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Conformational dynamics measurement of EGFR by high-speed single-molecule FRET measurement

Research Project

Project/Area Number 21710122
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field Nanomaterials/Nanobioscience
Research InstitutionThe Institute of Physical and Chemical Research

Principal Investigator

OKAMOTO Kenji  The Institute of Physical and Chemical Research, 佐甲細胞情報研究室, 研究員 (40402763)

Research Collaborator HIBINO Kayo  独立行政法人理化学研究所, 佐甲細胞情報研究室, 研究員 (40435673)
Project Period (FY) 2009 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥4,550,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥1,050,000)
Fiscal Year 2010: ¥2,600,000 (Direct Cost: ¥2,000,000、Indirect Cost: ¥600,000)
Fiscal Year 2009: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
KeywordsEGFR / 単一分子計測 / FRET / 統計的データ解析 / 高時間分解計測 / 分子構造変化ダイナミクス
Research Abstract

Single molecule FRET measurement on conformational dynamics of the EGFR molecule, which is related to signal transduction on the cell membrane, has been developed. Conditions for preparation and fluorescence labeling of EGFR were optimized and FRET signals were successfully observed while the dynamics measurements could have not been completed since it had been taken longer time to optimize EGFR expression conditions than initial expectation. A new method of experimental data analysis based on the variational Bayes was also developed, which improved the accuracy and the time resolution.

Report

(3 results)
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report
  • Research Products

    (4 results)

All 2010 2009

All Presentation (4 results)

  • [Presentation] Holliday Junctionの自発的Branch Migrationのタイムスタンプ1分子FRET計測2010

    • Author(s)
      岡本憲二、佐甲靖志
    • Organizer
      日本生物物理学会第48回年会
    • Place of Presentation
      仙台
    • Year and Date
      2010-09-21
    • Related Report
      2010 Final Research Report
  • [Presentation] Single-molecule time-stamped FRET measurement of the spontaneous branch migration of the Holliday junction2010

    • Author(s)
      岡本憲二、佐甲靖志
    • Organizer
      第48回日本生物物理学会年会
    • Place of Presentation
      東北大学(仙台市)
    • Year and Date
      2010-09-21
    • Related Report
      2010 Annual Research Report
  • [Presentation] 単一分子ダイナミクスの実時間観察を可能にする2チャンネル同時タイムスタンプ計測2009

    • Author(s)
      岡本憲二、佐甲靖志
    • Organizer
      日本生物物理学会第47回年会
    • Place of Presentation
      徳島
    • Year and Date
      2009-11-01
    • Related Report
      2010 Final Research Report
  • [Presentation] 単一分子ダイナミクスの実時間観察を可能にする2チャンネル同時タイムスタンプ計測2009

    • Author(s)
      岡本憲二、佐甲靖志
    • Organizer
      第47回日本生物物理学会年会
    • Place of Presentation
      アスティ徳島(徳島市)
    • Year and Date
      2009-11-01
    • Related Report
      2009 Annual Research Report

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Published: 2009-04-01   Modified: 2016-04-21  

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