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Structure and function of IRGB6 and GBP, which lead the destruction of Toxoplasma gondii vacuole

Research Project

Project/Area Number 21K06988
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Review Section Basic Section 49040:Parasitology-related
Research InstitutionKobe University

Principal Investigator

Saijo-Hamano Yumiko  神戸大学, 医学研究科, 医学研究員 (00444513)

Project Period (FY) 2021-04-01 – 2024-03-31
Project Status Completed (Fiscal Year 2023)
Budget Amount *help
¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2023: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2022: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2021: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Keywordsトキソプラズマ / 寄生包膜 / Irgb6 / 結晶構造解析 / リン酸化 / 不活化 / X線結晶構造解析 / IRGB6 / GBP / クライオ電子顕微鏡解析
Outline of Research at the Start

病原性原虫の寄生胞膜破壊機構を原子レベルで解明するために、トキソプラズマ寄生胞膜の破壊を先導するIRGB6とGBPの高分解能分子構造を構造生物学的手法(X線結晶構造解析とクライオ電子顕微鏡構造解析)によって解明し、得られた分子構造からIRGB6とGBPによる寄生胞破壊時の反応機構を明らかにする。その成果は、病原性原虫に対する宿主の感染防御機構の解明を推進するのみならず、新たな原虫感染阻害薬の開発に繋がるものである。

Outline of Final Research Achievements

Irgb6 is recruited to and disrupts the PVM formed by Toxoplasma gondii. We have determined the crystal structures of the GTP-bound and nucleotide-free forms of mouse Irgb6. The membrane binding interface of Irgb6 has a unique conformation consisting of N- and C-terminal helical regions that form phospholipid binding sites. In silico phospholipid docking revealed the membrane-binding residues, which were validated by mutagenesis and cell-based assays. These data provide a new structural basis for Irgb6 recognition of T. gondii PVM.
We found that Thr95 of Irgb6 is phosphorylated in response to type II T. gondii infection and that the mutation disrupts its localisation to PVs. Structural analysis revealed that Irgb6-T95D leads to a conformational change in the G domain that allosterically alters the PV membrane-binding interface. In silico docking supported disruption of the PVM binding site. We provide new insights into the allosteric inactivation of Irgb6 induced by T. gondi.

Academic Significance and Societal Importance of the Research Achievements

Irgb6がトキソプラズマ寄生胞膜を認識する機構と(おそらくトキソプラズマによって)Irgb6が不活化される機構を共に分子レベルで解明し、免疫系を理解する上で重要な新しい知見を得られた。これらの研究結果は、寄生虫感染症に対して生体に本来備わる防御機構をうまく利用した新たな治療法の開発につながるものと期待する。

Report

(4 results)
  • 2023 Annual Research Report   Final Research Report ( PDF )
  • 2022 Research-status Report
  • 2021 Research-status Report
  • Research Products

    (2 results)

All 2024 2021

All Journal Article (2 results) (of which Peer Reviewed: 2 results,  Open Access: 2 results)

  • [Journal Article] Structural basis of Irgb6 inactivation by Toxoplasma gondii through the phosphorylation of switch I2024

    • Author(s)
      Okuma H, Saijo-Hamano Y, Yamada H, Sherif A.A, Hashizaki E, Sakai N, Kato T, Imasaki T, Kikkawa S, Nitta E, Sasai M, Abe T, Sugihara F, Maniwa Y, Kosako H, Takei K, Daron M. Standley, Yamamoto M, Nitta R
    • Journal Title

      Genes Cells.

      Volume: 29 Issue: 1 Pages: 17-38

    • DOI

      10.1111/gtc.13080

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Structural basis of membrane recognition of <i>Toxoplasma gondii</i> vacuole by Irgb62021

    • Author(s)
      Saijo-Hamano Yumiko、Sherif Aalaa Alrahman、Pradipta Ariel、Sasai Miwa、Sakai Naoki、Sakihama Yoshiaki、Yamamoto Masahiro、Standley Daron M、Nitta Ryo
    • Journal Title

      Life Science Alliance

      Volume: 5 Issue: 1 Pages: e202101149-e202101149

    • DOI

      10.26508/lsa.202101149

    • Related Report
      2021 Research-status Report
    • Peer Reviewed / Open Access

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Published: 2021-04-28   Modified: 2025-01-30  

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