Ishida T, Kimura A
    • Journal Title

      Immunogenetics

      Volume: 63(7) Pages: 417-428

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
  • [Journal Article] A single nucleotide polymorphism in the 3'-untranslated region of MyD 88 gene is associated with Buerger disease but not with Takayasu arteritis in Japanese2011

    • Author(s)
      Chen Z, Nakajima T, Inoue Y, Kudo T, Jibiki M, Iwai T, Kimura A
    • Journal Title

      J Hum Genet

      Volume: 56 Issue: 7 Pages: 545-547

    • DOI

      10.1038/jhg.2011.44

    • NAID

      10030660317

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Losartan inhibits LPS-induced inflammatory signaling by PPAR-gamma-dependent mechanism inhuman THP-1 macrophage2010

    • Author(s)
      An J, Nakajima T, Kuba K, Kimura A
    • Journal Title

      Hypertension Res

      Volume: 33(8) Pages: 831-835

    • Related Report
      2011 Final Research Report
  • [Journal Article] Losartan inhibits LPS-induced inflammatory signaling by PPAR-gamma-dependent mechanism in human THP-1 macrophage.2010

    • Author(s)
      An J, Nakaiima T, Kuba K, Kimura A
    • Journal Title

      Hypertension Res.

      Volume: 33(8) Pages: 831-835

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Losartan inhibits LPS-induced inflammatory signaling by PPAR-gamma-dependent mechanism in human THP-1 macrophage2010

    • Author(s)
      An J, Nakajima T, Kuba K, Kimura A
    • Journal Title

      Hypertension Res. (In press)

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Book] Comparative genomics : insight into human health and disease. In The HLA Complex in Biology and Medicine : aresource book2009

    • Author(s)
      Nakajima T, Kimura A
    • Publisher
      Jaypee Brothers Medical Publishers(P) Ltd.
    • Related Report
      2011 Final Research Report
  • [Book] Comparative genomics : insight into human health and disease. In The HLA Complex in Biology and Medicine : a resource book2009

    • Author(s)
      Nakajima T, Kimura A
    • Total Pages
      24
    • Publisher
      Jaypee Brothers Medical Publishers (P) Ltd.
    • Related Report
      2009 Annual Research Report

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Published: 2009-04-01   Modified: 2016-04-21  

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