• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Chenical biology research using diketopiperazine-based anti-microtubule agent.

Research Project

Project/Area Number 21790118
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field Drug development chemistry
Research InstitutionTokyo University of Pharmacy and Life Science

Principal Investigator

YAMAZAKI Yuri  Tokyo University of Pharmacy and Life Science, 薬学部, 助手 (70459725)

Project Period (FY) 2009 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2010: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2009: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Keywords分子認識 / 医薬品化学 / 癌 / 生体分子 / 薬学 / チューブリン
Research Abstract

In order to understand the precise binding site of diketopiperadine-based anti-microtubule agent 'plinabulin' on tubulin, we designed and synthesized biotin-tagged plinabulin derivatives as chemical probes. Since these derivatives all showed a significant binding ability to tubulin and cytotoxicity, we performed tubulin photoaffinity labeling study. These results suggested that plinabulin derivatives may bind at the boundary region formed between the α-and β-tubulin subunits around the colchicine binding site, but not inside the site, to effectively disrupt the interaction between the two tubulin subunits, thereby producing microtubule depolymerization.

Report

(3 results)
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report
  • Research Products

    (35 results)

All 2011 2010 2009 Other

All Journal Article (14 results) (of which Peer Reviewed: 14 results) Presentation (18 results) Remarks (3 results)

  • [Journal Article] Tubulin photoaffinity labeling study with a plinabulin chemical probe possessing a biotin tag at the oxazole.2011

    • Author(s)
      Yuri Yamazaki, Yui Kido, Koushi Hidaka, Hiroyuki Yasui, Yoshiaki Kiso, Fumika Yakushiji, Yoshio Hayashi
    • Journal Title

      Bioorganic & Medicinal Chemistry 19

      Pages: 595-602

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Tubulin photoaffinity labeling study with a plinabulin chemical probe possessing a biotin tag at the oxazole2011

    • Author(s)
      Yuri Yamazaki, 他6人
    • Journal Title

      Bioorganic & Medicinal Chemistry

      Volume: 19(1) Pages: 595-602

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Anti-microtubule 'plinabulin' chemical probe KPU-244-B3 labeled both α- and β-tubulin2010

    • Author(s)
      Yuri Yamazaki, Makiko Sumikura, Koushi Hidaka, Hiroyuki Yasui, Yoshiaki Kiso, Fumika Yakushiji, Yoshio Hayashi
    • Journal Title

      Bioorganic & Medicinal Chemistry 18

      Pages: 3169-3174

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Total synthesis of (+)-neganycin and its 5-epi-derivatives.2010

    • Author(s)
      Shigenobu Nishiguchi, Magne O.Sydnes, Akihiro Taguchi, Thomas Regnier, Tetsuya Kajimoto, Manabu Node, Yuri Yamazaki, Fumika Yakushiji, Yoshiaki Kiso, Yoshio Hayashi
    • Journal Title

      Tetrahedron 66

      Pages: 314-320

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Synthesis and antimicrobial activity of (+)-negamycin derivatives focused on the hydrazine amide moiety.2010

    • Author(s)
      Akihiro Taguchi, Mayuko Ina, Yuri Yamazaki, Fumika Yakushiji, Yoshikazu Takahashi, Yoshiaki Kiso, Yoshio Hayashi
    • Journal Title

      Peptide Science 46

      Pages: 317-318

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Synthesis and structure-activity relationship study of cyclic dipeptide-based microtubule depolymerization agents with a benzophenone structure.2010

    • Author(s)
      Makiko Sumikura, Yuri Yamazaki, Tomoko Yoshida, Yuki Mori, Hiroyuki Yasui, Yoshiaki Kiso, Saskia Neuteboom, Barbara Potts, G.Kenneth Lloyd, Yoshio Hayashi
    • Journal Title

      Peptide Science 46

      Pages: 315-316

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Synthesis and antimicrobial activity of (+)-negamycin derivatives focused on the hydrazine amide moiety2010

    • Author(s)
      Akihiro Taguchi, Yuri Yamazaki, Yoshio Hayashi, 他6人
    • Journal Title

      Peptide Science

      Volume: 46 Pages: 317-318

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Synthesis and structure-activity relationship study of cyclic dipeptide-based microtubule depolymerization agents with a benzophenone structure2010

    • Author(s)
      Makiko Sumikura, Yuri Yamazaki, Yoshio Hayashi, 他8人
    • Journal Title

      Peptide Science

      Volume: 46 Pages: 315-316

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Anti-microtubule "plinabulin" chemical probe KPU-244-B3 labeled both α- and β-tubulin2010

    • Author(s)
      Yuri Yamazaki, 他6人
    • Journal Title

      Bioorganic & Medicinal Chemistry (In press)

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Total synthesis of(+)-neganycin and its 5-epi-derivatives2010

    • Author(s)
      Yoshio Hayashi, Yuri Yamazaki, 他8人
    • Journal Title

      Tetrahedron 66(1)

      Pages: 314-320

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Acid catalyzed monodehydro-2,5-diketopiperazine formation from N-α-ketoacyl amino acid amides.2009

    • Author(s)
      Yuri Yamazaki, Yuki Mori, Akiko Oda, Yuka Okuno, Yoshiaki Kiso, Yoshio Hayashi
    • Journal Title

      Tetrahedron 65

      Pages: 3688-3694

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Acid catalyzed monodehydro-2,5-diketopiperazine formation toward natural productsynthesis.2009

    • Author(s)
      Yuri Yamazaki, Yuki Mori, Akiko Oda, Yoshiaki Kiso, Yoshio Hayashi
    • Journal Title

      Peptides Breaking Away Proc.21st Amer.Peptide Symp.(Ed.Michal Lebl)

      Pages: 54-55

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Acid catalyzed monodehydro-2,5-diketopiperazine formation from N-α-ketoacyl amino acid amides2009

    • Author(s)
      Yuri Yamazaki, 他5人
    • Journal Title

      Tetrahedron 65(18)

      Pages: 3688-3694

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Acid catalyzed monodehydro-2,5-diketopiperazine formation toward natural product synthesis2009

    • Author(s)
      Yuri Yamazaki, 他5人
    • Journal Title

      Peptides Breaking Away : Proc. 21st Amer. Peptide Symp.(Ed. Michal Lebl)

      Pages: 54-55

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Presentation] Development of chemical probes towards the elucidation of binding mechanism of plinabulin, a cyclicdipeptide based anti-microtubule agent.2010

    • Author(s)
      Yuri Yamazaki, Yui Kido, Koushi Hidaka, Hiroyuki Yasui, Yoshiaki Kiso, Fumika Yakushiji, Yoshio Hayashi
    • Organizer
      5th International Peptide Symposium in conjunction with 47th Japanese Peptide Symposium
    • Place of Presentation
      Kyoto
    • Year and Date
      2010-12-04
    • Related Report
      2010 Final Research Report
  • [Presentation] Development of chemical probes towards the elucidation of binding mechanism of plinabulin, a cyclicdipeptide based anti-microtubule agent2010

    • Author(s)
      Yuri Yamazaki, 他6人
    • Organizer
      5th International Peptide Symposium in conjunction with 47th Japanese Peptide Symposium
    • Place of Presentation
      Kyoto
    • Year and Date
      2010-12-04
    • Related Report
      2010 Annual Research Report
  • [Presentation] 新生血管を障害するチューブリン重合阻害剤の創製2010

    • Author(s)
      林良雄
    • Organizer
      日本放射線腫瘍学会第23回学術大会
    • Place of Presentation
      千葉
    • Year and Date
      2010-11-18
    • Related Report
      2010 Annual Research Report 2010 Final Research Report
  • [Presentation] 微小管作用薬Plinabulinの作用様式解明を目指したケミカルプローブの開発2010

    • Author(s)
      山崎有理、城戸結衣、日高興士、安井裕之、木曽良明、薬師寺文華、林良雄
    • Organizer
      第29回メディシナルケミストリーシンポジウム
    • Place of Presentation
      京都
    • Year and Date
      2010-11-17
    • Related Report
      2010 Annual Research Report 2010 Final Research Report
  • [Presentation] Plinabulinケミカルプローブの開発とプローブの機能評価2010

    • Author(s)
      山崎有理、林良雄
    • Organizer
      第14回日本がん分子標的治療学会学術集会
    • Place of Presentation
      東京
    • Year and Date
      2010-07-06
    • Related Report
      2010 Annual Research Report 2010 Final Research Report
  • [Presentation] 新生血管内皮細胞を障害するジケトピペラジン型微小管脱重合剤の創製2010

    • Author(s)
      林良雄、山崎有理
    • Organizer
      第14回日本がん分子標的治療学会学術集会
    • Place of Presentation
      東京
    • Year and Date
      2010-07-06
    • Related Report
      2010 Annual Research Report 2010 Final Research Report
  • [Presentation] ジケトピペラジン型微小管作用薬Plinabulinを基盤としたケミカルプローブの開発2010

    • Author(s)
      山崎有理、角倉真紀子、河野享子、日高興士、安井裕之、木曽良明、薬師寺文華、林良雄
    • Organizer
      日本ケミカルバイオロジー学会第5回年会
    • Place of Presentation
      東京
    • Year and Date
      2010-05-18
    • Related Report
      2010 Annual Research Report 2010 Final Research Report
  • [Presentation] 酸触媒環化反応を用いたモノデヒドロ-2,5-ジケトピペラジン化合物の合成研究2010

    • Author(s)
      山崎有理、森雄樹、小田暁子、奥野友香、木曽良明、林良雄
    • Organizer
      日本薬学会第130年会
    • Place of Presentation
      岡山
    • Related Report
      2010 Final Research Report 2009 Annual Research Report
  • [Presentation] Plinabulin' a diketopiperazine-type vascular targeting anti-cancer agent based on microtubule depolymerization activity.2010

    • Author(s)
      Yoshio Hayashi, Yuri Yamazaki, Makiko Sumikura, Tomoko Yoshida, Yuki Mori, Hiroyuki Yasui, Kyoko Kohno, Yoshiaki Kiso, Saskia Neuteboom, Barbara Potts, G.Kenneth Lloyd
    • Organizer
      ACS Spring 2010 National Meeting & Exposition
    • Place of Presentation
      San Francisco, USA
    • Related Report
      2010 Final Research Report
  • [Presentation] 'Plinabulin' a diketopiperazine-type vascular targeting anti-cancer agent based on microtubule depolvmerization activity2010

    • Author(s)
      Yoshio Hayashi, Yuri Yamazaki, 他9人
    • Organizer
      ACS Spring 2010 National Meeting & Exposition
    • Place of Presentation
      San Francisco, USA
    • Related Report
      2009 Annual Research Report
  • [Presentation] ベンゾフェノン構造を有するジケトピペラジン型微小管脱重合剤の開発2009

    • Author(s)
      角倉真紀子、山崎有理、吉田智子、森雄樹、安井裕之、木曽良明、Saskia Neuteboom, Barbara Potts, G.Kenneth Lloyd, 林良雄
    • Organizer
      第28回メディシナルケミストリーシンポジウム
    • Place of Presentation
      東京
    • Related Report
      2010 Final Research Report 2009 Annual Research Report
  • [Presentation] Plinabulin" a cyclic dipeptide-based vascular targeting anti-cancer agent based on microtubule depolymerization activity.2009

    • Author(s)
      Yoshio Hayashi, Yuri Yamazaki, Makiko Sumikura, Tomoko Yoshida, Yuki Mori, Hiroyuki Yasui, Kyoko Kohno, Yoshiaki Kiso, Saskia Neuteboom, Barbara Potts, G.Kenneth Lloyd
    • Organizer
      3rd Asia-Pacific International Peptide Symposium/13th Korean Peptide and Protein Symposium
    • Place of Presentation
      Jeju Island, Korea
    • Related Report
      2010 Final Research Report
  • [Presentation] Synthesis and structure-activity relationship study of cyclic dipeptide-based microtubule depolymerization agents with a benzophenone structure.2009

    • Author(s)
      Makiko Sumikura, Yuri Yamazaki, Tomoko Yoshida, Yuki Mori, Hiroyuki Yasui, Yoshiaki Kiso, Saskia Neuteboom, Barbara Potts, G.Kenneth Lloyd, Yoshio Hayashi
    • Organizer
      46th Japanese Peptide Symposium
    • Place of Presentation
      Kitakyusyu
    • Related Report
      2010 Final Research Report
  • [Presentation] Cyclic dipeptide-based microtubule depolymerization agents as vascular targeting anti-cancer drugs2009

    • Author(s)
      Yuri Yamazaki, Makiko Sumikura, Tomoko Yoshida, Yuki Mori, Hiroyuki Yasui, Kyoko Kohno, Yoshiaki Kiso, Gordafaried Deyanat-Yazdi, Saskia Neuteboom, Barbara Potts, G.Kenneth Lloyd, Yoshio Hayashi
    • Place of Presentation
      Chains, Australia
    • Related Report
      2010 Final Research Report
  • [Presentation] Acid catalyzed monodehydro-2,5-diketopiperazine formation toward natural product synthesis.2009

    • Author(s)
      Yuri Yamazaki, Yuki Mori, Akiko Oda, Yoshiaki Kiso, Yoshio Hayashi
    • Organizer
      21st American Peptide Symposium : Breaking Away
    • Place of Presentation
      Bloomington, USA
    • Related Report
      2010 Final Research Report 2009 Annual Research Report
  • [Presentation] Plinabulin a cyclic dipeptide-based vascular targeting anti-cancer agent based on microtubule depolymerization activity.2009

    • Author(s)
      Yoshio Hayashi, Yuri Yamazaki, 他9人
    • Organizer
      3rd Asia-Pacific International Peptide Symposium/13th Korean Peptide and Protein Symposium
    • Place of Presentation
      Jeju Island, Korea
    • Related Report
      2009 Annual Research Report
  • [Presentation] Synthesis and structure-activity relationship study of cyclic dipeptide-based microtubule depolymerization agents with a benzophenone structure2009

    • Author(s)
      Yuri Yamazaki, Yoshio Hayashi, 他8人
    • Organizer
      46th Japanese Peptide Symposium
    • Place of Presentation
      北九州
    • Related Report
      2009 Annual Research Report
  • [Presentation] Cyclic dipeptide-based microtubule depolymerization agents as vascular targetinganti-cancer drugs2009

    • Author(s)
      Yuri Yamazaki, Yoshio Hayashi, 他10人
    • Organizer
      7th AFMC International Medicinal Chemistry Congress
    • Place of Presentation
      Chains, Australia
    • Related Report
      2009 Annual Research Report
  • [Remarks] ホームページ等

    • Related Report
      2010 Final Research Report
  • [Remarks] 東京薬科大学ホームページ、研究室紹介

    • URL

      http://www.toyaku.ac.jp/departments/pharmacy04_03_05_j.html

    • Related Report
      2010 Final Research Report
  • [Remarks] (東京薬科大学ホームページ、研究室紹介)

    • URL

      http://www.toyaku.ac.jp/departments/pharmacy04_03_05_j.html

    • Related Report
      2010 Annual Research Report

URL: 

Published: 2009-04-01   Modified: 2016-04-21  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi