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Characteristics of three cytosolic glutamine synthetases and two NADH-glutamate synthase in ammonium assimilation and nitrogen utilization rice

Research Project

Project/Area Number 22248005
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field Plant nutrition/Soil science
Research InstitutionTohoku University

Principal Investigator

YAMAYA Tomoyuki  東北大学, (連合)農学研究科(研究院), 教授 (30144778)

Project Period (FY) 2010-04-01 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥45,240,000 (Direct Cost: ¥34,800,000、Indirect Cost: ¥10,440,000)
Fiscal Year 2013: ¥8,840,000 (Direct Cost: ¥6,800,000、Indirect Cost: ¥2,040,000)
Fiscal Year 2012: ¥10,660,000 (Direct Cost: ¥8,200,000、Indirect Cost: ¥2,460,000)
Fiscal Year 2011: ¥10,660,000 (Direct Cost: ¥8,200,000、Indirect Cost: ¥2,460,000)
Fiscal Year 2010: ¥15,080,000 (Direct Cost: ¥11,600,000、Indirect Cost: ¥3,480,000)
Keywordsイネ / 窒素利用 / グルタミン代謝 / 逆遺伝学 / メタボローム / アンモニア同化 / 窒素利用機構 / グルタミン合成酵素 / グルタミン酸合成酵素 / 遺伝子破壊変異体 / 代謝
Research Abstract

Reverse genetics and spatial expression of genes encoding the three isoenzymes of cytosolic glutamine synthetase (GS1;1, GS1;2, and GS1;3) and two NADH-glutamatesynthases (NADH-GOGAT1 and NADH-GOGAT2) were characterized in rice. OsGS1;2 and OsNADH-GOGAT1 are important in the primary assimilation of ammonium taken up by rice roots. On the other hand, GS1;1 and NADH-GOGAT2 could be important in remobilization of nitrogen during natural senescence. Metabolite profiling data showed a crucial role of GS1;1 in coordinating metabolic balance in rice. Expression of OsGS1:3 was spikelet-specific, indicating that it is probably important in grain ripening and/or germination. Thus, these isoenzymes seem to possess distinct and non-overlapping functions and none was able to compensate for the individual function of another.

Report

(5 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Annual Research Report
  • 2011 Annual Research Report
  • 2010 Annual Research Report
  • Research Products

    (45 results)

All 2014 2013 2012 2011 2010 Other

All Journal Article (11 results) (of which Peer Reviewed: 11 results) Presentation (27 results) (of which Invited: 6 results) Book (1 results) Remarks (6 results)

  • [Journal Article] Evidences supporting distinct functions of three cytosolic glutamine synthetases and two NADH-glutamate synthases in rice2014

    • Author(s)
      Yamaya, T. and Kusano M.
    • Journal Title

      Journal of Experimental Botany

      Volume: (in press)

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] NADH-dependent glutamate synthase plays a crucial role in assimilating ammonium in Arabidopsis root2014

    • Author(s)
      Konishi, N., Ishiyama, K., Matsuoka, K., Maru, I., Hayakawa, T., Yamaya, T. and Kojima, S.
    • Journal Title

      Physiologia Plantarum

      Volume: (in press)

    • NAID

      120005691730

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Cytosolic glutamine synthetase1 ; 2 is responsible for the primary assimilation of ammonium in rice roots2013

    • Author(s)
      Funayama, K.^$, Kojima, S.^$, Tabuchi-Kobayashi, M., Sawa, Y., Nakayama, Y., Hayakawa, T. and Yamaya, T
    • Journal Title

      Plant and Cell Physiology (selected a highlight paper)

      Volume: 54(6) Pages: 934-943

    • NAID

      10031184135

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Cytosolic glutamine synthetase1;2 is responsible for the primary assimilation of ammonium in rice roots2013

    • Author(s)
      Funayama, K.$, Kojima, S.$, Tabuchi-Kobayashi, M., Sawa, Y., Nakayama, Y., Hayakawa, T. and Yamaya, T.
    • Journal Title

      Plant and Cell Physiology

      Volume: 54 Issue: 6 Pages: 934-943

    • DOI

      10.1093/pcp/pct046

    • NAID

      10031184135

    • Related Report
      2013 Annual Research Report 2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Deciphering starch quality of rice kernels using metabolite profiling and pedigree network analysis2012

    • Author(s)
      Kusano, M.
    • Journal Title

      Molecular Plant

      Volume: 5 Issue: 2 Pages: 442-451

    • DOI

      10.1093/mp/ssr101

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Dissection of genotype-phenotype associations in rice grains using metabolome quantitative trait loci analysis2012

    • Author(s)
      Matsuda, M.
    • Journal Title

      Plant Journal

      Volume: 70 Issue: 4 Pages: 624-636

    • DOI

      10.1111/j.1365-313x.2012.04903.x

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Metabolomics data reveal a crucial role of cytosolic glutamine synthetase 1 ; 1 in coordinating metabolic balance in rice2011

    • Author(s)
      Kusano, M., Tabuchi, M., Fukushima, A., Funayama, K., Diaz, C., Kobayashi, M., Hayashi, N., Tsuchiya N. Y., Takahashi, H., Kamata, A., Yamaya, T., and Saito, K
    • Journal Title

      Plant Journal

      Volume: 66 Pages: 456-466

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Disruption of a novel NADH-glutamate synthase2 gene caused marked reduction in spike let number of rice2011

    • Author(s)
      田村亘, 小島創一, 豊川絢子, 渡邉英生, 田淵-小林真由美, 早川俊彦, 山谷知行
    • Journal Title

      Frontiers in Plant Science

      Volume: vol.2 Pages: 57-57

    • DOI

      10.3389/fpls.2011.00057

    • Related Report
      2013 Final Research Report 2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Metabolomics data reveal a crucial role of cytosolic glutamine synthetasel;1 in coordinating metabolic balance in rice2011

    • Author(s)
      Kusano, et al
    • Journal Title

      The Plant Journal

      Volume: 66 Issue: 3 Pages: 456-466

    • DOI

      10.1111/j.1365-313x.2011.04506.x

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Metabolomics data reveal a crucial role of cytosolic glutamine synthetasel ; 1 in coordinating metabolic balance in rice2011

    • Author(s)
      Kusano, et al
    • Journal Title

      The Plant Journal

      Volume: (未定)(印刷中)

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Reverse genetic approach to characterize a function of NADH-glutamate synthasel in rice plants2010

    • Author(s)
      Tamura, et al
    • Journal Title

      Amino Acids

      Volume: 39 Pages: 1003-1012

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Presentation] イネ維管束ネットワーク上のショ糖転流と顆粒成長モデル2014

    • Author(s)
      佐竹暁子,関元秀,Francois Feugier,池田真由子,北野英己,Xian-Jun Song,芦苅基行,中村巴瑠花,石山敬貴,山谷知行
    • Organizer
      第55回日本植物生理学会年会シンポジウム「環境変動に対する植物の生存成長戦略:総合研究の新展開」
    • Place of Presentation
      富山大学
    • Year and Date
      2014-03-20
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] イネ根におけるアンモニウム態窒素吸収の負の制御の新理解2014

    • Author(s)
      早川俊彦、山谷知行
    • Organizer
      第55回日本植物生理学会年会シンポジウム「植物の三大栄養素(N-P-K)の感知と利用の新理解」
    • Place of Presentation
      富山大学
    • Year and Date
      2014-03-18
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] シロイヌナズナは2 つの低親和型グルタミン合成酵素を使い分けて根でアンモニウムを同化する2014

    • Author(s)
      小西範幸,石山敬貴,丸郁美,松岡香矢,早川俊彦,山谷知行,小島創一
    • Organizer
      第55回日本植物生理学会年会
    • Place of Presentation
      富山大学
    • Related Report
      2013 Final Research Report
  • [Presentation] Strigolactone-independent reduction of tiller number in rice mutant lacking cytosolic glutamine synthetase1 ; 2 or NADH-glutamate synthase12014

    • Author(s)
      Ohashi, M., Ishiyama, K., Hanada, A., Kojima, S., Hayakawa, T., Seto, Y., Yamaguch, Y., Yamaya, T.
    • Organizer
      第55回日本植物生理学会年会
    • Place of Presentation
      富山大学
    • Related Report
      2013 Final Research Report
  • [Presentation] The proper use of glutamine produced by cytosolic GS1 ; 1 is critical for metabolic and organelle homeostasis in rice2014

    • Author(s)
      Kusano, M., Fukushima, A., Funayama, K., Tabuchi-Kobayashi, M., Nishizawa, T., Kobayashi, M., Wakazaki, M., Sato, M., Toyooka, M., Osanai-Kondo, K., Utsumi, Y., Seki, S., Kojima, S., Saito, S., Yamaya, T.
    • Organizer
      第55回日本植物生理学会年会
    • Place of Presentation
      富山大学
    • Related Report
      2013 Final Research Report
  • [Presentation] イネ維管束ネットワーク上のショ糖転流と顆粒成長モデル2014

    • Author(s)
      佐竹暁子,関元秀,Francois Feugier,池田真由子,北野英己,Xian-Jun Song,芦苅基行,中村巴瑠花,石山敬貴,山谷知行
    • Organizer
      第55回日本植物生理学会年会シンポジウム
    • Place of Presentation
      富山大学
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] イネ根におけるアンモニウム態窒素吸収の負の制御の新理解2014

    • Author(s)
      早川俊彦、山谷知行
    • Organizer
      第55回日本植物生理学会年会シンポジウム
    • Place of Presentation
      富山大学
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Strigolactone-independent reduction of tiller number in rice mutant lacking cytosolic glutamine synthetase1;2 or NADH-glutamate synthase12014

    • Author(s)
      Miwa Ohashi1,Keiki Ishiyama,Atsushi Hanada,Soichi Kojima,Toshihiko Hayakawa,Yoshiya Seto,Shinjiro Yamaguchi,Tomoyuki Yamaya
    • Organizer
      第55回日本植物生理学会年会
    • Place of Presentation
      富山大学
    • Related Report
      2013 Annual Research Report
  • [Presentation] Distinct function of GS1 and NADH-GOGAT isoenzymes in rice2013

    • Author(s)
      Yamaya, T.
    • Organizer
      Second International Symposium on the Nitrogen Nutrition of Plants
    • Place of Presentation
      Puerto Varas, Chile
    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Invited
  • [Presentation] The study of two cytosolic glutamine synthetase isoforms of rice using reverse genetic, metabolite and transcript profiling approaches and microscopic analysis2013

    • Author(s)
      Kusano, M., Fukushima, A., Funayama, K., Tabuchi-Kobayashi, M., Nishizawa, T., Kobayashi, M., Waakazaki, M., Sato, M., Toyooka, K., Osanai-Kondo, K., Utsumi, Y., Seki, M., Kojima, S., Yamaya, T., Saito, K.
    • Organizer
      Second International Symposium on the Nitrogen Nutrition of Plants
    • Place of Presentation
      Puerto Varas, Chile
    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Invited
  • [Presentation] Rice novel protein kinase involved in regulation of ammonium uptake into roots under high concentration of external ammonium2013

    • Author(s)
      Hayakawa, T., Obara, M., Taniai, A., Sawa, Y., Ishizawa, J., Kojima, S., Yamaya, T.
    • Organizer
      Second International Symposium on the Nitrogen Nutrition of Plants
    • Place of Presentation
      Puerto Varas, Chile
    • Related Report
      2013 Final Research Report
  • [Presentation] シロイヌナズナサイトゾル型グルタミン合成酵素は根でアンモニウムによって誘導されアンモニウムを同化する2013

    • Author(s)
      小西範幸、早川俊彦、山谷知行、小島創一
    • Organizer
      日本農芸化学会2013年度大会
    • Place of Presentation
      東北大学
    • Related Report
      2013 Final Research Report
  • [Presentation] シロイヌナズナNADH グルタミン酸合成酵素の根におけるアンモニウム同化の重要性2013

    • Author(s)
      小西範幸、松岡香矢、丸郁美、早川俊彦、山谷知行、小島創一
    • Organizer
      第54回日本植物生理学会年会
    • Place of Presentation
      岡山大学
    • Related Report
      2013 Final Research Report
  • [Presentation] シロイヌナズナ環境型におけるアンモニウム栄養利用の遺伝的な差異2013

    • Author(s)
      松岡香矢、佐々木和弘、大岩優喜、丸郁美、早川俊彦、佐藤雅志、山谷知行、小島創一
    • Organizer
      第54回日本植物生理学会年会
    • Place of Presentation
      岡山大学
    • Related Report
      2013 Final Research Report
  • [Presentation] シロイヌナズナNADHグルタミン酸合成酵素の根におけるアンモニウム同化の重要性2013

    • Author(s)
      小西範幸 (山谷知行)
    • Organizer
      第54回日本植物生理学会年会
    • Place of Presentation
      岡山 (岡山大学)
    • Related Report
      2012 Annual Research Report
  • [Presentation] シロイヌナズナ環境型におけるアンモニウム栄養利用の遺伝的な差異2013

    • Author(s)
      松岡香矢 (山谷知行)
    • Organizer
      第54回日本植物生理学会年会
    • Place of Presentation
      岡山 (岡山大学)
    • Related Report
      2012 Annual Research Report
  • [Presentation] シロイヌナズナサイトゾル型グルタミン合成酵素は根でアンモニウムによって誘導されアンモニウムを同化する2013

    • Author(s)
      小西範幸 (山谷知行)
    • Organizer
      日本農芸化学会2013年度大会
    • Place of Presentation
      仙台 (東北大学)
    • Related Report
      2012 Annual Research Report
  • [Presentation] ご挨拶・PCP表紙コンテスト授賞式(PCP編集長)2012

    • Author(s)
      山谷知行
    • Organizer
      第53回日本植物生理学会年会
    • Place of Presentation
      京都産業大学
    • Year and Date
      2012-03-18
    • Related Report
      2011 Annual Research Report
  • [Presentation] Evidence to support a function of glutamine synthetase1 ; 2 in the primary assimilation of ammonium ions in rice roots2012

    • Author(s)
      Funayama, K., Tabuchi-Kobayashi, M., Sawa, Y., Kojima, S., Hayakawa, T. and Yamaya, T.
    • Organizer
      第53回日本植物生理学会年会
    • Place of Presentation
      京都産業大学
    • Related Report
      2013 Final Research Report
  • [Presentation] イネ根における新規プロテインキナーゼ(OsACTPK1)のアンモニウム吸収抑制への関与2012

    • Author(s)
      谷合彰子、澤勇己、小原実広、吉成晃、小島創一、山谷知行、早川俊彦
    • Organizer
      第53回日本植物生理学会年会
    • Place of Presentation
      京都産業大学
    • Related Report
      2013 Final Research Report
  • [Presentation] 酵母スプリットユビキチン法によるアンモニウム輸送担体と細胞質型グルタミン合成酵素の相互作用の解析2012

    • Author(s)
      松岡香矢、大岩優喜、早川俊彦、山谷知行、小島創一
    • Organizer
      第53回日本植物生理学会年会
    • Place of Presentation
      京都産業大学
    • Related Report
      2013 Final Research Report
  • [Presentation] Identification and characterization of qRL6.1, a major QTL for root length of seedlings hydroponically grown in rice2011

    • Author(s)
      Obara, M., Fukuta, Y., Sato, T., Yano, M., Yamaya, T.
    • Organizer
      The 7^<th> Asian Crop Science Association Conference
    • Place of Presentation
      Bogor, Indonesia
    • Year and Date
      2011-09-28
    • Related Report
      2013 Final Research Report
  • [Presentation] Oryza glaberrina の挿入置換系統群を用いた、イネ根長のQTL 検出と検証2011

    • Author(s)
      小原実広、福田善通、早川俊彦、山谷知行
    • Organizer
      日本土壌肥料学会2011年度つくば大会
    • Place of Presentation
      エポカルつくば
    • Year and Date
      2011-08-09
    • Related Report
      2013 Final Research Report
  • [Presentation] Reduction of the primary assimilation of ammnonium ions and panicle number in rice mutants lacking cytosolic glutamine synthetase1 ; 22011

    • Author(s)
      Funayama, K., Tabuchi-Kobayashi, M., Yawa, Y., Kojima, S., Hayakawa, T., Yamaya, T.
    • Organizer
      International Symposium "Strategies of Plants against Global Environmental Change"
    • Place of Presentation
      Kurashiki, Okayama, Japan (poster)
    • Related Report
      2013 Final Research Report
  • [Presentation] Interplay between ammonium transporter and glutamine synthethase in Arabidopsis2011

    • Author(s)
      Tanaka-Matsuoka, T., Oiwa, Y., Hayakawa, T., Yamaya, T., Kojima, S.
    • Organizer
      International Symposium "Strategies of Plants against Global Environmental Change"
    • Place of Presentation
      Kurashiki, Okayama, Japan (poster)
    • Related Report
      2013 Final Research Report
  • [Presentation] 硫酸イオントランスポーターSULTR2 ; 1 の根における硫黄欠乏応答における3'非転写領域の役割2011

    • Author(s)
      丸山明子、井上恵理、高橋晶子、斉藤和季、山谷知行、高橋秀樹
    • Organizer
      日本土壌肥料学会2011年度つくば大会
    • Related Report
      2013 Final Research Report
  • [Presentation] Opening Remarks (as a Chief Organizer)2010

    • Author(s)
      Yamaya, T.
    • Organizer
      The 1st International Symposium on the Nitrogen Nutrition of Plants
    • Place of Presentation
      Inuyama, Japan
    • Related Report
      2010 Annual Research Report
  • [Book] Nitrogen Assimnation in Plants2010

    • Author(s)
      Kojima, et al
    • Publisher
      Research Signpost
    • Related Report
      2010 Annual Research Report
  • [Remarks]

    • URL

      http://www.agri.tohoku.ac.jp/cellbio/index-j.htm

    • Related Report
      2013 Final Research Report
  • [Remarks] 植物細胞生物学分野

    • URL

      http://www.agri.tohoku.ac.jp/cellbio/index-j.htm

    • Related Report
      2013 Annual Research Report
  • [Remarks] 植物細胞生物学分野

    • URL

      http://www.agri.tohoku.ac.jp/cellbio/index-j.htm

    • Related Report
      2012 Annual Research Report
  • [Remarks]

    • URL

      http://www.agri.tohoku.ac.jp/cellbio/index-j.htm

    • Related Report
      2011 Annual Research Report
  • [Remarks]

    • URL

      http://www.agri.tohoku.ac.jp/agri-field/025.html

    • Related Report
      2010 Annual Research Report
  • [Remarks]

    • URL

      http://www.agri.tohoku.ac.jp/cellbio/index-j.htm

    • Related Report
      2010 Annual Research Report

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Published: 2010-08-23   Modified: 2019-07-29  

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