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The molecular mechanism of cellular genescence

Research Project

Project/Area Number 21689010
Research Category

Grant-in-Aid for Young Scientists (A)

Allocation TypeSingle-year Grants
Research Field General medical chemistry
Research InstitutionNagoya City University

Principal Investigator

SHIMADA Midori  Nagoya City University, 大学院・医学研究科, 講師 (60444981)

Project Period (FY) 2009 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥28,080,000 (Direct Cost: ¥21,600,000、Indirect Cost: ¥6,480,000)
Fiscal Year 2010: ¥12,350,000 (Direct Cost: ¥9,500,000、Indirect Cost: ¥2,850,000)
Fiscal Year 2009: ¥15,730,000 (Direct Cost: ¥12,100,000、Indirect Cost: ¥3,630,000)
Keywords細胞周期 / DNA損傷 / チェックポイント / クロマチン
Research Abstract

Transcriptional repression of E2F1 target genes is regulated by rapid reduction of histone H3-T11 phosphorylation, which is mediated at least in part by DNA damage induced Chk1 dissociation from chromatin. However, molecular mechanism(s) how this dephosphorylation triggers transcriptional repression remains elusive. Here, we identify an 'acetyl/phospho' cassette at H3-K9/T11 on E2F promoters, which is switched by replacement of Chk1-GCN5 complexes with protein phosphatase 1 (PP1)-HDACs complexes scaffolded on Rb-family pocket proteins. PP1 activity toward T11 dephosphorylation is regulated by Cdk1-dependent phosphorylation of PP1 at T311. Under unperturbed condition, Chk1/GCN5 complex existed on E2F1 promoters. After DNA damage, PP1/HADCs complex on pRb was recruited to E2F1. Our results thus suggest that T11 phosphorylation may function as a phospho-acceptor targeted by ATR-Chk1 axis and accelerate K9 acetylation, which is reversed by the activation of PP1 and recruitment of HDACs bound to Rb-related proteins by Chk1-dependent inhibition of Cdks after DNA damage.

Report

(3 results)
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report
  • Research Products

    (21 results)

All 2010 2009 Other

All Journal Article (15 results) (of which Peer Reviewed: 15 results) Presentation (3 results) Book (2 results) Remarks (1 results)

  • [Journal Article] PP1γ is a phosphatase responsible for dephosphorylation of histone H3 at threonine 11 after DNA damage.2010

    • Author(s)
      Shimada M, Haruta M, Niida H, Sawamoto K, Nakanishi M.
    • Journal Title

      EMBO Rep. 11

      Pages: 883-889

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Cooperative functions of Chk1 and Chk2 reduce tumor susceptibility in vivo.2010

    • Author(s)
      Niida H, Murata K, Shimada M, Ogawa K, Ohta K, Suzuki K, Fujigaki H, Khaw AK, Banerjee B, Hande P, Miyamoto T, Miyoshi I, Shirai T, Motoyama N, Delhase M, Appella E, Nakanishi M.
    • Journal Title

      EMBO J. 29

      Pages: 3558-3570

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Mechanisms of dNTP supply that play an essential role in maintaining genome integrity in eukaryotic cells2010

    • Author(s)
      Niida H, Shimada M, Murakami H, Nakanishi M.
    • Journal Title

      Cancer Sci. 101

      Pages: 2505-2509

    • NAID

      10027834110

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Essential role of Tip60-dependent recruitment of ribonucleotide reductase at DNA damage sites in DNA repair during G1 phase.2010

    • Author(s)
      Niida H, Katsuno Y, Sengoku M, Shimada M, Yukawa M, Ikura M, Ikura T, Kohno K, Shima H, Suzuki H, Tashiro S, Nakanishi M.
    • Journal Title

      Genes and Dev. 24

      Pages: 333-338

    • NAID

      130007000033

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Regulation of origin firing program in mammals through Chk1-cyclin A/Cdk1 axis.2010

    • Author(s)
      Nakanishi M, Katsuno Y, Niida H, Murakami H, Shimada M.
    • Journal Title

      Chromosomal Res. 18

      Pages: 103-113

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] PP1γ is a phosphatase responsible for dephosphorylation of histone H3 at threonine 11 after DNA damage.2010

    • Author(s)
      Shimada M, et al
    • Journal Title

      EMBO Rep.

      Volume: 11 Pages: 883-889

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Cooperative functions of Chk1 and Chk2 reduce tumor susceptibility in vivo2010

    • Author(s)
      Niida H, et al
    • Journal Title

      EMBO J.

      Volume: 29 Pages: 3558-3570

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Mechanisms of dNTP supply that play an essential role in maintaining genome integrity in eukaryotic cells2010

    • Author(s)
      Niida H, et al
    • Journal Title

      Cancer Sci.

      Volume: 101 Pages: 2505-2509

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Chkl-cyclin A/Cdkl axis regulates origin firing programs in mammals2010

    • Author(s)
      Nakanishi M, et al
    • Journal Title

      Chromosome Research. 18

      Pages: 103-113

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] DNA damage responses in skin biology-Implications in tumor prevention and aging acceleration.2009

    • Author(s)
      Nakanishi M, Niida H, Murakami H, Shimada M.
    • Journal Title

      J Dermatol Sci.2009 56

      Pages: 76-81

    • NAID

      10025560903

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Casein kinase II is required for the spindle assembly checkpoint by regulating Mad2p in fission yeast.2009

    • Author(s)
      Shimada M, Yamamoto A, Murakami-Tonami Y, Nakanishi M, Yoshida T, Aiba H, Murakami H.
    • Journal Title

      Biochem Biophys Res Commun. 388

      Pages: 529-532

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Cyclin A-Cdk1 regulates the origin firing program in mammalian cells.2009

    • Author(s)
      Katsuno Y, Suzuki A, Sugimura K, Okumura K, Zineldeen DH, Shimada M, Niida H, Mizuno T, Hanaoka F, Nakanishi M.
    • Journal Title

      Proc.Natl.Acad.Sci.U.S.A. 106

      Pages: 3184-3189

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Ptpcd-1 is a novel cell cycle related phosphatase that regulates centriole duplication and cytokinesis.2009

    • Author(s)
      Zineldeen DH, Shimada M, Niida H, Katsuno Y, Nakanishi M.
    • Journal Title

      Biochem.Biophys.Res.Commun. 380

      Pages: 460-466

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Casein kinase II is required for the spindle assembly checkpoint by regulating Mad2p in fission yeast2009

    • Author(s)
      Shimada M, et al
    • Journal Title

      Biochemical and Biophysical Research Communications 388

      Pages: 529-532

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] DNA damage responses in skin biology ; implications in tumor prevention and aging acceleration.2009

    • Author(s)
      Nakanishi M, et al
    • Journal Title

      Journal of dermatological science 56

      Pages: 76-81

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Presentation] Histone binary switch mediated by Chk1-HAT and PP1-HDAC regulates DNA damage induced transcriptional repression2010

    • Author(s)
      Shimada M
    • Organizer
      The 20^<th> Hot Spring Harbor Symposium in Japan
    • Place of Presentation
      Fukuoka
    • Year and Date
      2010-08-20
    • Related Report
      2010 Final Research Report
  • [Presentation] Histone binary switch mediated by Chk1-HAT and PP1-HDAC regulates DNA damage induced transcriptional repression2010

    • Author(s)
      Midori Shimada
    • Organizer
      The 20^<th> Hot Spring Harbor Symposium in Japan
    • Place of Presentation
      福岡(The Luigans Spa&Resort)
    • Year and Date
      2010-08-20
    • Related Report
      2010 Annual Research Report
  • [Presentation] Histone binary switch mediated by Chkl-HAT and PPl-HDAC regulates DNA damage-induced transcriptional repression2009

    • Author(s)
      Midori Shimada
    • Organizer
      4th international workshop on cell regulation in division and arrest
    • Place of Presentation
      沖縄
    • Year and Date
      2009-12-02
    • Related Report
      2009 Annual Research Report
  • [Book] 細胞老化とチェックポイント(細胞周期フロンティア)2010

    • Author(s)
      島田緑、中西真
    • Publisher
      共立出版
    • Related Report
      2010 Final Research Report
  • [Book] 細胞周期フロンティア(細胞老化とチェックポイント)2010

    • Author(s)
      島田緑、中西真
    • Publisher
      共立出版
    • Related Report
      2010 Annual Research Report
  • [Remarks] ホームページ等

    • URL

      http://www.med.nagoya-cu.ac.jp/w3med/research/reports/results/001.html

    • Related Report
      2010 Final Research Report

URL: 

Published: 2009-04-01   Modified: 2016-04-21  

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