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Comparative evolutionary studies on three-dimensionally positioning of the chromosome territories in the primate iPS cell nuclei

Research Project

Project/Area Number 21602002
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Stem cell biology and medical science
Research InstitutionThe Graduate University for Advanced Studies

Principal Investigator

TANABE Hideyuki  総合研究大学院大学, 先導科学研究科, 准教授 (50261178)

Co-Investigator(Renkei-kenkyūsha) HIRAI Hirohisa  京都大学, 霊長類研究所, 教授 (10128308)
Project Period (FY) 2009 – 2011
Project Status Completed (Fiscal Year 2011)
Budget Amount *help
¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2011: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2010: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2009: ¥2,600,000 (Direct Cost: ¥2,000,000、Indirect Cost: ¥600,000)
Keywords染色体テリトリー / 3D-FISH法 / 核内配置 / 細胞分化 / 遺伝子ポジショニング / 霊長類iPS細胞 / ゲノム配置 / 生細胞蛍光観察
Research Abstract

In this study from the viewpoint of spatial positioning of chromosome territories and genomic regions within the nucleus I would try to find the molecular mechanism of why the iPS cells are established and to identify what the human specific characteristics have been appeared during the course of primate evolution by comparative analysis in human and great apes. Analysis by 3D-FISH technique using the DNA probes with Oct3/4, Sox2, Klf4, c-Myc, and Nanog, and their chromosomal paints onto human, chimpanzee, gorilla, and orangutan fibroblast cell nuclei, basic characteristics of spatial arrangements have been revealed but analysis has not yet been carried out due to shortage of primate iPS cells. When accumulating iPS cells, I would perform the analyses and discuss the issues.

Report

(4 results)
  • 2011 Annual Research Report   Final Research Report ( PDF )
  • 2010 Annual Research Report
  • 2009 Annual Research Report
  • Research Products

    (15 results)

All 2011 2010 2009 Other

All Presentation (11 results) Remarks (4 results)

  • [Presentation] Role of spatial positioning of chromosome territories in the genome evolution2011

    • Author(s)
      Hideyuki Tanabe
    • Organizer
      SMBE 2011 Kyoto Conference(Annual Conference of Society for Molecular Biology and Evolution)
    • Place of Presentation
      Kyoto University Clock Tower Centennial Hall
    • Year and Date
      2011-07-28
    • Related Report
      2011 Final Research Report
  • [Presentation] Role of spatial positioning of chromosome territories in the genome evolution2011

    • Author(s)
      Hideyuki Tanabe
    • Organizer
      SMBE 2011 Kyoto Conference (Annual Conference of Society for Molecular Biology and Evolution)
    • Place of Presentation
      Kyoto University Clock Tower Centennial Hall(Invited speaker)
    • Year and Date
      2011-07-28
    • Related Report
      2011 Annual Research Report
  • [Presentation] 細胞核と染色体構造の動態:核内空間配置に関する分子基盤について2011

    • Author(s)
      田辺秀之
    • Organizer
      第5回日本エピジェネティクス研究会年会
    • Place of Presentation
      KKRホテル熊本
    • Year and Date
      2011-05-19
    • Related Report
      2011 Final Research Report
  • [Presentation] 細胞核と染色体構造の動態:核内空間配置に関する分子基盤について2011

    • Author(s)
      田辺秀之
    • Organizer
      第5回日本エピジェネティクス研究会年会
    • Place of Presentation
      KKRホテル熊本(招待講演)
    • Year and Date
      2011-05-19
    • Related Report
      2011 Annual Research Report
  • [Presentation] Chromosome kissing due to 3D-repositioning of chromosome territories leading to primatekaryotypic evolution2011

    • Author(s)
      Hideyuki Tanabe, Takafumi Ishida, Hirohisa Hirai
    • Organizer
      The 63rd Annual Meeting of the Japan Society for Cell Biology
    • Place of Presentation
      Hokkaido University Clark Memorial Student Center
    • Related Report
      2011 Final Research Report
  • [Presentation] Chromosome kissing due to 3D-repositioning of chromosome territories leading to primate karyotypic evolution2011

    • Author(s)
      Hideyuki Tanabe, Takafumi Ishida, Hirohisa Hirai
    • Organizer
      The 63^<rd> Annual Meeting of the Japan Society for Cell Biology
    • Place of Presentation
      Hokkaido University Clark Memorial Student Center
    • Related Report
      2011 Annual Research Report
  • [Presentation] 3D-repositioning of chromosome territories leading to primate karyotypic evolution2010

    • Author(s)
      Hideyuki Tanabe
    • Organizer
      International Primatological Society XXIII Congress Kyoto 2010
    • Place of Presentation
      Kyoto University Clock Tower Centennial Hall
    • Year and Date
      2010-09-16
    • Related Report
      2011 Final Research Report
  • [Presentation] 3D-repositioning of chromosome territories leading to primate karyotypic evolution2010

    • Author(s)
      Hideyuki Tanabe
    • Organizer
      International Primatological Society XXIII Congress Kyoto 2010
    • Place of Presentation
      京都大学 吉田キャンパス
    • Year and Date
      2010-09-16
    • Related Report
      2010 Annual Research Report
  • [Presentation] Kissing of chromosome territories leading to chromosomal translocation and genomic evolution2009

    • Author(s)
      Hideyuki Tanabe
    • Organizer
      第32回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2009-12-10
    • Related Report
      2011 Final Research Report 2009 Annual Research Report
  • [Presentation] 核内染色体テリトリーの放射状核内配置の特性について、(財)染色体学会2009

    • Author(s)
      田辺秀之
    • Organizer
      第60回年会
    • Place of Presentation
      くにびきメッセ(島根県松江市)
    • Year and Date
      2009-11-12
    • Related Report
      2011 Final Research Report
  • [Presentation] 核内染色体テリトリーの放射状核内配置の特性について2009

    • Author(s)
      田辺秀之
    • Organizer
      (財)染色体学会 第60回年会
    • Place of Presentation
      くにびきメッセ(島根県松江市)
    • Year and Date
      2009-11-12
    • Related Report
      2009 Annual Research Report
  • [Remarks]

    • URL

      http://www.esb.soken.ac.jp/

    • Related Report
      2011 Final Research Report
  • [Remarks]

    • URL

      http://www.esb.soken.ac.jp/

    • Related Report
      2011 Annual Research Report
  • [Remarks]

    • URL

      http://www.esb.soken.ac-jp/

    • Related Report
      2010 Annual Research Report
  • [Remarks]

    • URL

      http://www.esb.soken.ac.jp/

    • Related Report
      2009 Annual Research Report

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Published: 2009-04-01   Modified: 2016-04-21  

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