• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Construction of Protein-RNA conjugate for intracellular imaging of metabolites

Research Project

Project/Area Number 21850026
Research Category

Grant-in-Aid for Research Activity Start-up

Allocation TypeSingle-year Grants
Research Field Chemistry related to living body
Research InstitutionKonan University

Principal Investigator

ENDOH Tamaki  Konan University, 先端生命工学研究所, 講師 (90550236)

Project Period (FY) 2009 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥2,704,000 (Direct Cost: ¥2,080,000、Indirect Cost: ¥624,000)
Fiscal Year 2010: ¥1,287,000 (Direct Cost: ¥990,000、Indirect Cost: ¥297,000)
Fiscal Year 2009: ¥1,417,000 (Direct Cost: ¥1,090,000、Indirect Cost: ¥327,000)
Keywords代謝産物検 / 細胞内イメージング / RNA-タンパク質相互作用 / アロステリック相互作用 / RNA構造変化 / 代謝産物検出 / RNAセレクション / リボスイッチ / 代謝産物の検出
Research Abstract

In this study, construction of Protein-RNA conjugate, which enables detection of small molecules, was performed. RNA libraries that consist of artificial RNA aptamer and TAR-RNA were designed. RNAs that allosterically interact with Tat-peptide in the presence of the target small molecules were selected from the libraries. By cooperative function of artificially modified Luciferase containing Tat-peptide, the selected RNAs enabled luminometric detection of the small molecules. Additionally, direct conjugation of RNA aptamer and TAR-RNA enabled detection of small molecule by an intracellular gene expression though an allosteric interaction of Tat protein.

Report

(3 results)
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report
  • Research Products

    (28 results)

All 2011 2010 2009

All Journal Article (14 results) (of which Peer Reviewed: 10 results) Presentation (14 results)

  • [Journal Article] Gene Regulation System with an Artificial RNA Switch Operating in Human Cells2011

    • Author(s)
      Endoh T., Sugimoto N.
    • Journal Title

      Chembiochem 12

      Pages: 1174-1178

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] 話題「遺伝子制御を可能にするRNAの構造スイッチ」2011

    • Author(s)
      遠藤玉樹、杉本直己
    • Journal Title

      ファルマシア 47

      Pages: 146-150

    • Related Report
      2010 Final Research Report
  • [Journal Article] Direct detection of RNAs in living cells using peptide-inserted Renilla luciferase2011

    • Author(s)
      Andou T., Endoh T., Mie M., Kobatake E.
    • Journal Title

      Analyst 136

      Pages: 2446-2449

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Development of an RNA detection system using bioluminescence resonance energy transfer2011

    • Author(s)
      Andou T., Endoh T., Mie M., Kobatake E.
    • Journal Title

      Sensor Actuat.B Chem. 152

      Pages: 277-284

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Development of an RNA detection system using bioluminescence resonance energy transfer2011

    • Author(s)
      Andou T, Endoh T, Mie M, Kobatake E.
    • Journal Title

      Sensor Actuat.B Chem.

      Volume: 152 Pages: 277-284

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 話題「遺伝子制御を可能にするRNAの構造スイッチ」2011

    • Author(s)
      遠藤玉樹、杉本直己
    • Journal Title

      ファルマシア

      Volume: 47 Pages: 146-150

    • Related Report
      2010 Annual Research Report
  • [Journal Article] Cellular siRNA delivery using TatU1A and photo-induced RNA interference.2010

    • Author(s)
      Endoh T, Ohtsuki T.
    • Journal Title

      Methods Mol.Biol.

      Volume: 623 Pages: 271-281

    • Related Report
      2010 Annual Research Report
  • [Journal Article] Evaluation of small ligand-protein interactions by using T7 RNA polymerase with DNA-modified ligand2010

    • Author(s)
      Mie M, Sugita R, Endoh T, Kobatake E.
    • Journal Title

      Anal.Biochem.

      Volume: 405 Pages: 109-113

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 解説「タンパク質の合成を制御する環境-分子クラウディングによる時間概念-」2010

    • Author(s)
      杉本直己、遠藤玉樹
    • Journal Title

      現代化学

      Volume: 472 Pages: 26-31

    • Related Report
      2010 Annual Research Report
  • [Journal Article] Detection of bioactive small molecules by fluorescent resonance energy transfer (FRET) in RNA-protein conjugates2009

    • Author(s)
      Endoh T., Shintani R., Mie M., Kobatake E., Ohtsuki T., Sisido M.
    • Journal Title

      Bioconjug.Chem. 20

      Pages: 2242-2246

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Spatial regulation of specific gene expression through photoactivation of RNAi2009

    • Author(s)
      Tamaki ENDOH
    • Journal Title

      Journal of Controlled Release 137

      Pages: 241-245

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Carrier PNA for shRNA delivery into cells2009

    • Author(s)
      Tamaki ENDOH
    • Journal Title

      Bioorganic & Medical Chemistry Letters 19

      Pages: 3410-3413

    • NAID

      120003386546

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Detection of bioactive small molecules by fluorescent resonance energy transfer(FRET)in RNA-protein conjugates2009

    • Author(s)
      Tamaki ENDOH
    • Journal Title

      Bioconjugate Chemistry 20

      Pages: 2242-2246

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Cellular siRNA delivery using cell-penetrating peptides modified for endosomal escape2009

    • Author(s)
      Tamaki ENDOH
    • Journal Title

      Advanced Drug Delivery Review 61

      Pages: 704-709

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Presentation] 細胞内分子機能スイッチの構築に向けたタンパク質とのアロステリック相互作用を示すRNAのセレクション2011

    • Author(s)
      遠藤玉樹・杉本直己
    • Organizer
      日本化学会第91春季年会
    • Place of Presentation
      横浜
    • Year and Date
      2011-03-25
    • Related Report
      2010 Final Research Report
  • [Presentation] 生命分子の挙動に及ぼす分子環境の効果(25)mRNA構造に及ぼす分子クラウディング環境の影響2011

    • Author(s)
      村上健太郎・遠藤玉樹・杉本直己
    • Organizer
      日本化学会第91春季年会
    • Place of Presentation
      横浜
    • Related Report
      2010 Annual Research Report
  • [Presentation] 生命分子の挙動に及ぼす分子環境の効果(26)mRNAの高次構造が影響する翻訳伸長反応の解析手法の構築2011

    • Author(s)
      川崎悠・遠藤玉樹・杉本直己
    • Organizer
      日本化学会第91春季年会
    • Place of Presentation
      横浜
    • Related Report
      2010 Annual Research Report
  • [Presentation] 生命分子の挙動に及ぼす分子環境の効果(27)細胞内分子機能スイッチの構築に向けたタンパク質とのアロステリック相互作用を示すRNAのセレクション2011

    • Author(s)
      遠藤玉樹・杉本直己
    • Organizer
      日本化学会第91春季年会
    • Place of Presentation
      横浜
    • Related Report
      2010 Annual Research Report
  • [Presentation] Control of gene expression through an allosteric interaction of transactivator protein and its target RNA2010

    • Author(s)
      Endoh T., Sugimoto N.
    • Organizer
      The 37th International Symposium on Nucleic Acids Chemistry 2010
    • Place of Presentation
      Yokohama
    • Year and Date
      2010-11-10
    • Related Report
      2010 Final Research Report
  • [Presentation] 分子クラウディング環境におけるリボスイッチRNAの高次構造安定化に対する熱力学的定量評価2010

    • Author(s)
      遠藤玉樹・村上健太郎・杉本直己
    • Organizer
      第4回バイオ関連化学シンポジウム
    • Place of Presentation
      大阪
    • Year and Date
      2010-09-25
    • Related Report
      2010 Annual Research Report 2010 Final Research Report
  • [Presentation] タンパク質-RNA間相互作用を活用したヒト細胞内で機能する人工リボスイッチシステムの構築2010

    • Author(s)
      遠藤玉樹・杉本直己
    • Organizer
      日本化学会第90春季年会
    • Place of Presentation
      大阪
    • Year and Date
      2010-03-28
    • Related Report
      2010 Final Research Report
  • [Presentation] mRNAの熱安定性が及ぼす翻訳反応への影響2010

    • Author(s)
      川崎悠・村上健太郎・遠藤玉樹・杉本直己
    • Organizer
      第4回バイオ関連化学シンポジウム
    • Place of Presentation
      大阪
    • Related Report
      2010 Annual Research Report
  • [Presentation] Control of gene expression through an allosteric interaction of transactivator prote in and its target RNA2010

    • Author(s)
      T.Endah, N.Sugimoto
    • Organizer
      The 37th International Symposium on Nucleic Acids Chemistry 2010
    • Place of Presentation
      Yokohama
    • Related Report
      2010 Annual Research Report
  • [Presentation] Stabilization of the adenine-specific riboswitch in its ligand binding under molecular crowding condition2010

    • Author(s)
      K.Murakami, T.Endoh, N.Sugimoto
    • Organizer
      The 37th International Symposium on Nucleic Acids Chemistry 2010
    • Place of Presentation
      Yokohama
    • Related Report
      2010 Annual Research Report
  • [Presentation] 生命分子の挙動に及ぼす分子環境の効果(16)タンパク質-RNA間相互作用を活用したヒト細胞内で機能する人工リボスイッチシステムの構築2010

    • Author(s)
      遠藤玉樹
    • Organizer
      日本化学会第90春季年会
    • Place of Presentation
      近畿大学
    • Related Report
      2009 Annual Research Report
  • [Presentation] 生命分子の挙動に及ぼす分子環境の効果(15)アデニンリボスイッチのリガンド結合に及ぼす分子クラウディング環境の影響2010

    • Author(s)
      遠藤玉樹
    • Organizer
      日本化学会第90春季年会
    • Place of Presentation
      近畿大学
    • Related Report
      2009 Annual Research Report
  • [Presentation] RNA配列改変によるRNA-protein conjugateバイオセンサーの効率化2009

    • Author(s)
      遠藤玉樹・村上健太郎・新谷諒・小畠英理・大槻高史・宍戸昌彦・杉本直己
    • Organizer
      第24回生体機能関連化学シンポジウム
    • Place of Presentation
      福岡
    • Year and Date
      2009-09-14
    • Related Report
      2010 Final Research Report
  • [Presentation] RNA配列改変によるRNA-protein conjugateバイオセンサーの効率化2009

    • Author(s)
      遠藤玉樹
    • Organizer
      第24回生体機能関連化学シンポジウム
    • Place of Presentation
      九州大学
    • Related Report
      2009 Annual Research Report

URL: 

Published: 2009-04-01   Modified: 2016-04-21  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi