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Analysis of epigenetic regulation of cone opsin expression by COUP-TF nuclear receptors

Research Project

Project/Area Number 21770136
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field Functional biochemistry
Research InstitutionThe University of Tokyo

Principal Investigator

SATOH Shinya  The University of Tokyo, 医科学研究所, 特任助教 (80333558)

Project Period (FY) 2009 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥4,550,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥1,050,000)
Fiscal Year 2010: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Fiscal Year 2009: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Keywords網膜 / 核内受容体 / オプシン
Research Abstract

Previously we demonstrated that COUP-TF nuclear receptors contribute to the establishment of dorso-ventral expression pattern of cone opsins in mouse retina. In this study I'd like to clarify the mechanism of this regulation by focusing on epigenetic mechanism. I analyzed DNA methylation status of dorsal- and ventral-region of mouse retina, or DNA methylation and histone modification status in retinoblastoma cell line in which endogenous COUP-TFs were knocked down by shRNA. However, significant correlation between COUP-TFs expression and these epigenetic status has not been seen yet. On the other hand, I identified TRbeta2 regulating genomic region in human red opsin gene and found that COUP-TFs show the different effect on TRbeta2-mediated activation in this genomic region between human and mouse genome. Furthermore, I found that Brg1, a chromatin remodeling factor, activates blue opsin gene expression and COUP-TFs suppress this Brg1-mediated activation. These results suggest that COUP-TFs regulate cone opsin expression in retina through interaction of these factors, which establishes each animal specific cone opsin expression pattern.

Report

(3 results)
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report
  • Research Products

    (6 results)

All 2010 2009 Other

All Journal Article (3 results) (of which Peer Reviewed: 3 results) Presentation (2 results) Remarks (1 results)

  • [Journal Article] COUP-TFI and -TFII nuclear receptors are expressed in amacrine cells and play roles in regulating the differentiation of retinal progenitor cells.2010

    • Author(s)
      Inoue M, Iida A, Satoh S, Kodama T, Watanabe S.
    • Journal Title

      Experimental Eye Research Vol.90, No.1

      Pages: 49-56

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] The spatial patterning of mouse cone opsin expression is regulated by bone morphogenetic protein signaling through downstream effector COUP-TF nuclear receptors.2009

    • Author(s)
      Satoh S, Tang K, Iida A, Inoue M, Kodama T, Tsai SY, Tsai MJ, Furuta Y, Watanabe S.
    • Journal Title

      Jouranl of Neuroscience Vol.29, No.40

      Pages: 12401-12411

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] The spatial patterning of mouse cone opsin expression is regulated byBMP signaling through downstream effector COUP-TF nuclear receptors2009

    • Author(s)
      Satoh, S., et al.
    • Journal Title

      J.Neurosci. 29

      Pages: 12401-12411

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Presentation] The spatial patterning of mouse cone opsin expression is regulated by BMP signaling through downstream effector COUP-TF nuclear receptors.2009

    • Author(s)
      佐藤伸哉
    • Place of Presentation
      沖縄県恩納村OISTシーサイドハウス
    • Related Report
      2010 Final Research Report
  • [Presentation] The spatial patterning of mouse cone opsin expression is regulated by BMP signaling through downstream effector COUP-TF nuclear receptors2009

    • Author(s)
      佐藤伸哉
    • Organizer
      GIST International Workshop The Retina : Neura Stem Cells and Photoreceptor Degeneration
    • Place of Presentation
      沖縄県恩納村OISTシーサイドハウス
    • Related Report
      2009 Annual Research Report
  • [Remarks] ホームページ

    • URL

      http://www.ims.u-tokyo.ac.jp/moldev/

    • Related Report
      2010 Final Research Report

URL: 

Published: 2009-04-01   Modified: 2016-04-21  

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