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Development of simple and accurate quantification method of waterborne pathogenic microorganisms using ABC-PCR

Research Project

Project/Area Number 21860094
Research Category

Grant-in-Aid for Research Activity Start-up

Allocation TypeSingle-year Grants
Research Field Civil and environmental engineering
Research InstitutionNational Institute of Public Health

Principal Investigator

KISHIDA Naohiro  国立保健医療科学院, 生活環境研究部, 主任研究官 (10533359)

Project Period (FY) 2009 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥2,678,000 (Direct Cost: ¥2,060,000、Indirect Cost: ¥618,000)
Fiscal Year 2010: ¥1,274,000 (Direct Cost: ¥980,000、Indirect Cost: ¥294,000)
Fiscal Year 2009: ¥1,404,000 (Direct Cost: ¥1,080,000、Indirect Cost: ¥324,000)
Keywords水資源 / 水循環 / 遺伝子 / 病原微生物 / クリプトスポリジウム / 土木環境システム / 微生物
Research Abstract

We describe an assay for simple and accurate quantification of pathogenic microorganisms in water samples using a recently developed quantification method named alternately binding probe competitive PCR(ABC-PCR). Cryptosporidium spp. were selected as representative pathogenic microorganisms in this study. The standard curve of the ABC-PCR assay had a good fitting to a rectangular hyperbola. Concentrations of Cryptosporidium oocysts in real river water samples were successfully quantified by the ABC-PCR assay. The quantified values by the ABC-PCR assay very closely resemble those by the real-time-PCR assay.

Report

(3 results)
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report
  • Research Products

    (8 results)

All 2012 2011 2010

All Journal Article (2 results) (of which Peer Reviewed: 2 results) Presentation (6 results)

  • [Journal Article] Quantitative detection of Cryptosporidium oocyst in water source based on 18S rRNA by alternately binding probe competitive reverse transcription polymerase chain reaction(ABC-RT-PCR)2012

    • Author(s)
      Kishida N., Miyata R., Furuta A., Izumiyama S., Tsuneda S., Sekiguchi S., Noda N. and Akiba M.
    • Journal Title

      Water Research

      Volume: Vol.46, No.1 Issue: 9 Pages: 187-194

    • DOI

      10.1016/j.watres.2012.03.010

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Quantitative detection of Cryptosporidium oocyst in water source based on 18S rRNA by alternately binding probe competitive reverse transcription polymerase chain reaction (ABC-RT-PCR)2012

    • Author(s)
      Kishida N., Miyata R., Furuta A., Izumiyama S., Tsuneda S., Sekiguchi S., Noda N., Akiba M.
    • Journal Title

      Water Research

      Volume: 46 Pages: 187-194

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Presentation] Quantitative detection of Cryptosporidium oocyst in water source by alternately binding probe competitive polymerase chain reaction2011

    • Author(s)
      Naohiro KISHIDA
    • Organizer
      The 16th International Symposium on Health-Related Water Microbiology
    • Place of Presentation
      Rotorua Energy Events Center(ニュージーランド)
    • Year and Date
      2011-09-20
    • Related Report
      2010 Annual Research Report
  • [Presentation] Quantitative detection of Cryptosporidium oocyst in water source by alternately binding probe competitive polymerase chain reaction(ABC-PCR)2011

    • Author(s)
      Kishida N., Miyata R., Furuta A., Izumiyama S., Morita S., Tsuneda S., Sekiguchi Y., Noda N., Akiba M.
    • Organizer
      The 16th International Symposium on Health-Related Water Microbiology
    • Place of Presentation
      Rotorua ; New Zeeland
    • Related Report
      2010 Final Research Report
  • [Presentation] 水道クリプトスポリジウム検査への遺伝子検査法導入に関する研究2010

    • Author(s)
      岸田直裕
    • Organizer
      第4回保健医療科学研究会
    • Place of Presentation
      国立保健医療科学院(埼玉県)
    • Year and Date
      2010-12-17
    • Related Report
      2010 Annual Research Report
  • [Presentation] 新規遺伝子定量手法ABC-PCR法を用いた水中の病原微生物の定量2010

    • Author(s)
      岸田直裕
    • Organizer
      第44回日本水環境学会年会
    • Place of Presentation
      福岡大学(福岡県)
    • Year and Date
      2010-03-15
    • Related Report
      2009 Annual Research Report
  • [Presentation] 新規遺伝子定量手法ABC-PCR法を用いた水中の病原微生物の定量2010

    • Author(s)
      岸田直裕,秋葉道宏,泉山信司,宮田亮,野田尚宏,関口勇地,古田篤史,常田聡
    • Organizer
      第44回日本水環境学会年会
    • Place of Presentation
      福岡
    • Related Report
      2010 Final Research Report
  • [Presentation] 水道クリプトスポリジウム検査への遺伝子検査法導入に関する研究2010

    • Author(s)
      岸田直裕,今野祥顕,秋葉道宏,猪又明子,泉山信司
    • Organizer
      第4回保健医療科学研究会
    • Place of Presentation
      和光
    • Related Report
      2010 Final Research Report

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Published: 2009-04-01   Modified: 2016-04-21  

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