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Neuron-specific impairment of inter-chromosomal pairing and transcription in a novel model of human 15q-duplication syndrome

Research Project

Project/Area Number 21710193
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field 基礎ゲノム科学
Research InstitutionKanazawa University

Principal Investigator

HORIKE Shinichi  Kanazawa University, フロンティアサイエンス機構, 特任助教 (40448311)

Project Period (FY) 2009 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥4,550,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥1,050,000)
Fiscal Year 2010: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Fiscal Year 2009: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Keywords自閉症 / 染色体工学 / エピジェネティクス / 15q11-q13 / インプリンティング / ゲノム / 遺伝子 / 発現制御 / 染色体 / クロマチン
Research Abstract

The most common recurrent cytogenetic abnormalities in autism spectrum disorders involve maternally derived duplications of the imprinted domain on chromosome 15q11-q13. Therefore characterizing the epigenetic chromatin organization of 15q11-q13 is important for understanding normal neuronal development. In this study, we focused on the homologous 15q11-q13 pairing in human neuronal cells. Our aim is to understand how the homologous pairing of 15q11-q13 is organized in the mammalian brain and associated with gene expression within the paired regions. In order to model 15q11-q13 maternal duplication in a neuronal cell line, a maternal copy of human chromosome 15 was transferred into the human SH-SY5Y neuronal cells by microcell fusion. As expected, homologous 15q11-q13 pairing was disrupted in human neuronal cells with an extra maternal copy of human chromosome 15. Interestingly, gene expression analysis of 15q11-q13 transcripts demonstrated significantly decreased expression of SNRPN, GABRB3, CHRNA7 transcripts despite increased maternal dosage. These results suggested that gene expression can be altered in unexpected ways through epigenetic changes resulting from increased maternal 15q11-13 dosage.

Report

(3 results)
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report
  • Research Products

    (28 results)

All 2011 2010 2009

All Journal Article (5 results) (of which Peer Reviewed: 3 results) Presentation (23 results)

  • [Journal Article] Aberrant CpG Methylation of the Imprinting Control Region KvDMR1 Detected in Assisted Reproductive Technology-Produced Calves and Pathogenesis of Large Offspring Syndrome.2010

    • Author(s)
      Hori.N
    • Journal Title

      Animal Reproduction Science

      Volume: 122 Pages: 303-312

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Localization of an hTERT repressor region on human chromosome 3p 21.3 using chromosome engineering.2010

    • Author(s)
      Abe.S
    • Journal Title

      Genome Integrity

      Volume: 1 Pages: 6-6

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 自閉症分子マーカー探索~自閉症の遺伝子・分子生物・実験動物学的研究2009

    • Author(s)
      東田陽博, 堀家慎一, 小泉恵太, 吉原亨
    • Journal Title

      医学のあゆみ 231

      Pages: 1072-1078

    • Related Report
      2010 Final Research Report
  • [Journal Article] Russell-Silver-like Syndromes : Complex epigenetic abnormalities are notdetected by targeted methylation analysis.2009

    • Author(s)
      Horike.S
    • Journal Title

      American Journal of Medical Genetics 149A

      Pages: 2415-2423

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 自閉症分子マーカー探索 -自閉症の遺伝子・分子生物・実験動物学的研究2009

    • Author(s)
      東田陽博, 堀家慎一
    • Journal Title

      医学のあゆみ 231

      Pages: 1072-1078

    • Related Report
      2009 Annual Research Report
  • [Presentation] MeCP2-and CTCF-mediated homologous 15q11-q13 pairing is essential for neuronal gene expressions.2011

    • Author(s)
      Horike S.
    • Organizer
      Keystone symposia
    • Place of Presentation
      Grove Park Inn Resort & Spa, (USA)
    • Year and Date
      2011-03-28
    • Related Report
      2010 Final Research Report
  • [Presentation] MeCP2-and CTCF-mediated homologous 15q11-q13 pairing is essential for neuronal gene expressions.2011

    • Author(s)
      堀家慎一
    • Organizer
      Keystone symposia, Environmental Epigenomics and Disease Susceptibility
    • Place of Presentation
      Grove Park Inn Resort & Spa(USA)
    • Year and Date
      2011-03-28
    • Related Report
      2010 Annual Research Report
  • [Presentation] Homologous pairing of chromosome 15q11-q13 is associated with significant disruption of gene expression in human maternal chromosome 15 microcell transferred neurons.2010

    • Author(s)
      堀家慎一
    • Organizer
      日本人類遺伝学会第55回大会
    • Place of Presentation
      大宮ソニックシティー(埼玉県)
    • Year and Date
      2010-11-22
    • Related Report
      2010 Annual Research Report 2010 Final Research Report
  • [Presentation] Acquisition of a germline methylation imprint at the SNRPN DMR.2010

    • Author(s)
      堀家慎一
    • Organizer
      International Symposium on Epigenome Network, Development and Reprogramming of Germ Cells
    • Place of Presentation
      九州大学医学部百年講堂(福岡県)
    • Year and Date
      2010-11-22
    • Related Report
      2010 Annual Research Report
  • [Presentation] Homologous pairing of chromosome 15q11-q13 is associated with significant disruption of gene expression in human maternal chromosome 15 microcell transferred neurons.2010

    • Author(s)
      堀家慎一
    • Organizer
      A Brain Research Meeting ; The Emerging Neuroscience of Autism Spectrum Disorders
    • Place of Presentation
      Westin San Diego(USA)
    • Year and Date
      2010-11-11
    • Related Report
      2010 Annual Research Report
  • [Presentation] Homologous pairing of chromosome 15q11-q13 is associated with significant disruption of gene expression in human maternal chromosome 15 microcell transferred neurons.2010

    • Author(s)
      堀家慎一
    • Organizer
      60^<th> Annual Meeting ; The American Society of Human Genetics
    • Place of Presentation
      Washington Convention Center(USA)
    • Year and Date
      2010-11-06
    • Related Report
      2010 Annual Research Report
  • [Presentation] Homologous pairing of chromosome 15q11-q13 is associated with significant disruption of gene expression in human maternal chromosome 15 microcell transferred neurons.2010

    • Author(s)
      堀家慎一
    • Organizer
      Epigenetics Europe
    • Place of Presentation
      The Burlington Hotel(Ireland)
    • Year and Date
      2010-09-14
    • Related Report
      2010 Annual Research Report
  • [Presentation] Homologous pairing of chromosome 15q11-q13 is associated with significant disruption of gene expression in human maternal chromosome 15 microcell transferred neurons.2010

    • Author(s)
      堀家慎一
    • Organizer
      Wellcome Trust Scientific Conferences ; Signalling to Chromatin
    • Place of Presentation
      Wellcome Trust Genome Campus (UK)
    • Year and Date
      2010-09-08
    • Related Report
      2010 Annual Research Report
  • [Presentation] Homologous pairing of chromosome 15q11-q13 is associated with significant disruption of gene expression in human maternal chromosome 15 microcell transferred neurons.2010

    • Author(s)
      Horike S.
    • Organizer
      Sweden-Japan Joint Colloquium
    • Place of Presentation
      Karolinska Institutet (Sweden)
    • Year and Date
      2010-09-06
    • Related Report
      2010 Final Research Report
  • [Presentation] Homologous pairing of chromosome 15q11-q13 is associated with significant disruption of gene expression in human maternal chromosome 15 microcell transferred neurons.2010

    • Author(s)
      堀家慎一
    • Organizer
      Sweden-Japan Joint Colloquium
    • Place of Presentation
      Karolinska Institutet(Sweden)
    • Year and Date
      2010-09-06
    • Related Report
      2010 Annual Research Report
  • [Presentation] ヒト15番染色体を保持したトランスクロモソミックマウスの作出2010

    • Author(s)
      堀家牧子
    • Organizer
      第4回大会日本エピジェネティクス研究会
    • Place of Presentation
      米子市文化ホール(鳥取県)
    • Year and Date
      2010-05-29
    • Related Report
      2010 Annual Research Report
  • [Presentation] 母方15番染色体重複細胞株における15q11-q13領域の遺伝子発現および染色体ペアリングの解析2010

    • Author(s)
      堀家慎一
    • Organizer
      第4回大会日本エピジェネティクス研究会
    • Place of Presentation
      米子市文化ホール(鳥取県)
    • Year and Date
      2010-05-28
    • Related Report
      2010 Annual Research Report 2010 Final Research Report
  • [Presentation] Homologous pairing of chromosome 15q11-q13 is associated with significant disruption of gene expression in human maternal chromosome 15 microcell transferred neurons.2010

    • Author(s)
      Horike S.
    • Organizer
      The 9th Annual International Meeting for Autism Research
    • Place of Presentation
      Philadelphia Marriott (USA)
    • Year and Date
      2010-05-20
    • Related Report
      2010 Final Research Report
  • [Presentation] Homologous pairing of chromosome 15q11-q13 is associated with significant disruption of gene expression in human maternal chromosome 15 microcell transferred neurons.2010

    • Author(s)
      堀家慎一
    • Organizer
      The 9th Annual International Meeting for Autism Research
    • Place of Presentation
      Philadelphia Mrriott(USA)
    • Year and Date
      2010-05-20
    • Related Report
      2010 Annual Research Report
  • [Presentation] Epigenetics in Autism Research2010

    • Author(s)
      Horike S.
    • Organizer
      International Conference on Social Brain : Autism and Neuroethics
    • Place of Presentation
      金沢大学十全講堂(石川県)
    • Year and Date
      2010-03-25
    • Related Report
      2010 Final Research Report
  • [Presentation] Homologous pairing of chromosome 15q11-q13 is associated with significant disruption of gene expression within the paired region2009

    • Author(s)
      堀家慎一
    • Organizer
      第32回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(神奈川県)
    • Year and Date
      2009-12-09
    • Related Report
      2010 Final Research Report
  • [Presentation] Homologous pairing of chromosome 15q11-13 is associated with significant disruption of gene expression within the paired region.2009

    • Author(s)
      堀家慎一
    • Organizer
      第32回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(神奈川県)
    • Year and Date
      2009-12-09
    • Related Report
      2009 Annual Research Report
  • [Presentation] Characterization of regulatory sequences essential for homologous pairing of chromosome 15q11-q13.2009

    • Author(s)
      Horike S.
    • Organizer
      59^<th> Annual Meeting ; The American Society of Human Genetics
    • Place of Presentation
      Hawaii Convention Center (USA)
    • Year and Date
      2009-10-21
    • Related Report
      2010 Final Research Report
  • [Presentation] Characterization of regulatory sequences essential for homologous pairing of chromosome 15g11-132009

    • Author(s)
      Horike.S
    • Organizer
      The American Society of Human Genetics, 59^<th> Annual Meeting
    • Place of Presentation
      Hawaii Convention Center (USA)
    • Year and Date
      2009-10-21
    • Related Report
      2009 Annual Research Report
  • [Presentation] Characterization of regulatory sequences essential for homologous pairing of chromosome 15q11-q13.2009

    • Author(s)
      Horike S.
    • Organizer
      18^<th> Lake Shirakaba Conference
    • Place of Presentation
      Tokai University European Center (Denmark)
    • Year and Date
      2009-06-20
    • Related Report
      2010 Final Research Report
  • [Presentation] Characterization of regulatory sequences essential for homologous pairing of chromosome 15g11-132009

    • Author(s)
      Horike.S
    • Organizer
      18^<th> Lake Shirakaba Conference
    • Place of Presentation
      Tokai University European Center (Denmark)
    • Year and Date
      2009-06-20
    • Related Report
      2009 Annual Research Report
  • [Presentation] ヒト染色体工学を用いた15q11-13の染色体ペアリングの解析2009

    • Author(s)
      堀家慎一
    • Organizer
      第3回日本エピジェネティクス研究会
    • Place of Presentation
      学術総合センター(東京都)
    • Year and Date
      2009-05-23
    • Related Report
      2009 Annual Research Report
  • [Presentation] ヒト染色体工学を用いた15q11-13の染色体ペアリングの解析2009

    • Author(s)
      堀家慎一
    • Organizer
      第3回大会日本エピジェネティクス研究会
    • Place of Presentation
      学術総合センター(東京都)
    • Year and Date
      2009-05-22
    • Related Report
      2010 Final Research Report

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Published: 2009-04-01   Modified: 2016-04-21  

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