Study on Circadian Clock-Dependent Control of Growth and Development in Plants

• Project/Area Number: 21780092
• Research Category: Grant-in-Aid for Young Scientists (B)
• Allocation Type: Single-year Grants
• Research Field: Applied biochemistry
• Research Institution: Nagoya University
• Principal Investigator: YAMASHINO Takafumi Nagoya University, 生命農学研究科, 助教 (00314005)
• Project Period (FY): 2009 – 2010
• Project Status: Completed (Fiscal Year 2010)
• Budget Amount: ¥4,550,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥1,050,000); Fiscal Year 2010: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000); Fiscal Year 2009: ¥2,470,000 (Direct Cost: ¥1,900,000、Indirect Cost: ¥570,000)
• Keywords: 概日時計 / 環境応答 / 光情報伝達 / 疑似レスポンスレギュレーター / 概日リズム / 細胞伸張

Research Abstract

The plant circadian clock generates rhythms with a period close to 24 h, and it controls a wide range of physiological and developmental oscillations in habitats under natural light/dark cycles. In this study, we clarified that the Pseudo Response Regulator (PRR) family represent elements necessary for the circadian clock to entrain properly to local time in response to light/dark and hot/cold cycles in natural habitats and is involved in the control of photoperiodic response of plant growth as well as flowering.

Research Products

• [Journal Article] Pseudo-Response Regulator (PRR) Homologues of the Moss Physcomitrella patens: Insights into the Evolution of the PRR Family in Land Plants. (2011)
  • Author(s): Satbhai SB, Yamashino T, Okada R, Nomoto Y, Mizuno T, Tezuka Y, Itoh T, Tomita M, Otsuki S, Aoki S.
  • Journal Title: DNA Res. 18 Pages: 39-52
  • Peer Reviewed
• [Journal Article] Pseudo-Response Regulator (PRR) Homologues of the Moss Physcomitrella patens : Insights into the Evolution of the PRR Family in Land Plants. (2011)
  • Author(s): Ishida K, Yamashino T, Nakanishi H, Mizuno T.
  • Journal Title: DNA Res. Volume: 18 Pages: 239-52
  • Peer Reviewed
• [Journal Article] Heterologous Expression and Functional Characterization of a Physcomitrella Pseudo Response Regulator Homolog, PpPRR2, in Arabidopsis (2011)
  • Author(s): Satbhai SB, Yamashino T, Mizuno T, Aoki S.
  • Journal Title: Biosci Biotechnol Biochem. Volume: (in press)(掲載確定)
  • NAID: 10028271962
  • Peer Reviewed
• [Journal Article] Classification of the genes involved in the two-component system of the moss Physcomitrella patens. (2010)
  • Author(s): Ishida K, Yamashino T, Nakanishi H, Mizuno T.
  • Journal Title: Biosci Biotechnol Biochem. 74 Pages: 2542-2545
  • NAID: 10027728585
  • Peer Reviewed
• [Journal Article] PHYTOCHROME-INTERACTING FACTORS PIF4 and PIF5 are implicated in the regulation of hypocotyl elongation in response to blue light in Arabidopsis thaliana. (2010)
  • Author(s): Kunihiro A, Yamashino T, Mizuno T.
  • Journal Title: Biosci Biotechnol Biochem. 74 Pages: 2538-2541
  • NAID: 10027728561
  • Peer Reviewed
• [Journal Article] Biochemical characterization of plant hormone cytokinin-receptor histidine kinases using microorganisms. (2010)
  • Author(s): Mizuno T, Yamashino T.
  • Journal Title: Methods Enzymol. 471 Pages: 335-356
• [Journal Article] Genomewide characterization of the light-responsive and clock-controlled output pathways in Lotus japonicus with special emphasis of its uniqueness. (2010)
  • Author(s): Ono N, Ishida K, Yamashino T, Nakanishi H, Sato S, Tabata S, Mizuno T.
  • Journal Title: Plant Cell Physiol. 51 Pages: 1800-1814
  • NAID: 10027353833
  • Peer Reviewed
• [Journal Article] Genomewide characterization of the light-responsive and clock-controlled output pathways in Lotus japonicus with special emphasis of its uniqueness. (2010)
  • Author(s): Ono N, Ishida K, Yamashino T, Nakanishi H, Sato S, Tabata S, Mizuno T.
  • Journal Title: Plant Cell Physiol. Volume: 51 Pages: 1800-1814
  • NAID: 10027353833
  • Peer Reviewed
• [Journal Article] Biochemical characterization of plant hormone cytokinin-receptor histidine kinases using microorganisms. (2010)
  • Author(s): Mizuno T, Yamashino T.
  • Journal Title: Methods Enzymol. Volume: 471 Pages: 335-356
• [Journal Article] PHYTOCHROME-INTERACTING FACTORS PIF4 and PIF5 are implicated in the regulation of hypocotyl elongation in response to blue light in Arabidopsis thaliana. (2010)
  • Author(s): Kunihiro A, Yamashino T, Mizuno T.
  • Journal Title: Biosci Biotechnol Biochem. Volume: 74 Pages: 2538-2541
  • NAID: 10027728561
  • Peer Reviewed
• [Journal Article] A stressful episode in plant biology: Are you a real ABA receptor?-Give me a break (2009)
  • Author(s): 水野猛、山篠貴史
  • Journal Title: 化学と生物 47 Pages: 446-449
  • NAID: 10026435787
• [Journal Article] 植物の成長を制御するサイトカイニン情報伝達機構 (2009)
  • Author(s): 山篠貴史、水野猛
  • Journal Title: 化学と生物 47 Pages: 312-322
• [Journal Article] Mizuno T A genome-wide compilation of the two-component systems in Lotus japonicus. (2009)
  • Author(s): Ishida K, Niwa Y, Yamashino T
  • Journal Title: DNA Res. 16 Pages: 237-247
  • Peer Reviewed
• [Journal Article] The circadian clock regulates the photoperiodic response of hypocotyl elongation through a coincidence mechanism in Arabidopsis thaliana. (2009)
  • Author(s): Niwa Y, Yamashino T, Mizuno T.
  • Journal Title: Plant Cell Physiol. 50 Pages: 838-854
  • NAID: 10027339732
  • Peer Reviewed
• [Journal Article] A genome-wide compilation of the two-component systems in Lotus japonicus. (2009)
  • Author(s): Ishida K, Niwa Y, Yamashino T, Mizuno T
  • Journal Title: DNA Res. 16 Pages: 237-247
  • Peer Reviewed
• [Journal Article] The circadian clock regulates the photoperiodic response of hypocotyl elongation through acoincidence mechanism in Arabidopsis thaliana. (2009)
  • Author(s): Niwa Y, Yamashino T, Mizuno T
  • Journal Title: Plant Cell Physiol. 50 Pages: 838-854
  • Peer Reviewed
• [Journal Article] Transcript profiling of an Arabidopsis PSEUDO RESPONSE REGULATOR arrhythmic triple mutant reveals a role for the circadian clock in cold stress response. (2009)
  • Author(s): Nakamichi N, Kusano M, Fukushima A, Kita M, Ito S, Yamashino T, Saito K, Sakakibara H, Mizuno T
  • Journal Title: Plant Cell Physiol. 50 Pages: 447-462
  • NAID: 10027338110
  • Peer Reviewed
• [Journal Article] A genetic study of the Arabidopsis circadian clock with reference to the TIMING OF CAB EXPRESSION 1 (TOC1) gene. (2009)
  • Author(s): Ito S, Kawamura H, Niwa Y, Nakamichi N, Yamashino T, Mizuno T
  • Journal Title: Plant Cell Physiol. 50 Pages: 290-303
  • NAID: 40016472338
  • Peer Reviewed
• [Presentation] ミヤコグサにおける避陰反応と腋芽分制御 (2011)
  • Author(s): 中西華代, 堀菜七子, 山篠貴史, 水野猛
  • Organizer: 第52回日本植物生理学会年会
  • Place of Presentation: 要旨集
  • Year and Date: 2011-03-11
• [Presentation] bHLH型転写因子PIF4/PIF5は短日条件特異的にATHB2遺伝子の転写を誘導しシロイヌナズナの光周期依存的胚軸伸張制御を支えている (2011)
  • Author(s): 山篠貴史, 国広篤史, 中西華代, 水野猛
  • Organizer: 第52回日本植物生理学会年会
  • Place of Presentation: 要旨集
  • Year and Date: 2011-03-11
• [Presentation] ミヤコグサにおける二成分制御系と根粒形成機構 (2011)
  • Author(s): 石田快, 山篠貴史, 水野猛
  • Organizer: 第52回日本植物生理学会年会
  • Place of Presentation: 要旨集
  • Year and Date: 2011-03-11
• [Presentation] ヒメツリガネゴケにおける進化的に保存された光応答転写因子群の解析 (2011)
  • Author(s): 山脇沙織、山篠貴史、水野猛
  • Organizer: 第52回日本植物生理学会年会
  • Place of Presentation: 要旨集
  • Year and Date: 2011-03-11
• [Presentation] ヒネツリガネゴケにおける進化的に保存された光応答転写因子群の解析 (2011)
  • Author(s): 山脇沙織、山篠貴史、水野猛
  • Organizer: 第52回日本植物生理学会年会
  • Place of Presentation: 仙台
• [Presentation] bHLH型転写因子PIF4/PIF5は短日条件特異的にATHB2遺伝子の転写を誘導しシロイヌナズナの光周期依存的胚軸伸張制御を支えている (2011)
  • Author(s): 山篠貴史, 国広篤史, 中西華代, 水野猛
  • Organizer: 第52回日本植物生理学会年会
  • Place of Presentation: 仙台
• [Presentation] ミヤコグサにおける避陰反応と腋芽分制御 (2011)
  • Author(s): 中西華代, 堀菜七子, 山篠貴史, 水野猛
  • Organizer: 第52回日本植物生理学会年会
  • Place of Presentation: 仙台
• [Presentation] ミヤコグサにおける二成分制御系と根粒形成機構 (2011)
  • Author(s): 石田快, 山篠貴史, 水野猛
  • Organizer: 第52回日本植物生理学会年会
  • Place of Presentation: 仙台
• [Presentation] Informatics of plant two-component systems (TCS): (II) Diversification of TCS in the legume Lotus japonicus (2010)
  • Author(s): 石田快, 小野奈津子, 山篠貴史, 水野猛
  • Organizer: 第33回日本分子生物学会年会
  • Place of Presentation: 神戸
• [Presentation] A genome-wide informatics of plant two-component systems (TCS): (I) Evolution of TCS in the primitive land plant Physcomitrella patens (2010)
  • Author(s): 山脇沙織, 石田快, 山篠貴史, 水野猛
  • Organizer: 第33回日本分子生物学会年会
  • Place of Presentation: 神戸
• [Presentation] Circadian Regulated Response Regulators (CRRs) of Moss Physcomitrella patens and Evolution of Pseudo Response Regulators (PRRs) among Green Plants. (2010)
  • Author(s): Satbhai, Santosh B., Yamashino, Takafumi, Okada, Ryo, Mizuno, Takeshi, Mitsuru, Tomita, Aoki, Setsuyuki.
  • Organizer: ASPB Plant Biology
  • Place of Presentation: Montreal
• [Presentation] ヒメツリガネゴケ二成分情報伝達系遺伝子群のゲノムワイド俯瞰と解析 (2010)
  • Author(s): 山篠貴史、山脇沙織、Santosh Satbhai、青木摂之、水野猛
  • Organizer: 第51回日本植物生理学会大会
  • Place of Presentation: 熊本
• [Presentation] シロイヌナズナにおけるPIF4/5依存性光形態形成の分子機構:Web検察を用いた新しいアプローチの試み (2010)
  • Author(s): 国広篤史、山篠貴史、水野猛
  • Organizer: 第51回日本植物生理学会大会
  • Place of Presentation: 熊本
• [Presentation] ミヤコグサ二成分情報伝達系のゲノムワイド俯瞰と解析 (2010)
  • Author(s): 石田快、小野奈津子、山篠貴史、水野猛
  • Organizer: 第51回日本植物生理学会大会
  • Place of Presentation: 熊本
• [Presentation] ミヤコグサの光形態形成及び花成制御遺伝子群のゲノムワイド俯瞰と解析 (2010)
  • Author(s): 小野奈津子、石田快、山篠貴史、水野猛
  • Organizer: 第51回日本植物生理学会大会
  • Place of Presentation: 熊本
• [Presentation] Circadian Regulated Response Regulators (CRRs) of Moss Physcomitrella patens and Evolution of Pseudo Response Regulators (PRRs) among Green Plants. (2010)
  • Author(s): Satbhai, Santosh B., Yamashino, Takafumi, Okada, Ryo, Mizuno, Takeshi, Mitsuru, Tomita, Aoki, Setsuyuki
  • Organizer: ASPB Plant Biology 2010
  • Place of Presentation: Montreal, Canada
• [Presentation] Informatics of plant two-component systems (TCS) : (II) Diversification of TCS in the legume Lotus japonicus (2010)
  • Author(s): 石田快, 小野奈津子, 山篠貴史, 水野猛
  • Organizer: 第33回日本分子生物学会年会
  • Place of Presentation: 神戸ポートアイランド兵庫県
• [Presentation] A genome-wide informatics of plant two-component systems (TCS) : (I) Evolution of TCS in the primitive land plant Physcomitrella patens (2010)
  • Author(s): 山脇沙織, 石田快, 山篠貴史, 水野猛
  • Organizer: 第33回日本分子生物学会年会
  • Place of Presentation: 神戸ポートアイランド兵庫県
• [Presentation] ミヤコグサニ成分情報伝達系のゲノムワイド府瞰と解析 (2010)
  • Author(s): 石田快、小野奈津子、山篠貴史、水野猛
  • Organizer: 植物生理学会
  • Place of Presentation: 熊本
• [Presentation] シロイヌナズナにおけるPIF4/5依存性光形態形成の分子機構:Web検察を用いた新しいアプローチの試み (2010)
  • Author(s): 国広篤史、山篠貴史、水野猛
  • Organizer: 植物生理学会
  • Place of Presentation: 熊本
• [Presentation] ミヤコグサの光形態形成及び花成制御遺伝子群のゲノムワイド俯瞰と解析 (2010)
  • Author(s): 小野奈津子、石田快、山篠貴史、水野猛
  • Organizer: 植物生理学会
  • Place of Presentation: 熊本
• [Presentation] ヒメツリガネゴケニ成分情報伝達系遺伝子群のゲノムワイド俯瞰と解析 (2010)
  • Author(s): 山篠貴史、山脇沙織、Santosh Satbhai、青木摂之、水野猛
  • Organizer: 植物生理学会
  • Place of Presentation: 熊本
• [Presentation] Web-Query Aided in silico identification of ATHB2 as a Downsream Regulator of the Circadian Clock-Associated and Phytochrome-Interacting Factor PIF4-Mediated Signaling Pathway in Arabidopsis thaliana (2009)
  • Author(s): 国広篤史、丹羽悠介、山篠貴史、水野猛
  • Organizer: 第32回日本分子生物学会
  • Place of Presentation: 横浜
• [Presentation] Genome-Wide Compilation and Characterization of the Two-Component Signaling System-Associated Genes in the Model Legume Lotus japonicus (2009)
  • Author(s): 石田快、丹羽悠介、小野奈津子、山篠貴史、水野猛
  • Organizer: 第32回日本分子生物学会
  • Place of Presentation: 横浜
• [Presentation] 高等植物における二成分制御系関連分子の体系的解析 (2009)
  • Author(s): 山篠貴史
  • Organizer: 日本農芸化学会中部支部第155回例会
  • Place of Presentation: 静岡
• [Presentation] モデル高等植物シロイヌナズナの概日時計機構の解析 (2009)
  • Author(s): 山篠貴史・水野猛
  • Organizer: 第82回日本生化学会
  • Place of Presentation: 神戸
• [Presentation] モデル高等植物シロイヌナズナの概日時計機構の解析 (2009)
  • Author(s): 山篠貴史、水野猛
  • Organizer: 日本生化学会
  • Place of Presentation: 神戸
• [Presentation] Web-Query Aided in silico identification of ATHB2 as a Downsream Regulator of the Circadian Clock-Associated and Phytochrome-Interacting Factor PIF4-Mediated Signaling Pathway in Arabidopsis thaliana (2009)
  • Author(s): 国広篤史、丹羽悠介、山篠貴史、水野猛
  • Organizer: 日本分子生物学会
  • Place of Presentation: 横浜
• [Presentation] Genome-Wide Compilation and Characterization of the Two-Component Signaling System-Associated Genes in the Model Legume Lotus japonicus (2009)
  • Author(s): 石田快、丹羽悠介、小野奈津子、山篠貴史、水野猛
  • Organizer: 日本分子生物学会
  • Place of Presentation: 横浜
• [Presentation] 高等植物における二成分制御系関連分子の体系的解析 (2009)
  • Author(s): 山篠貴史
  • Organizer: 日本農芸化学会中部支部会
  • Place of Presentation: 静岡
• [Book] 植物の時計、植物のシグナル伝達分子と応答 (2010)
  • Author(s): 山篠貴史、水野猛
  • Publisher: 共立出版
• [Book] 植物の概日時計分子機構、光周性の分子生物学 (2009)
  • Author(s): 水野猛、山篠貴史
  • Publisher: シュプリンガー・ジャパン
• [Book] 化学と生物(植物の成長を制御するサイトカイニン情報伝達機構) (2009)
  • Author(s): 山篠貴史、水野猛
  • Total Pages: 11
  • Publisher: 学会出版センター
• [Book] 化学と生物(A stressful episode in plant biology : Are you a real ABA receptor?-Give me a break) (2009)
  • Author(s): 水野猛、山篠貴史
  • Total Pages: 4
  • Publisher: 学会出版センター
• [Book] 光周性の分子生物学(植物の概日時計分子機構) (2009)
  • Author(s): 水野猛、山篠貴史
  • Total Pages: 12
  • Publisher: SPRINGER
• [Remarks] ホームページ等
  • URL: http://www.agr.nagoya-u.ac.jp/~microbio/entrance.html