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Mechanism on epigenetic carcinogenesis of EB virus-gastric cancer focused on senescence

Research Project

Project/Area Number 21K07934
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Review Section Basic Section 53010:Gastroenterology-related
Research InstitutionChiba University

Principal Investigator

SEKI Motoaki  千葉大学, 医学部附属病院, 特任助教 (70714278)

Project Period (FY) 2021-04-01 – 2024-03-31
Project Status Completed (Fiscal Year 2023)
Budget Amount *help
¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2023: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2022: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2021: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
KeywordsEBV胃癌 / DNAバーコード / EBウイルス / 胃癌 / ウイルス発癌 / EBウイルス胃癌 / 胃がん / 細胞老化 / DNAメチル化 / エピゲノム
Outline of Research at the Start

胃癌のサブグループであるEpstein-Barrウイルス陽性胃癌(EBV胃癌)は、EBウイルスへの感染と、それに続くDNAメチル化によって癌抑制遺伝子が不活性化され発癌に至る。しかし、上皮細胞へのウイルス感染から発癌至るエピゲノム制御は明らかではない。本研究では、EBウイルス感染細胞における表現型に基づいて分取し、EBウイルス感染時の遺伝子発現変化とエピゲノム変化を観察することで、発癌過程を包括的に理解する。得られた知見はエピゲノムに基づいた創薬や発癌リスク予測を行うための基盤となる。

Outline of Final Research Achievements

We searched the molecular mechanisms of gastric adenocarcinoma caused by EBV infection. After EBV infection, cellular senescence was not observed, but accumulation of specific subclones was observed by clone tracing with DNA barcodes. From single cell RNA-sequencing, the original cell population was found to consist of three sub clusters and one of which contained the subclones accumulated during EBV infection. We also determined marker genes which characterized this sub-population.

Academic Significance and Societal Importance of the Research Achievements

本研究から、均質に見える胃正常細胞においても不均一性が存在し、EBウイルスの感染・維持に有利な細胞集団の存在が示唆された。どの細胞がEBウイルスに感染するのかについてはこれまで不明であったが、そのマーカーとなりうる遺伝子を抽出できたことは発癌機構を明らかにする上で有益である。90%以上の成人がEBウイルスに感染しているとされるが、今後、易感染性細胞の性質を明らかにすることで、胃癌発症のリスクを抑える予防法の開発が進むと期待される。

Report

(4 results)
  • 2023 Annual Research Report   Final Research Report ( PDF )
  • 2022 Research-status Report
  • 2021 Research-status Report
  • Research Products

    (14 results)

All 2024 2023 2022 2021

All Journal Article (13 results) (of which Int'l Joint Research: 7 results,  Peer Reviewed: 12 results,  Open Access: 11 results) Book (1 results)

  • [Journal Article] Genome-Wide Analysis of DNA Methylation in Pseudomyxoma Peritonei Originated from Appendiceal Neoplasms2024

    • Author(s)
      Takane Kiyoko、Cai Tingwei、Noguchi Rei、Gohda Yoshimasa、Ikenoue Tsuneo、Yamaguchi Kiyoshi、Ota Yasunori、Kiyomatsu Tomomichi、Yano Hideaki、Fukuyo Masaki、Seki Motoaki、Bahityar Rahmutulla、Kaneda Atsushi、Furukawa Yoichi
    • Journal Title

      Oncology

      Volume: - Issue: 8 Pages: 1-12

    • DOI

      10.1159/000536219

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Enhancer infestation drives tumorigenic activation of inactive B compartment in Epstein-Barr virus-positive nasopharyngeal carcinoma2024

    • Author(s)
      Mizokami Harue、Okabe Atsushi、Choudhary Ruchi、Mima Masato、Saeda Kenta、Fukuyo Masaki、Rahmutulla Bahityar、Seki Motoaki、Goh Boon-Cher、Kondo Satoru、Dochi Hirotomo、Moriyama-Kita Makiko、Misawa Kiyoshi、Hanazawa Toyoyuki、Tan Patrick、Yoshizaki Tomokazu、Fullwood Melissa Jane、Kaneda Atsushi
    • Journal Title

      eBioMedicine

      Volume: 102 Pages: 105057-105057

    • DOI

      10.1016/j.ebiom.2024.105057

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Association of frequent hypermethylation with high grade histological subtype in lung adenocarcinoma2023

    • Author(s)
      Ito Yuki、Usui Genki、Seki Motoaki、Fukuyo Masaki、Matsusaka Keisuke、Hoshii Takayuki、Sata Yuki、Morimoto Junichi、Hata Atsushi、Nakajima Takahiro、Rahmutulla Bahityar、Kaiho Taisuke、Inage Terunaga、Tanaka Kazuhisa、Sakairi Yuichi、Suzuki Hidemi、Yoshino Ichiro、Kaneda Atsushi
    • Journal Title

      Cancer Science

      Volume: Online Issue: 7 Pages: 3003-3013

    • DOI

      10.1111/cas.15817

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Integrated environmental, lifestyle, and epigenetic risk prediction of primary gastric neoplasia using the longitudinally monitored cohorts2023

    • Author(s)
      Usui Genki, Matsusaka Keisuke, Huang Kie Kyon, Zhu Feng, Shinozaki Tomohiro, et al.
    • Journal Title

      eBioMedicine

      Volume: 98 Pages: 104844-104844

    • DOI

      10.1016/j.ebiom.2023.104844

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] A multi-kingdom genetic barcoding system for precise target clone isolation2023

    • Author(s)
      Ishiguro S、Ishida K、Sakata RC、Mori H、Takana M、King S、Bashth O、Ichiraku M、Masuyama N、Takimoto R、Kijima Y、Adel A、Toyoshima H、Seki M、Oh JH、Archambault AS、Nishida K、Kondo A、Kuhara S、Aburatani H、Klein GRI、Takashima Y、Shakiba N、Yachie N
    • Journal Title

      bioRxiv

      Volume: -

    • DOI

      10.1101/2023.01.18.524633

    • Related Report
      2022 Research-status Report
    • Open Access / Int'l Joint Research
  • [Journal Article] Association of tumors having <scp>Epstein?Barr</scp> virus in surrounding lymphocytes with poor prognosis2022

    • Author(s)
      Yogi Norikazu、Usui Genki、Matsusaka Keisuke、Fukuyo Masaki、Fujiki Ryoji、Seki Motoaki、Takano Shigetsugu、Abe Hiroyuki、Morikawa Teppei、Ushiku Tetsuo、Ohtsuka Masayuki、Kaneda Atsushi
    • Journal Title

      Cancer Medicine

      Volume: 12 Issue: 2 Pages: 1122-1136

    • DOI

      10.1002/cam4.4967

    • Related Report
      2022 Research-status Report
    • Peer Reviewed
  • [Journal Article] Virological characteristics of the SARS-CoV-2 Omicron BA.2 spike2022

    • Author(s)
      Yamasoba Daichi、Kimura Izumi、Nasser Hesham他
    • Journal Title

      Cell

      Volume: 未定 Issue: 12 Pages: 2103-2115

    • DOI

      10.1016/j.cell.2022.04.035

    • Related Report
      2022 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Cinobufagin inhibits proliferation of acute myeloid leukaemia cells by repressing c-Myc pathway-associated genes2022

    • Author(s)
      Hirasaki Yoshiro、Okabe Atsushi、Fukuyo Masaki、Rahmutulla Bahityar、Mano Yasunobu、Seki Motoaki、Hoshii Takayuki、Namiki Takao、Kaneda Atsushi
    • Journal Title

      Chemico-Biological Interactions

      Volume: 360 Pages: 109936-109936

    • DOI

      10.1016/j.cbi.2022.109936

    • Related Report
      2022 Research-status Report
    • Peer Reviewed
  • [Journal Article] Barcode fusion genetics-protein-fragment complementation assay (BFG-PCA): tools and resources that expand the potential for binary protein interaction discovery2022

    • Author(s)
      Evans-Yamamoto Daniel、Rouleau Francois D、Nanda Piyush、Makanae Koji、Liu Yin、Despres Philippe C、Matsuo Hitoshi、Seki Motoaki、Dube Alexandre K、Ascencio Diana、Yachie Nozomu、Landry Christian R
    • Journal Title

      Nucleic Acids Research

      Volume: gkac045 Issue: 9 Pages: 1-16

    • DOI

      10.1093/nar/gkac045

    • Related Report
      2021 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Neutralization of the SARS-CoV-2 Mu Variant by Convalescent and Vaccine Serum2021

    • Author(s)
      Uriu Keiya、Kimura Izumi、Shirakawa Kotaro、Takaori-Kondo Akifumi、Nakada Taka-aki、Kaneda Atsushi、Nakagawa So、Sato Kei
    • Journal Title

      New England Journal of Medicine

      Volume: 385 Issue: 25 Pages: 2397-2399

    • DOI

      10.1056/nejmc2114706

    • Related Report
      2021 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] CRISPR/Cas9-mediated base-editing enables a chain reaction through sequential repair of sgRNA scaffold mutations2021

    • Author(s)
      Fukushima, T., Tanaka, Y., Adachi, K., Masuyama, N., Tsuchiya, A., Asada, S., Ishiguro, S., Mori, H., Seki, M., Yachie, N., Goyama, S., Kitamura, T.
    • Journal Title

      Scientific Reports

      Volume: 11 Issue: 1

    • DOI

      10.1038/s41598-021-02986-6

    • Related Report
      2021 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Machine learning approach for discrimination of genotypes based on bright-field cellular images2021

    • Author(s)
      Suzuki Godai、Saito Yutaka、Seki Motoaki、Evans-Yamamoto Daniel、Negishi Mikiko、Kakoi Kentaro、Kawai Hiroki、Landry Christian R.、Yachie Nozomu、Mitsuyama Toutai
    • Journal Title

      npj Systems Biology and Applications

      Volume: 7 Issue: 1 Pages: 1-8

    • DOI

      10.1038/s41540-021-00190-w

    • Related Report
      2021 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] TET1 upregulation drives cancer cell growth through aberrant enhancer hydroxymethylation of HMGA2 in hepatocellular carcinoma.2021

    • Author(s)
      Shirai K, Nagae G, Seki M, Kudo Y, Kamio A, Hayashi A, Okabe A, Ota S, Tsutsumi S, Fujita T, Yamamoto S, Nakaki R, Kanki Y, Osawa T, Midorikawa Y, Tateishi K, Ichinose M, Aburatani H.
    • Journal Title

      Cancer Sci.

      Volume: 112 Issue: 7 Pages: 2855-2869

    • DOI

      10.1111/cas.14897

    • Related Report
      2021 Research-status Report
    • Peer Reviewed / Open Access
  • [Book] 超生物学―次のX2021

    • Author(s)
      谷内江 望、谷内江研究室
    • Total Pages
      189
    • Publisher
      羊土社
    • ISBN
      9784758122528
    • Related Report
      2021 Research-status Report

URL: 

Published: 2021-04-28   Modified: 2025-01-30  

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