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Mechanical control of the Brownian process for bio nano-motors

Research Project

Project/Area Number 21710120
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field Nanomaterials/Nanobioscience
Research InstitutionOsaka University

Principal Investigator

IWAKI Mitsuhiro  Osaka University, 医学系研究科, 助教 (30432503)

Project Period (FY) 2009 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2010: ¥780,000 (Direct Cost: ¥600,000、Indirect Cost: ¥180,000)
Fiscal Year 2009: ¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Keywords1分子生理 / 生化学 / 生体ナノモーター / ミオシン / 1分子計測 / 1分子操作 / レーザートラップ / 確率共鳴
Research Abstract

I constructed the dark-field microscopy combined with an optical trap for the single molecule measurements. Using this apparatus, I succeeded in both direct observation of Brownian search process in the stepping motion of bio nano-motor, myosin-V and mechanical control of the process. Dwell time analysis, noise analysis for the Brownian process and the load dependency enabled us to model bio nano-motor from a viewpoint of the roll of thermal noise in mechanical function. This is an important result toward control of nano-machine using noise such as stochastic resonance.

Report

(3 results)
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report
  • Research Products

    (51 results)

All 2011 2010 2009 Other

All Journal Article (4 results) (of which Peer Reviewed: 4 results) Presentation (40 results) Book (4 results) Remarks (3 results)

  • [Journal Article] Entropic potential field formed for a linear-motor protein near a filament : Statistical-mechanical analyses using simple models2010

    • Author(s)
      K.Amano, T.Yoshidome, M.Iwaki, M.Suzuki, M.Kinoshita
    • Journal Title

      Journal of Chemical Physics Vol.133

    • NAID

      120002511239

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Entropic potential field formed for a linear-motor protein near a filament : Statistical-mechanical analyses using simple models2010

    • Author(s)
      K.Amano, T.Yoshidome, M.Iwaki, M.Suzuki, M.Kinoshita
    • Journal Title

      Journal of Chemical Physics

      Volume: 133

    • NAID

      120002511239

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Brownian search-and-catch mechanism for myosin-VI steps2009

    • Author(s)
      M.Iwaki, A.Iwane, T.Shimokawa, R.Cooke, T.Yanagida
    • Journal Title

      Nature Chemical Biology Vol.5

      Pages: 403-405

    • NAID

      10025976295

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Brownian search-and-catch mechanism for myosin-VI steps Nature Chemical Biology2009

    • Author(s)
      M.Iwaki, A.Iwane, T.Shimokawa, R.Cooke, T.Yanagida
    • Journal Title

      Nature Chemical Biology 5

      Pages: 403-405

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Presentation] Observation and control of mechanical process in skeletal myosin steps2011

    • Author(s)
      M.Iwaki
    • Organizer
      Workshop on Hydration and ATP energy 2011
    • Place of Presentation
      仙台
    • Year and Date
      2011-03-16
    • Related Report
      2010 Final Research Report
  • [Presentation] Co-solvent effect on actomyosin motility revealed by single molecule measurements2011

    • Author(s)
      M.Iwaki
    • Organizer
      Workshop on "Hydration and ATP energy" 2011
    • Place of Presentation
      Akiu-Sendai
    • Year and Date
      2011-03-16
    • Related Report
      2010 Annual Research Report
  • [Presentation] Observation and control of mechanical process in skeletal myosin steps2011

    • Author(s)
      M.Iwaki, A.Iwane, T.Yangida
    • Organizer
      Workshop on "Hydration and ATP energy" 2011
    • Place of Presentation
      Akiu-Sendai
    • Year and Date
      2011-03-16
    • Related Report
      2010 Annual Research Report
  • [Presentation] Structural dynamics and Brownian search-and-catch of Myosin V2011

    • Author(s)
      K.Fujita, A.Iwane, T.Yanagida, M.Iwaki
    • Organizer
      Workshop on "Hydration and ATP energy" 2011
    • Place of Presentation
      Akiu-Sendai
    • Year and Date
      2011-03-16
    • Related Report
      2010 Annual Research Report
  • [Presentation] Observation of mechanical process for myosin-II by a dark-field microscopy combined with an optical trap2011

    • Author(s)
      M.Iwaki
    • Organizer
      Biophysical Society 55<th> Annual meeting
    • Place of Presentation
      Baltimore, Maryland
    • Year and Date
      2011-03-05
    • Related Report
      2010 Final Research Report
  • [Presentation] Brownian search-and-catch mechanism for myosin-VI steps2011

    • Author(s)
      M.Iwaki
    • Organizer
      Gordon research conferences -Stochastic physics in biology-
    • Place of Presentation
      Baltimore, Maryland
    • Related Report
      2010 Final Research Report
  • [Presentation] ミオシンVの歩行中におけるレバーアームの揺らぎ2011

    • Author(s)
      藤田恵介、岩城光宏、岩根敦子、柳田敏雄
    • Organizer
      生体運動研究合同班会議プログラム
    • Place of Presentation
      大阪市立大学・杉本キャンパス
    • Related Report
      2010 Annual Research Report
  • [Presentation] Brownian search-and-catch mechanism for myosin-VI steps2011

    • Author(s)
      M.Iwaki, A.H.Iwane, T.Shimokawa, R.Cooke, T.Yanagida
    • Organizer
      Gordon Research Confereces-Stochastic Physics in Biology-
    • Place of Presentation
      Ventura, CA (USA)
    • Related Report
      2010 Annual Research Report
  • [Presentation] Arabidpsis thaliana Myosin XI is a processive motor with a broad stepsize2011

    • Author(s)
      T.Morikawa, K.Ito, A.Kimura, K.Ikezaki, T.Komori, K.Fujita, M.Iwaki, T.Yanagida
    • Organizer
      Biophysical Society 55^<th> Annual Meeting
    • Place of Presentation
      Baltimore, Maryland (USA)
    • Related Report
      2010 Annual Research Report
  • [Presentation] Visualizing and clarifying the mechanical properties of the Myosin V Brownian search with optical tweezers2011

    • Author(s)
      K.Fujita, M.Iwaki, A.H.Iwane, T.Yanagida
    • Organizer
      Biophysical Society 55^<th> Annual Meeting
    • Place of Presentation
      Baltimore, Maryland (USA)
    • Related Report
      2010 Annual Research Report
  • [Presentation] Observation of mechanical process for myosin-II by a dark-field microscopy combined with an optical trap2011

    • Author(s)
      M.Iwaki, A.Iwane, T.Yanagida
    • Organizer
      Biophysical Society 55^<th> Annual Meeting
    • Place of Presentation
      Baltimore, Maryland (USA)
    • Related Report
      2010 Annual Research Report
  • [Presentation] Brownian search-and-catch mechanism for actomyosin2010

    • Author(s)
      M.Iwaki
    • Organizer
      International symposium on single molecule nano detection and its application to life science
    • Place of Presentation
      淡路夢舞台国際会議センター
    • Year and Date
      2010-04-17
    • Related Report
      2010 Final Research Report
  • [Presentation] Brownian search-and-catch mechanism for actomyosin2010

    • Author(s)
      Mitsuhiro Iwaki
    • Organizer
      International Symposium on Single molecule Nano Detection and Its Application to Life Science
    • Place of Presentation
      Awaji Yumebutai International conference center(招待講演)
    • Year and Date
      2010-04-17
    • Related Report
      2010 Annual Research Report
  • [Presentation] Visualizing and clarifying the mechanical properties of the myosin V Brownian search with optical tweezers2010

    • Author(s)
      M.Iwaki
    • Organizer
      RIKEN QBiC Kick-off meeting
    • Place of Presentation
      OLABB, Osaka
    • Related Report
      2010 Final Research Report
  • [Presentation] Observation of mechanical process for myosin-II by a dark-field microscopy combined with an optical trap2010

    • Author(s)
      M.Iwaki
    • Organizer
      第48回日本生物物理学会年会
    • Place of Presentation
      東北大学
    • Related Report
      2010 Final Research Report
  • [Presentation] Brownian search-and-catch mechanism for myosin-VI steps2010

    • Author(s)
      M.Iwaki
    • Organizer
      Biophysical society 54th annual meeting
    • Place of Presentation
      San Francisco
    • Related Report
      2010 Final Research Report
  • [Presentation] Observation of mechanical process for myosin II by a dark-field microscopy combined with an optical trap2010

    • Author(s)
      M.Iwaki, A.H.Iwane, T.Yanagida
    • Organizer
      第48回日本生物物理学会年会
    • Place of Presentation
      東北大学川内キャンパス
    • Related Report
      2010 Annual Research Report
  • [Presentation] Visualizing and clarifying the mechanical properties of the Myosin V Brownian search with optical tweezers2010

    • Author(s)
      K.Fujita, M.Iwaki, A.H.Iwane, T.Yanagida
    • Organizer
      第48回日本生物物理学会年会
    • Place of Presentation
      東北大学川内キャンパス
    • Related Report
      2010 Annual Research Report
  • [Presentation] Observation of mechanical process for myosin II by a dark-field microscopy combined with an optical trap2010

    • Author(s)
      M.Iwaki, A.H.Iwane, T.Yanagida
    • Organizer
      RIKEN Quantitative Biology Center (QBiC) Kick-off meeting
    • Place of Presentation
      Conference room (3rd floor), OLABB, Osaka
    • Related Report
      2010 Annual Research Report
  • [Presentation] Visualizing and clarifying the mechanical properties of the Myosin V Brownian search with optical tweezers2010

    • Author(s)
      M.Iwaki, A.H.Iwane, T.Yanagida
    • Organizer
      RIKEN Quantitative Biology Center (QBiC) Kick-off meeting
    • Place of Presentation
      Conference room (3rd floor), OLABB, Osaka
    • Related Report
      2010 Annual Research Report
  • [Presentation] ブラウニアンサーチ中のミオシンVモータードメインに対する負荷が歩行運動に及ぼす影響2010

    • Author(s)
      K.Fujita, M.Iwaki, A.Iwane, T.Yanagida
    • Organizer
      2010年生体運動研究合同班会議
    • Place of Presentation
      中央大学理工学部・大講義室
    • Related Report
      2009 Annual Research Report
  • [Presentation] Brownian search-and-catch mechanism for myosin-VI steps2010

    • Author(s)
      M.Iwaki, A.Iwane, T.Shimokawa, R.Cooke, T.Yanagida
    • Organizer
      Biophysical Society 54^<th> Annual Meeting
    • Place of Presentation
      Moscone Center, San Francisco, California, USA
    • Related Report
      2009 Annual Research Report
  • [Presentation] The mechanical properties of a single myosin V motor domain during gait motion2010

    • Author(s)
      K.Fujita, M.Iwaki, A.Iwane, T.Yanagida
    • Organizer
      Biophysical Society 54^<th> Annual Meeting
    • Place of Presentation
      Moscone Center, San Francisco, California, USA
    • Related Report
      2009 Annual Research Report
  • [Presentation] Micro-mechanical model of muscle contraction2010

    • Author(s)
      L.Marcucci, T.Shimokawa, M.Iwaki, T.Yanagida
    • Organizer
      Biophysical Society 54^<th> Annual Meeting
    • Place of Presentation
      Moscone Center, San Francisco, California, USA
    • Related Report
      2009 Annual Research Report
  • [Presentation] Effect of cosolvent on Brownian search-and-catch mechanism for actomyosin2010

    • Author(s)
      Mitsuhiro Iwaki
    • Organizer
      新学術領域研究国際公開シンポジウム
    • Place of Presentation
      仙台秋保岩沼屋
    • Related Report
      2009 Annual Research Report
  • [Presentation] Brownian-search-and-catch mechanism for myosin-VI steps2010

    • Author(s)
      M.Iwaki, A.Iwane, T.Shimokawa, R.Cooke, T.Yanagida
    • Organizer
      新学術領域研究国際公開シンポジウム
    • Place of Presentation
      仙台秋保岩沼屋
    • Related Report
      2009 Annual Research Report
  • [Presentation] The mechanical properties of a single myosin V motor domain during gait motion.2010

    • Author(s)
      K.Fujita, M.Iwaki, A.Iwane, T.Yanagida
    • Organizer
      新学術領域研究国際公開シンポジウム
    • Place of Presentation
      仙台秋保岩沼屋
    • Related Report
      2009 Annual Research Report
  • [Presentation] 共溶媒の効果:ATP駆動モーター蛋白質の1分子計測の場合2010

    • Author(s)
      岩城光宏
    • Organizer
      日本物理学会第65回年次大会
    • Place of Presentation
      岡山大学津島キャンパス
    • Related Report
      2009 Annual Research Report
  • [Presentation] ミオシンVIのストレインセンサーの定量解析2009

    • Author(s)
      岩城光宏
    • Organizer
      第47回日本生物物理学会年会
    • Place of Presentation
      徳島文理大学
    • Year and Date
      2009-10-29
    • Related Report
      2010 Final Research Report
  • [Presentation] ナノ粒子を利用したモーター蛋白質の高速1分子ナノイメージングと操作2009

    • Author(s)
      岩城光宏
    • Organizer
      第82回日本生化学会大会
    • Place of Presentation
      神戸ポートアイランド
    • Year and Date
      2009-10-21
    • Related Report
      2010 Final Research Report 2009 Annual Research Report
  • [Presentation] 共通手法としてのCosolventの利用2009

    • Author(s)
      岩城光宏
    • Organizer
      「水を主役としたATPエネルギー変換」第1回全体会議
    • Place of Presentation
      大阪ガーデンパレス
    • Year and Date
      2009-09-10
    • Related Report
      2009 Annual Research Report
  • [Presentation] ATP駆動タンパク質の化学力学変換機構の1分子解析2009

    • Author(s)
      岩城光宏、柳田敏雄
    • Organizer
      「水を主役としたATPエネルギー変換」第1回全体会議
    • Place of Presentation
      大阪ガーデンパレス
    • Year and Date
      2009-09-09
    • Related Report
      2009 Annual Research Report
  • [Presentation] Brownian search-and-catch mechanism for myosin VI steps2009

    • Author(s)
      M.Iwaki
    • Organizer
      Watching biomolecules in action symposium
    • Place of Presentation
      千里ライフサイエンスセンター
    • Related Report
      2010 Final Research Report
  • [Presentation] Micro-mechanicalmodelofmusclecontraction2009

    • Author(s)
      L.Marcucci, T.Shimokawa, M.Iwaki, T.Yanagida
    • Organizer
      International Workshop on Single molecule spectroscopy and ultra sensitive analysis in the life sciences
    • Place of Presentation
      Berlin, Berlin-Adlershof, Germany
    • Related Report
      2009 Annual Research Report
  • [Presentation] 1分子モーター機能への水物性の影響2009

    • Author(s)
      岩城光宏
    • Organizer
      新学術領域内研究交流会
    • Place of Presentation
      清明荘・仙台
    • Related Report
      2009 Annual Research Report
  • [Presentation] ミオシンVIのストレインセンサーの定量解析2009

    • Author(s)
      岩城光宏、岩根敦子、下川哲也、柳田敏雄
    • Organizer
      第47回日本生物物理学会年会
    • Place of Presentation
      徳島文理大学 徳島キャンパス・アスティとくしま
    • Related Report
      2009 Annual Research Report
  • [Presentation] 歩行運動中のミオシンVのモータードメイン1個の力学特性2009

    • Author(s)
      藤田恵介、岩城光宏、岩根敦子、森松賢順、柳田敏雄
    • Organizer
      第47回日本生物物理学会年会
    • Place of Presentation
      徳島文理大学 徳島キャンパス・アスティとくしま
    • Related Report
      2009 Annual Research Report
  • [Presentation] Brownian motor in muscle mechanics2009

    • Author(s)
      L.Marcucci, T.Shimokawa, M.Iwaki, T.Yanagida
    • Organizer
      第47回日本生物物理学会年会
    • Place of Presentation
      徳島文理大学 徳島キャンパス・アスティとくしま
    • Related Report
      2009 Annual Research Report
  • [Presentation] ダプルトラップ系を用いたミオシンIIのアクチンとの負荷依存的な結合の観察2009

    • Author(s)
      欄智久、岩城光宏、小森智貴、柳田敏雄
    • Organizer
      第47回日本生物物理学会年会
    • Place of Presentation
      徳島文理大学 徳島キャンパス・アスティとくしま
    • Related Report
      2009 Annual Research Report
  • [Presentation] Brownian search-and-catch mechanism for myosin-VI steps2009

    • Author(s)
      M.Iwaki, T.Shimokawa, A.Iwane, T.Yanagida
    • Organizer
      Watching Biomolecules in Action Symposium & 2nd Kanazawa Bio-AFM Workshop
    • Place of Presentation
      Senri Lifescience Center, Osaka
    • Related Report
      2009 Annual Research Report
  • [Book] Annual Report of Osaka University-Academic Achievement-2009-20102011

    • Author(s)
      Mitsuhiro Iwaki(共著)
    • Publisher
      大阪大学出版会
    • Related Report
      2010 Annual Research Report
  • [Book] 生物物理:ストレインセンサーが制御するミオシンVIのブラウン運動整流機構2010

    • Author(s)
      岩城光宏
    • Publisher
      日本生物物理学会
    • Related Report
      2010 Final Research Report
  • [Book] Annual Report of Osaka University. Academic Achievement-2009-20102010

    • Author(s)
      Mitsuhiro Iwaki
    • Total Pages
      1
    • Publisher
      大阪大学出版会
    • Related Report
      2010 Final Research Report
  • [Book] 生物物理288号「ストレインセンサーが制御するミオシンVIのブラウン運動整流機構」2010

    • Author(s)
      岩城光宏
    • Total Pages
      2
    • Publisher
      日本生物物理学会
    • Related Report
      2009 Annual Research Report
  • [Remarks] 岩城光宏、日本経済新聞「筋肉を収縮させる力分子センサーが制御」2009年5月

    • Related Report
      2010 Final Research Report
  • [Remarks] 大阪大学医学系研究科主要研究成果

    • URL

      http://www.med.osaka-u.ac.ip/jp/seika/index.html

    • Related Report
      2009 Annual Research Report
  • [Remarks] 大阪大学生命機能研究科研究成果

    • URL

      http://www.fbs.osaka-u.ac.jp/jp/events/achievement/brownian-search-and-catch-mechanism-for-myosin-vi-stepsvi/

    • Related Report
      2009 Annual Research Report

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Published: 2009-04-01   Modified: 2016-04-21  

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