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Cryopreservation of antifreeze protein multicellular systems based on X-ray nanoscale observations in vivo for ice crystals

Research Project

Project/Area Number 21K14466
Research Category

Grant-in-Aid for Early-Career Scientists

Allocation TypeMulti-year Fund
Review Section Basic Section 27040:Biofunction and bioprocess engineering-related
Research InstitutionIbaraki University

Principal Investigator

Kuramochi Masahiro  茨城大学, 理工学研究科(工学野), 助教 (60805810)

Project Period (FY) 2021-04-01 – 2023-03-31
Project Status Completed (Fiscal Year 2022)
Budget Amount *help
¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2022: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2021: ¥3,250,000 (Direct Cost: ¥2,500,000、Indirect Cost: ¥750,000)
Keywords不凍タンパク質 / 線虫 / 凍結保存 / 氷晶制御 / 熱ヒステリシス / 時分割X線計測 / 蛍光観察 / X線回折 / 氷晶形状
Outline of Research at the Start

モデル生物を使った実験から、AFPが多細胞生物体内においても氷晶成長抑制と細胞保護という2つの機能を発揮することがわかりました。本課題では、線虫体内という夾雑環境で形成される氷晶をX線ナノスケール観察し、氷晶形状、サイズ、成長速度に基づいたAFP氷晶制御法を構築します。また、細胞保護効果の蛍光イメージング解析を通して、細胞損傷の定量評価を行い、多細胞系に最適なAFP凍結保存技術を目指します。

Outline of Final Research Achievements

In the current study, I aimed to establish the most effective cryopreservation method for AFP. I verified AFP effectiveness and analysed the AFP-ice interaction by X-ray nanoscale measurement in vivo. I found that the survival rate of transgenic C. elegans expressing AFP at body wall muscles was significantly higher than that of the wld-type control animals. Next, X-ray nanoscale measurements were applied to monitor AFP-induced ice crystal regulation in vivo. Interestingly, I found that the molecular dynamics of the wild-type AFP and the loss-of-function AFP mutant behaved qualitatively differently at -5 and -10°C. These results indicate that the inhibition of ice crystal growth by AFP also acts as an important function in cryopreservation in vivo.

Academic Significance and Societal Importance of the Research Achievements

不凍タンパク質(Antifreeze Protein: AFP)は、氷晶成長を抑制するユニークな機能をもつ。本研究から、多細胞生物である線虫の凍結保存において、AFPが有効に働くことがわかった。その分子メカニズムとして、氷晶成長抑制という機能が動物体内でも発揮している様子をX線ナノスケール計測によって捉えることができた。これらの知見は、細胞や組織、臓器に至るさまざまな生体材料の凍結保存において、AFPが効果的に機能する可能性を示している。将来的に、臓器保存などを課題とする医療・医学分野での技術展開が期待できる。

Report

(3 results)
  • 2022 Annual Research Report   Final Research Report ( PDF )
  • 2021 Research-status Report
  • Research Products

    (31 results)

All 2023 2022 2021

All Journal Article (15 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 13 results,  Open Access: 12 results) Presentation (16 results) (of which Int'l Joint Research: 2 results,  Invited: 3 results)

  • [Journal Article] Observation of molecular motions in polymer thin films by laboratory grazing incidence diffracted X-ray blinking2023

    • Author(s)
      Inamasu Rena、Yamaguchi Hiroki、Arai Tatsuya、Chang Jaewon、Kuramochi Masahiro、Mio Kazuhiro、Sasaki Yuji C.
    • Journal Title

      Polymer Journal

      Volume: - Issue: 6 Pages: 703-709

    • DOI

      10.1038/s41428-023-00762-z

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] The effect of ice-binding proteins on the cryopreservation of Caenorhabditis elegans2023

    • Author(s)
      Kuramochi Masahiro、Arai Tatsuya、Mio Kazuhiro、Tsuda Sakae、Sasaki Yuji C.
    • Journal Title

      microPublication Biology

      Volume: -

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] 凍結低温環境下での生命活動維持を実現する氷晶結合タンパク質2023

    • Author(s)
      倉持昌弘、新井達也、三尾和弘、津田栄、佐々木裕次
    • Journal Title

      アグリバイオ

      Volume: 7 Pages: 74-79

    • Related Report
      2022 Annual Research Report
  • [Journal Article] Dynamic observations of various oligomers in amyloid β isoforms using laboratory diffracted X-ray blinking2022

    • Author(s)
      Chang Jaewon、Arai Tatsuya、Kuramochi Masahiro、Inamasu Rena、Lee Zhuoqi、Ohkubo Tatsunari、Mio Kazuhiro、Sasaki Yuji C.
    • Journal Title

      Biochemistry and Biophysics Reports

      Volume: 31 Pages: 101298-101298

    • DOI

      10.1016/j.bbrep.2022.101298

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] A mutation to a fish ice-binding protein synthesized in transgenic Caenorhabditis elegans modulates its cold tolerance2022

    • Author(s)
      Kuramochi Masahiro、Zhu Shumiao、Takanashi Chiaki、Yang Yue、Arai Tatsuya、Shinkai Yoichi、Doi Motomichi、Mio Kazuhiro、Tsuda Sakae、Sasaki Yuji C.
    • Journal Title

      Biochemical and Biophysical Research Communications

      Volume: 628 Pages: 98-103

    • DOI

      10.1016/j.bbrc.2022.08.073

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Visualizing Intramolecular Dynamics of Membrane Proteins2022

    • Author(s)
      Ohkubo Tatsunari、Shiina Takaaki、Kawaguchi Kayoko、Sasaki Daisuke、Inamasu Rena、Yang Yue、Li Zhuoqi、Taninaka Keizaburo、Sakaguchi Masaki、Fujimura Shoko、Sekiguchi Hiroshi、Kuramochi Masahiro、Arai Tatsuya、Tsuda Sakae、Sasaki Yuji C.、Mio Kazuhiro
    • Journal Title

      International Journal of Molecular Sciences

      Volume: 23 Issue: 23 Pages: 14539-14539

    • DOI

      10.3390/ijms232314539

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] 氷結合タンパク質は個体生物の凍結・非凍結低温環境における生存率を改善する2022

    • Author(s)
      倉持昌弘、新井達也、三尾和弘、津田栄、佐々木裕次
    • Journal Title

      アグリバイオ

      Volume: 6 Pages: 64-69

    • Related Report
      2022 Annual Research Report
  • [Journal Article] Dynamic motions of ice-binding proteins in living Caenorhabditis elegans using diffracted X-ray blinking and tracking2022

    • Author(s)
      Kuramochi Masahiro、Dong Yige、Yang Yue、Arai Tatsuya、Okada Rio、Shinkai Yoichi、Doi Motomichi、Aoyama Kouki、Sekiguchi Hiroshi、Mio Kazuhiro、Tsuda Sakae、Sasaki Yuji C.
    • Journal Title

      Biochemistry and Biophysics Reports

      Volume: 29 Pages: 101224-101224

    • DOI

      10.1016/j.bbrep.2022.101224

    • Related Report
      2021 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Diffracted X-ray Tracking Method for Measuring Intramolecular Dynamics of Membrane Proteins2022

    • Author(s)
      Fujimura Shoko、Mio Kazuhiro、Ohkubo Tatsunari、Arai Tatsuya、Kuramochi Masahiro、Sekiguchi Hiroshi、Sasaki Yuji C.
    • Journal Title

      International Journal of Molecular Sciences

      Volume: 23 Issue: 4 Pages: 2343-2343

    • DOI

      10.3390/ijms23042343

    • Related Report
      2021 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Superelasticity of a photo-actuating chiral salicylideneamine crystal2022

    • Author(s)
      Taniguchi Takuya、Ishizaki Kazuki、Takagi Daisuke、Nishimura Kazuki、Shigemune Hiroki、Kuramochi Masahiro、Sasaki Yuji C.、Koshima Hideko、Asahi Toru
    • Journal Title

      Communications Chemistry

      Volume: 5 Issue: 1 Pages: 4-4

    • DOI

      10.1038/s42004-021-00618-8

    • Related Report
      2021 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] New Family Members of FG Repeat Proteins and Their Unexplored Roles During Phase Separation2021

    • Author(s)
      Shinkai Yoichi、Kuramochi Masahiro、Miyafusa Takamitsu
    • Journal Title

      Frontiers in Cell and Developmental Biology

      Volume: 9

    • DOI

      10.3389/fcell.2021.708702

    • Related Report
      2021 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Laboratory diffracted x-ray blinking to monitor picometer motions of protein molecules and application to crystalline materials2021

    • Author(s)
      Arai Tatsuya、Inamasu Rena、Yamaguchi Hiroki、Sasaki Daisuke、Sato-Tomita Ayana、Sekiguchi Hiroshi、Mio Kazuhiro、Tsuda Sakae、Kuramochi Masahiro、Sasaki Yuji C.
    • Journal Title

      Structural Dynamics

      Volume: 8 Issue: 4 Pages: 044302-044302

    • DOI

      10.1063/4.0000112

    • Related Report
      2021 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Living-Cell Diffracted X-ray Tracking Analysis Confirmed Internal Salt Bridge Is Critical for Ligand-Induced Twisting Motion of Serotonin Receptors2021

    • Author(s)
      Mio Kazuhiro、Fujimura Shoko、Ishihara Masaki、Kuramochi Masahiro、Sekiguchi Hiroshi、Kubo Tai、Sasaki Yuji C.
    • Journal Title

      International Journal of Molecular Sciences

      Volume: 22 Issue: 10 Pages: 5285-5285

    • DOI

      10.3390/ijms22105285

    • Related Report
      2021 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Structural basis for the coiled-coil architecture of human CtIP2021

    • Author(s)
      Morton C. R.、Rzechorzek N. J.、Maman J. D.、Kuramochi M.、Sekiguchi H.、Rambo R.、Sasaki Y. C.、Davies O. R.、Pellegrini L.
    • Journal Title

      Open Biology

      Volume: 11 Issue: 6 Pages: 210060-210060

    • DOI

      10.1098/rsob.210060

    • Related Report
      2021 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] X線1分子追跡法を用いたTRPイオンチャネル運動の高速時分割計測と制御機構の理解2021

    • Author(s)
      三尾和弘、藤村章子、倉持昌弘、関口博史、佐々木裕次
    • Journal Title

      日本放射光学会誌

      Volume: 34 Pages: 258-266

    • NAID

      40022720878

    • Related Report
      2021 Research-status Report
    • Peer Reviewed
  • [Presentation] Twisting Motions of Different Ligand-bound States of nAChR α7 Monitored by Diffracted X-ray Tracking2023

    • Author(s)
      楊 越、新井 達也、佐々木 大輔、倉持 昌弘、関口 博史、三尾 和弘、 久保 泰、佐々木 裕次
    • Organizer
      日本放射光学会
    • Related Report
      2022 Annual Research Report
  • [Presentation] 機械学習を用いたX線動画解析による動態物性の抽出2023

    • Author(s)
      倉持昌弘、李卓起、赤穂昭太郎、佐々木裕次
    • Organizer
      2022年度量子ビームサイエンスフェスタ
    • Related Report
      2022 Annual Research Report
  • [Presentation] "Functional analysis in vivo of ice-binding proteins based on their dynamic behaviour. 氷結合タンパク質の動的挙動に基づいた生体内機能解析"2022

    • Author(s)
      倉持 昌弘
    • Organizer
      日本蛋白質学会PSSJ2022
    • Related Report
      2022 Annual Research Report
  • [Presentation] Expression of Ice-Binding Proteins in Caenorhabditis elegans Improves the Survival Rate after freezing and cold shock.2022

    • Author(s)
      M. Kuramochi
    • Organizer
      IBP conference
    • Related Report
      2022 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 不凍タンパク質の凍結保存効果と水和構造に起因した氷結合メカニズム2022

    • Author(s)
      下谷祐平、倉持昌弘
    • Organizer
      線虫研究の未来を創る会
    • Related Report
      2022 Annual Research Report
  • [Presentation] テラヘルツ光照射による線虫初期胚の非熱効果検証2022

    • Author(s)
      栗山稜平、倉持昌弘
    • Organizer
      線虫研究の未来を創る会
    • Related Report
      2022 Annual Research Report
  • [Presentation] サンゴ由来蛍光結晶化遺伝子Xpa 導入による線虫体内での結晶形成2022

    • Author(s)
      菅原生蕗、倉持昌弘
    • Organizer
      線虫研究の未来を創る会
    • Related Report
      2022 Annual Research Report
  • [Presentation] 味覚神経ASE を介したAIY 神経の活動制御2022

    • Author(s)
      倉持昌弘、山口一輝
    • Organizer
      線虫研究の未来を創る会
    • Related Report
      2022 Annual Research Report
  • [Presentation] Mechanism of in-cell protein crystallization with supersaturated environment and its application2022

    • Author(s)
      倉持昌弘
    • Organizer
      分子夾雑の生命化学 成果とりまとめ公開シンポジウム
    • Related Report
      2022 Annual Research Report
  • [Presentation] X 線 1 分子追跡法によるイベルメクチン存在下での nAChR α7 の逆回転運動の測定2022

    • Author(s)
      Yue Yang、Tatsuya Arai、Daisuke Sasaki、Masahiro Kuramochi、Hiroshi Sekiguchi、Kazuhiro Mio、Tai Kubo、Yuji C. Sasaki
    • Organizer
      第60回日本生物物理学会
    • Related Report
      2022 Annual Research Report
  • [Presentation] Dynamical Measurement of Material Characteristics using Diffracted X-ray Blinking2022

    • Author(s)
      M. Kuramochi
    • Organizer
      ICPAC KK 2022
    • Related Report
      2022 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] X線ブリンキング法による動態物性取得と機能相関 生体内分子、高分子、ソフトクリスタルまで2022

    • Author(s)
      倉持昌弘、三尾和弘、佐々木裕次
    • Organizer
      2022年度OPERANDO-OIL・COMS・量子ビーム計測クラブ合同研究会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 氷結合タンパク質を発現した線虫の凍結保存効果 Cryopreservation effects of C. elegans expressing ice-binding proteins2022

    • Author(s)
      下谷祐平、新井達也、三尾和弘、津田栄、佐々木裕次、倉持昌弘
    • Organizer
      日本分子生物学会
    • Related Report
      2022 Annual Research Report
  • [Presentation] Mechanism of in-cell protein crystallization with supersaturated environment and its application2021

    • Author(s)
      倉持昌弘
    • Organizer
      線虫研究の未来を創る会
    • Related Report
      2021 Research-status Report
  • [Presentation] Cryopreservation of C. elegans by ice-binding protein2021

    • Author(s)
      下谷祐平、倉持昌弘
    • Organizer
      線虫研究の未来を創る会
    • Related Report
      2021 Research-status Report
  • [Presentation] X線ブリンキング法による生物個体内の結晶化タンパク質および分子夾雑場観察2021

    • Author(s)
      倉持昌弘
    • Organizer
      3新学術領域合同シンポジウム
    • Related Report
      2021 Research-status Report
    • Invited

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Published: 2021-04-28   Modified: 2024-01-30  

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