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Genome-wide search for a candidate gene in systemic lupus erythematosus

Research Project

Project/Area Number 21790991
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field Pediatrics
Research InstitutionThe University of Tokushima

Principal Investigator

KITAMURA Akiko  The University of Tokushima, 大学院・ヘルスバイオサイエンス研究部, 助教 (10448318)

Project Period (FY) 2009 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2010: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Fiscal Year 2009: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Keywords全身性エリテマトーデス / ポジショナルクローニング
Research Abstract

Systemic lupus erythematosus (SLE) is a multifactorial disease in which both genetic and environmental factors are involved. Genome wide association studies revealed many predisposing genes to common forms of SLE. However, those studies have failed to identify genes that strongly contribute to the pathogenesis of SLE. We found one consanguineous SLE family, which consists of 3 affected and 1 unaffected sibling. To identify the underlying gene, we performed a homozygosity mapping and revealed two homozygous regions (FSLE-1, FSLE-2) that spanned 0.7 Mb and 1.1 Mb, respectively. MLOD score was 1.7 and 2.5, respectively. The FSLE-1 did not contain any gene, but the FSLE-2 region contained 40 known and predicted genes. We plan to perform the capture-resequencing analysis of the FSLE-2 region.

Report

(3 results)
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report
  • Research Products

    (9 results)

All 2011 2010 2009

All Journal Article (6 results) Presentation (3 results)

  • [Journal Article] Notch signaling regulates the development of a novel type of Thy1-expressing dendritic cell in the thymus.2011

    • Author(s)
      Ishifune C, Maekawa Y, Nishida J, Kitamura A, Tanigaki K, Yagita H, Yasutomo K.
    • Journal Title

      Eur J Immunol 41

      Pages: 1309-1320

    • Related Report
      2010 Final Research Report
  • [Journal Article] Notch signaling drives IL-22 secretion in CD4+ T cells by stimulating the aryl hydrocarbon receptor.2010

    • Author(s)
      Alam MS, Maekawa Y, Kitamura A, Tanigaki K, Yoshimoto T, Kishihara K, Yasutomo K.
    • Journal Title

      Proc Natl Acad Sci USA 107

      Pages: 5943-5948

    • Related Report
      2010 Final Research Report
  • [Journal Article] ERK5 activation enhances mesangial cell viability and collagen matrix accumulation in rat progressive glomerulonephritis.2010

    • Author(s)
      Urushihara M, Takamatsu M, Shimizu M, Kondo S, Kinoshita Y, Suga K, Kitamura A, Matsuura S, Yoshizumi M, Tamaki T, Kawachi H, Kagami S.
    • Journal Title

      Am J Physiol Renal Physiol 298

    • Related Report
      2010 Final Research Report
  • [Journal Article] Notch2 signaling is required for potent anti-tumor immunity in vivo.2010

    • Author(s)
      Sugimoto K, Maekawa Y, Kitamura A, Nishida J, Koyanagi A, Yagita H, Kojima H, Chiba S, Shimada M, Yasutomo K.
    • Journal Title

      J Immunol 184

      Pages: 4673-4678

    • Related Report
      2010 Final Research Report
  • [Journal Article] Jagged1 suppresses collagen-induced arthritis by indirectly providing a negative signal in CD8+ T cells.2009

    • Author(s)
      Kijima M, Iwata A, Maekawa Y, Uehara H, Izumi K, Kitamura A, Yagita H, Chiba S, Shiota H, Yasutomo K.
    • Journal Title

      J Immunol 182

      Pages: 3566-3572

    • Related Report
      2010 Final Research Report
  • [Journal Article] Predisposition to relapsing nephrotic syndrome by a nephrin mutation that interferes with assembly of functioning microdomains.2009

    • Author(s)
      Shono A, Tsukaguchi H, Kitamura A, Hiramoto R, Qin XS, Doi T, Iijima K.
    • Journal Title

      Hum Mol Genet 18

      Pages: 2943-2956

    • Related Report
      2010 Final Research Report
  • [Presentation] Identification of a candidate locus in familial systemic lupus erythematosus by homozygosity mapping2009

    • Author(s)
      Akiko Kitamura, Koji Yasutomo
    • Organizer
      American Society of Human Genetics 2009 Annual Meeting
    • Place of Presentation
      Hawaii Convention Center (USA)
    • Year and Date
      2009-10-21
    • Related Report
      2010 Final Research Report
  • [Presentation] Identification of a candidate locus in familial systemic lupuservthematosus by homozygosity mapping2009

    • Author(s)
      北村明子
    • Organizer
      American Society of Human Genetics 2009 Annual Meeting
    • Place of Presentation
      ハワイコンベンションセンター(アメリカ)
    • Year and Date
      2009-10-21
    • Related Report
      2009 Annual Research Report
  • [Presentation] ホモ接合体マッピングによる家族性全身性エリテマトーデスの疾患遺伝子探索2009

    • Author(s)
      北村明子、安友康二
    • Organizer
      第54回日本人類遺伝学会
    • Place of Presentation
      グランドプリンスホテル高輪(東京)
    • Year and Date
      2009-09-26
    • Related Report
      2010 Final Research Report 2009 Annual Research Report

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Published: 2009-04-01   Modified: 2016-04-21  

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