Isolation and Evolutionary Ecological Analysis of the "Speciation Gene" of the genus Mitella
| Project/Area Number |
21870051
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| Research Category |
Grant-in-Aid for Research Activity Start-up
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| Allocation Type | Single-year Grants |
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| Research Field |
Evolutionary biology
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| Research Institution | National Museum of Nature and Science, Tokyo |
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Principal Investigator |
OKUYAMA Yudai National Museum of Nature and Science, Tokyo, 植物研究部, 研究員 (40522529)
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| Project Period (FY) |
2009 – 2010
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| Project Status |
Completed (Fiscal Year 2010)
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| Budget Amount *help |
¥2,756,000 (Direct Cost: ¥2,120,000、Indirect Cost: ¥636,000)
Fiscal Year 2010: ¥1,313,000 (Direct Cost: ¥1,010,000、Indirect Cost: ¥303,000)
Fiscal Year 2009: ¥1,443,000 (Direct Cost: ¥1,110,000、Indirect Cost: ¥333,000)
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| Keywords | 種分化 / SuperSAGE法 / トランスクリプトーム / 次世代DNAシーケンサー / 遺伝マーカー / 花香成分 / 遣伝マーカー |
|---|
| Research Abstract |
I conducted a transcriptome analysis of the scent-emitting flowers of 10 Asimitellaria species, which comprises the vast majority of the section, using SuperSAGE. I analyzed the obtained SuperSAGE tags using perl-baseed bioinformatics and succeeded the genome-wide comprehensive transcriptome comparisons among closely related plant species. Further analyses based on gene expression and sequence data revealed some candidate genes dominating pollination systems of Asimitellaria, which were thus likely to be the "speciation genes".
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Report
(3 results)
Research Products
(31 results)
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[Journal Article] A multi-faceted genomics approach allows the isolation of rice Pia-blast resistance gene consisting of two adjacent NBS-LRR protein genes.2011
Author(s)
Yudai Okuyama, Hiroyuki Kanzaki, Akira Abe, Kentaro Yoshida, Muluneh Tamiru, Hiromasa Saitoh, Takahiro Fujibe, Hideo Matsumura, Matt Shenton, Dominique Clark Galam, Jerwin Undan, Akiko Ito, Teruo Sone, Ryohei Terauchi
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Journal Title
The Plant Journal
Volume: 66
Pages: 467-479
Related Report
Peer Reviewed
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[Journal Article] A multi-faceted genomics approach allows the isolation of rice Pia-blast resistance gene consisting of two adjacent NBS-LRR protein genes.2010
Author(s)
Yudai Okuyama, Hiroyuki Kanzaki, Akira Abe, Kentaro Yoshida, Muluneh Tamiru, Hiromasa Saitoh, Takahiro Fujibe, Hideo Matsumura, Matt Shenton, Dominique Clark Galam, Jerwin Undan, Akiko Ito, Teruo Sone, Ryohei Terauchi
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Journal Title
The Plant Journal 66
Pages: 467-479
Related Report
Peer Reviewed
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[Journal Article] Arabidopsis Qa-SNARE SYP2 proteins localized to different subcellular regions function redundantly in vacuolar protein sorting and plant development.2010
Author(s)
Makoto Shirakawa, Haruko Ueda, Tomoo Shimada, Yasuko Koumoto, Takashi L., Shimada, Maki Kondo, Taku Takahashi, Yudai Okuyama, Mikio Nishimura, Ikuko Hara-Nishimura
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Journal Title
The Plant Journal 64
Pages: 924-935
NAID
Related Report
Peer Reviewed
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[Book] 日本の固有植物2011
Author(s)
加藤雅啓、海老原淳 編(共著)
Total Pages
503
Publisher
東海大学出版会
Related Report
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[Book] The Handbook of Plant Mutation Screening : Mining of Natural and Induced Alleles.Chapter 11.Use of TILLING for Reverse and Forward Genetics of Rice.2011
Author(s)
Sujay Rakshit, Hiroyuki Kanzaki, Hideo Matsumura, Arunita Rakshit, Takahiro Fujibe, Yudai Okuyama, Kentaro Yoshida, Muluneh Oli, Matt Shenton, Hiroe Utsushi, Chikako Mitsuoka, Akira Abe, Yutaka Kiuchi, Ryohei Terauchi
Publisher
Wiley-VCH Verlag GmbH & Co.KGaA, Weinheim, Germany.
Related Report
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[Book] The Handbook of Plant Mutation Screening : Mining of Natural and Induced Alleles. Chapter 11. Use of TILLING for Reverse and Forward Genetics of Rice.2010
Author(s)
Sujay Rakshit, Hiroyuki Kanzaki, Hideo Matsumura, Arunita Rakshit, Takahiro Fujibe, Yudai Okuyama, Kentaro Yoshida, Muluneh Oli, Matt Shenton, Hiroe Utsushi, Chikako Mitsuoka, Akira Abe, Yutaka Kiuchi, Ryohei Terauchi.
Total Pages
460
Publisher
Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim, Germany
Related Report
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