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Prediction of tumor dynamics using amountof serum methylated DNA in human hepatocellular carcinoma

Research Project

Project/Area Number 21590840
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Gastroenterology
Research InstitutionKinki University (2011)
Kyoto University (2009-2010)

Principal Investigator

NISHIDA Naoshi  近畿大学, 医学部, 准教授 (60281755)

Co-Investigator(Renkei-kenkyūsha) NISHIMURA Takafumi  京都大学, 大学院・医学研究科, 講師 (40378732)
FUKUDA Yoshihiro  京都大学, 大学院・医学研究科, 教授 (50127130)
Project Period (FY) 2009 – 2011
Project Status Completed (Fiscal Year 2011)
Budget Amount *help
¥4,550,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥1,050,000)
Fiscal Year 2011: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2010: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2009: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Keywords肝臓学 / 肝細胞癌 / 診断 / 腫瘍マーカー / エピジェネティクス / 癌抑制遺伝子 / 癌 / ゲノム / 内科 / 肝癌 / DNAメチル化 / 血清診断
Research Abstract

We applied tumor specific methylated DNA for prediction of tumor dynamics in HCC cases. The methylated APC and GSTP1 genes were identified as useful marker for discrimination of HCC cells from non-cancerous liver. We established a sensitive assay for quantifying of methylated/non-methylated(Me/NMe) DNA ratio from serum of 100μl. We successfullydetect Me-DNA from all HCC cases examined and no normal control cases showed Me-DNA. The Me/NMe DNA ratio elevated quicker than conventional HCC marker, AFP, when tumor showed recurrence. This novel assay could be a promising approachfor judgmentof theraupic effectof HCCincluding dormant therapy.

Report

(4 results)
  • 2011 Annual Research Report   Final Research Report ( PDF )
  • 2010 Annual Research Report
  • 2009 Annual Research Report
  • Research Products

    (42 results)

All 2011 2010 2009 Other

All Journal Article (11 results) (of which Peer Reviewed: 8 results) Presentation (26 results) Book (3 results) Remarks (2 results)

  • [Journal Article] Genetic and epigenetic signature of human hepatocellular carcinoma : A systematic Review2011

    • Author(s)
      Nishida N, Goel A
    • Journal Title

      Current Genomics

      Volume: 12 Pages: 130-137

    • NAID

      120004205252

    • URL

      http://www.ncbi.nlm.nih.gov/pubmed/21966251

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Genetic and epigenetic signature of human hepatocellular carcinoma : A systematic Review.2011

    • Author(s)
      Nishida N, Goel A
    • Journal Title

      Current Genomics

      Volume: (In press)

    • NAID

      120004205252

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Impact of Hepatitis Virus and Aging on DNA Methylation in Human Hepatocarcinogenesis2010

    • Author(s)
      Nishida N
    • Journal Title

      Histol. Histopatho

      Volume: 125 Pages: 647-654

    • URL

      http://www.ncbi.nlm.nih.gov/pubmed/20238302

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Possible involvement of T helper type 2 responses to Toll-like receptor ligands in IgG4-related sclerosing disease.2010

    • Author(s)
      Akitake R, Watanabe T, Zaima C, Uza N, Ida H, Tada S, Nishida N, Chiba T.
    • Journal Title

      Gut

      Volume: 59 Issue: 4 Pages: 542-5

    • DOI

      10.1136/gut.2009.200972

    • NAID

      120002191881

    • Related Report
      2011 Final Research Report 2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Impact of Hepatitis Virus and Aging on DNA methylation in human hepatocarcinogenesis2010

    • Author(s)
      Nishida N
    • Journal Title

      Histol.Histopathol.

      Volume: 25 Pages: 647-654

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Impact of Hepatitis Virus and Aging on DNA methylation in human hepatocarcinogenesis2010

    • Author(s)
      Nishida-N
    • Journal Title

      Histol. Histopathol. 25

      Pages: 647-654

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Analysis of fecal DNA methylation for detecting gastrointestinal neoplasia2009

    • Author(s)
      Nagasaka T, Tanaka N, Cullings H, Sun D, Sasamoto H, Uchida T, Koi M, Nishida N, Boland CR, Matsubara N, and Goel A
    • Journal Title

      J Natl Cancer Inst

      Volume: 101 Pages: 1224-1258

    • URL

      http://www.ncbi.nlm.nih.gov/pubmed/19700653

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Analysis of fecal DNA methylation for detecting gastrointestinal neoplasia2009

    • Author(s)
      Nagasaka-T, Nishida-N, et al
    • Journal Title

      J Natl. Cancer Inst. 101

      Pages: 1224-1258

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 慢性肝炎におけるDNAメチル化と発癌2009

    • Author(s)
      西田直生志
    • Journal Title

      GI Cancer Research 17

      Pages: 312-319

    • Related Report
      2009 Annual Research Report
  • [Journal Article] 遺伝子異常と肝発癌、癌抑制遺伝子2009

    • Author(s)
      西田直生志
    • Journal Title

      日本臨床増刊号、肝癌 67

      Pages: 176-185

    • Related Report
      2009 Annual Research Report
  • [Journal Article]2009

    • Author(s)
      飯田三雄
    • Journal Title

      消化器病学の進歩-原点から未来への情報発信、III巻 複合頷域(医学書院)

      Pages: 54-64

    • Related Report
      2009 Annual Research Report
  • [Presentation] C型慢性肝炎組織における癌抑制遺伝子メチル化と肝発癌2011

    • Author(s)
      西田直生志
    • Organizer
      第19回日本消化器関連学会週間(第15回日本肝臓学会大会).ワークショップ14 :エピジェネティックスと消化器癌
    • Place of Presentation
      福岡
    • Related Report
      2011 Final Research Report
  • [Presentation] C型肝炎関連発癌の初期段階における癌抑制遺伝子の異常メチル化の役割2011

    • Author(s)
      西田直生志, 他
    • Organizer
      第47回日本肝臓学会総会、シンポジウム1 :ウイルス肝炎.肝癌制圧の分子基盤
    • Place of Presentation
      東京
    • Related Report
      2011 Final Research Report
  • [Presentation] Characterization of step-wise accumulation of DNA methylation alterations during human hepatocarcinogenesis(DDW Poster of Distinction).2011

    • Author(s)
      Nishida N, et. al
    • Organizer
      81th Digestive Disease
    • Place of Presentation
      Chicago, IL
    • Related Report
      2011 Final Research Report
  • [Presentation] Impacton aberrant methylation of an unique subset of tumor suppressor genes on the initial steps of human hepatocarcinogenesis2011

    • Author(s)
      Nishida N., et. al.
    • Organizer
      62th Annual meeting of the American Association for the Study of Liver Diseases(AASLD). Parallel Session 31 : Mechanism of hepatic carcinogenesis
    • Place of Presentation
      San Francisco, CA
    • Related Report
      2011 Final Research Report
  • [Presentation] Genetic and epigenetic analysis for the prediction of recurrent hepatocellular carcinoma after liver transplantation2011

    • Author(s)
      西村貴文, 他
    • Organizer
      第70回日本癌学会学術総会
    • Place of Presentation
      名古屋
    • Related Report
      2011 Final Research Report
  • [Presentation] Impact on aberrant methylation of an unique subset of tumor suppressor genes on the initial steps of human hepatocarcinogenesis2011

    • Author(s)
      Nishida N., et al
    • Organizer
      62th Annual meeting of the American Association for the Study of Liver Diseases (AASLD). Parallel Session 31 : Mechanism of hepatic carcinogenesis
    • Place of Presentation
      San Francisco, CA
    • Related Report
      2011 Annual Research Report
  • [Presentation] Characterization of step-wise accumulation of DNA methylation alterations during human hepatocarcinogenesis2011

    • Author(s)
      Nishida N., et al
    • Organizer
      81th Digestive Disease Week (DDW)
    • Place of Presentation
      Chicago, IL
    • Related Report
      2011 Annual Research Report
  • [Presentation] C型慢性肝炎組織における癌抑制遺伝子メチル化と肝発癌2011

    • Author(s)
      西田直生志
    • Organizer
      第19回日本消化器関連学会週間(第15回日本肝臓学会大会)ワークショップ14:エピジェネティックスと消化器癌
    • Place of Presentation
      福岡(福岡国際会議場)
    • Related Report
      2011 Annual Research Report
  • [Presentation] C型肝炎関連発癌の初期段階における癌抑制遺伝子の異常メチル化の役割2011

    • Author(s)
      西田直生志, 他
    • Organizer
      第47回日本肝臓学会総会シンポジウム1:ウイルス肝炎・肝癌制圧の分子基盤
    • Place of Presentation
      東京(ホテルグランパシフィック)
    • Related Report
      2011 Annual Research Report
  • [Presentation] ヒト肝発癌過程におけるゲノムoエピゲノムの包括的解析2010

    • Author(s)
      西田直生志, 他
    • Organizer
      第18回日本消化器関連学会週間(第14回日本肝臓学会大会).シンポジウム17 :肝癌のメカニズムと治療戦略
    • Place of Presentation
      横浜
    • Year and Date
      2010-10-13
    • Related Report
      2011 Final Research Report
  • [Presentation] 血清中の肝癌由来DNAの定量化と治療マーカーへの応用2010

    • Author(s)
      西田直生志, 他
    • Organizer
      第18回日本消化器関連学会週間(第14回日本肝臓学会大会).ワークショップ7 :肝細胞癌に対する新たな診断・治療マーカーの確立
    • Place of Presentation
      横浜
    • Year and Date
      2010-10-13
    • Related Report
      2011 Final Research Report
  • [Presentation] 肝癌症例における血中メチル化DNAを用いた腫瘍ダイナミクスの推定2010

    • Author(s)
      西田直生志, 他
    • Organizer
      第46回日本肝臓学会総会
    • Place of Presentation
      山形
    • Year and Date
      2010-05-28
    • Related Report
      2011 Final Research Report 2010 Annual Research Report
  • [Presentation] 肝細胞癌に対する生体肝移植後の転移再発予測因子としての遺伝子メチル化の検討2010

    • Author(s)
      西村貴文, 他
    • Organizer
      第69回日本癌学会総会
    • Place of Presentation
      大阪
    • Related Report
      2011 Final Research Report
  • [Presentation] Epigenetic Alterations during HCV-related human hepatocarcinogenesis and its clinical implication.(Invited speaker)2010

    • Author(s)
      Nishida N
    • Organizer
      World Congress of Virus and Infections 2010, Hepatitis C Symposium
    • Place of Presentation
      Busan, Korea
    • Related Report
      2011 Final Research Report
  • [Presentation] Epigenetic Alterations during HCV-related human hepatocarcinogenesis and its clinical implication2010

    • Author(s)
      Nishida N
    • Organizer
      World Congress of Virus and Infections 2010, Hepatitis C Symposium.
    • Place of Presentation
      Busan, Korea
    • Related Report
      2010 Annual Research Report
  • [Presentation] ヒト肝発癌過程におけるゲノム・エピゲノムの包括的解析2010

    • Author(s)
      西田直生志、福田善弘
    • Organizer
      第18回日本消化器関連学会週間(第14回日本肝臓学会大会)、シンポジウム17:肝癌のメカニズムと治療戦略
    • Place of Presentation
      横浜
    • Related Report
      2010 Annual Research Report
  • [Presentation] 血清中の肝癌由来DNAの定量化と治療マーカーへの応用2010

    • Author(s)
      西田直生志、福田善弘
    • Organizer
      第18回日本消化器関連学会週間(第14回日本肝臓学会大会)、ワークショップ7:肝細胞癌に対する新たな診断・治療マーカーの確立
    • Place of Presentation
      横浜
    • Related Report
      2010 Annual Research Report
  • [Presentation] E肝細胞癌に対する生体肝移植後の転移再発予測因子としての遺伝子メチル化の検討2010

    • Author(s)
      西村貴文、西田直生志、上本伸二、福田善弘
    • Organizer
      第69回日本癌学会総会
    • Place of Presentation
      大阪
    • Related Report
      2010 Annual Research Report
  • [Presentation] 肝発癌過程における遺伝子メチル化の変化2009

    • Author(s)
      西田直生志, 他
    • Organizer
      第17回日本消化器関連学会週間(第13回日本肝臓学会大会).シンポジウム6 :消化器癌におけるエピジェネティクス
    • Place of Presentation
      京都
    • Year and Date
      2009-10-14
    • Related Report
      2011 Final Research Report
  • [Presentation] 肝発癌過程における遺伝子メチル化の変化2009

    • Author(s)
      西田直生志
    • Organizer
      第13回日本消化器関連学会週間、第13回日本肝臓学会大会 シンポジウム6
    • Place of Presentation
      京都
    • Year and Date
      2009-10-14
    • Related Report
      2009 Annual Research Report
  • [Presentation] C型肝炎ウイルスによる肝発癌とDNAメチル化の不安定性(Invited speaker)2009

    • Author(s)
      西田直生志
    • Organizer
      第9回肝疾患フォーラム学術集会
    • Place of Presentation
      大阪
    • Year and Date
      2009-10-10
    • Related Report
      2011 Final Research Report
  • [Presentation] C型肝炎ウイルスによる肝発癌とDNAメチル化の不安定性2009

    • Author(s)
      西田直生志
    • Organizer
      第9回肝疾患フォーラム
    • Place of Presentation
      大阪
    • Year and Date
      2009-10-10
    • Related Report
      2009 Annual Research Report
  • [Presentation] 肝臓癌の発生と遺伝子異常-エピジェネティクスの面からみた肝癌診療への応用(Invited speaker)2009

    • Author(s)
      西田直生志
    • Organizer
      日本消化器病学会近畿支部例会.第30回教育公演会
    • Place of Presentation
      京都
    • Year and Date
      2009-06-28
    • Related Report
      2011 Final Research Report
  • [Presentation] 肝臓癌の発生と遺伝子異常・エピジェネティクスからみた肝癌診療への応用2009

    • Author(s)
      西田直生志
    • Organizer
      日本消化器病学会近畿支部例会教育公演会
    • Place of Presentation
      京都
    • Year and Date
      2009-06-28
    • Related Report
      2009 Annual Research Report
  • [Presentation] 肝発癌過程における遺伝子メチル化の変化と肝癌診断への応用2009

    • Author(s)
      西田直生志, 他
    • Organizer
      第45回日本肝臓学会総会
    • Place of Presentation
      神戸
    • Year and Date
      2009-06-05
    • Related Report
      2011 Final Research Report
  • [Presentation] 肝発癌過程における遺伝子メチル化の変化と肝癌診断への応用2009

    • Author(s)
      西田直生志
    • Organizer
      第45回日本肝臓学会総会 ワークショップ7
    • Place of Presentation
      神戸
    • Year and Date
      2009-06-05
    • Related Report
      2009 Annual Research Report
  • [Book] 肝臓フォーラム(西部)記録刊行会2010

    • Author(s)
      西田直生志
    • Publisher
      医事出版社
    • Related Report
      2011 Final Research Report
  • [Book] 肝発癌における染色体不安定性とメチル化不安定性の関わり-肝臓フォーラム(西部)記録刊行会2010

    • Author(s)
      西田直生志
    • Total Pages
      5
    • Publisher
      医事出版社
    • Related Report
      2010 Annual Research Report
  • [Book] 消化器病学の進歩ー原点から未来への情報発信、III巻-複合領域2009

    • Author(s)
      西田直生志
    • Publisher
      医学書院
    • Related Report
      2011 Final Research Report
  • [Remarks]

    • URL

      http://www.med.kindai.ac.jp/shoukaki/

    • Related Report
      2011 Final Research Report
  • [Remarks]

    • URL

      http://www.med.kindai.ac.jp/shoukaki/

    • Related Report
      2011 Annual Research Report

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Published: 2009-04-01   Modified: 2016-04-21  

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