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The mechanism of the molecular clock that controls developmental dynamics

Research Project

Project/Area Number 22310126
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field System genome science
Research InstitutionNara Institute of Science and Technology

Principal Investigator

BESSHO Yasumasa  奈良先端科学技術大学院大学, バイオサイエンス研究科, 教授 (70261253)

Co-Investigator(Kenkyū-buntansha) MATSUI Takaaki  奈良先端科学技術大学院大学, バイオサイエンス研究科, 助教 (60403333)
NAKAHATA Yasukazu  奈良先端科学技術大学院大学, バイオサイエンス研究科, 助教 (50390810)
Co-Investigator(Renkei-kenkyūsha) SAKUMURA Yuichi  愛知県立大学, 情報科学部, 准教授 (50324968)
Project Period (FY) 2010 – 2012
Project Status Completed (Fiscal Year 2012)
Budget Amount *help
¥20,410,000 (Direct Cost: ¥15,700,000、Indirect Cost: ¥4,710,000)
Fiscal Year 2012: ¥6,370,000 (Direct Cost: ¥4,900,000、Indirect Cost: ¥1,470,000)
Fiscal Year 2011: ¥6,370,000 (Direct Cost: ¥4,900,000、Indirect Cost: ¥1,470,000)
Fiscal Year 2010: ¥7,670,000 (Direct Cost: ¥5,900,000、Indirect Cost: ¥1,770,000)
Keywords発生 / 体節 / 形態形成 / 振動 / ロバスト性 / Notch シグナル / 生物時計 / 分節化 / 転写因子 / Notch / 時間制御 / マウス / FGF / 濃度勾配
Research Abstract

The aim of this study is to understand the mechanism of dynamics in somite formation in vertebrate development and uncover the principle of pattern formation by using temporal periodicity. During somite formation, the expression of several genes oscillate in the presomitic mesoderm, thereby controlling the cyclic somite segmentation. Here, we demonstrate that the period of the oscillatory gene expression and somite segmentation is fine-tuned by the strength of Notch signaling. Moreover, we show a modulator molecule of Notch signaling is essential for the robustness of the oscillatory gene expression.

Report

(4 results)
  • 2012 Annual Research Report   Final Research Report ( PDF )
  • 2011 Annual Research Report
  • 2010 Annual Research Report
  • Research Products

    (26 results)

All 2013 2012 2011 Other

All Journal Article (9 results) (of which Peer Reviewed: 8 results) Presentation (17 results) (of which Invited: 2 results)

  • [Journal Article] Hyperpolarisationactivated cyclic nucleotide-gated channels regulate the spontaneous firing rate of olfactory receptor neurons and affect glomerular formation in mice.2013

    • Author(s)
      Nakashima N, Ishii TM, Bessho Y, Kageyama R & Ohmori H
    • Journal Title

      J Physiology

      Volume: 591 Issue: 7 Pages: 1749-1769

    • DOI

      10.1113/jphysiol.2012.247361

    • Related Report
      2012 Annual Research Report 2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Sassone-Corsi P.Pharmacological modulation of circadian rhythms by synthetic activators of the deacetylase SIRT12013

    • Author(s)
      Bellet MM, Nakahata Y, Boudjelal M,Watts E, Mossakowska DE, Edwards KA,Cervantes M, Astarita G, Loh C, Ellis JL,Vlasuk GP
    • Journal Title

      Proc. Natl. Acad. Sci.USA

      Volume: 110 Issue: 9 Pages: 3333-3338

    • DOI

      10.1073/pnas.1214266110

    • Related Report
      2012 Annual Research Report 2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Celf1 regulation of dmrt2a is required for somite symmetry and left-right patterning during zebrafish development2012

    • Author(s)
      Matsui T, Sasaki A, Akazawa N, Otani H,and U
    • Journal Title

      Development

      Volume: 139 Issue: 19 Pages: 3553-3560

    • DOI

      10.1242/dev.077263

    • Related Report
      2012 Annual Research Report 2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Left-right asymmetry in zebrafish2012

    • Author(s)
      Matsui T, and Bessho Y
    • Journal Title

      Cellular and Molecular Life Sciences

      Volume: 69 Issue: 18 Pages: 3069-3077

    • DOI

      10.1007/s00018-012-0985-6

    • Related Report
      2012 Annual Research Report 2012 Final Research Report 2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Canopy1 を介したFGF シグナルの活性制御機構2012

    • Author(s)
      松井貴輝、岡本 仁、別所康全
    • Journal Title

      細胞工学

      Volume: 31 Pages: 416-420

    • Related Report
      2012 Final Research Report
  • [Journal Article] The period of the somite segmentation clock is sensitive to Notch activity2011

    • Author(s)
      W.Kim, et al
    • Journal Title

      Mol.Biol.Cell

      Volume: 22 Issue: 18 Pages: 3541-3549

    • DOI

      10.1091/mbc.e11-02-0139

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Canopy1, a positive feedback regulator of FGF signaling, controls progenitor cell clustering during Kupffer's vesicle organogenesis2011

    • Author(s)
      Matsui T, Thitamadee S, Murata T,Kakinuma H, Nabetani T, Hirabayashi Y,Hirate Y, Okamoto H, and Bessho Y
    • Journal Title

      Proc. Natl. Acad. Sci. USA

      Volume: 108 Issue: 24 Pages: 9881-9886

    • DOI

      10.1073/pnas.1017248108

    • NAID

      120005716658

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] The period of the somite segmentation clock is sensitive to Notch activity.2011

    • Author(s)
      Kim, W. et al.
    • Journal Title

      Mol. Biol. Cell

      Volume: 22 Pages: 3541-3549

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Canopy1, a positive feedback regulator of FGF signaling, controls progenitor cell clustering during Kupffer's vesicle organogenesis.2011

    • Author(s)
      Matsui, T. et al.
    • Journal Title

      Proc. Natl. Acad. Sci. U. S. A.

      Volume: 108 Pages: 9881-9886

    • NAID

      120005716658

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Presentation] Celf1 regulation of dmrt2a is required for somite symmetry and left-right patterning during zebrafish development2012

    • Author(s)
      Matsui T, Sasaki A, Akazawa N, Otani H,and Bessho Y
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡市
    • Year and Date
      2012-12-11
    • Related Report
      2012 Final Research Report
  • [Presentation] マウス発生過程 における、vivo-Morpholino を用いた遺伝子ノックダウン法の確立2012

    • Author(s)
      森本佳世子、別所康全、松井貴輝
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡市
    • Year and Date
      2012-12-11
    • Related Report
      2012 Final Research Report
  • [Presentation] A possible mechanism which adjusts differences between anterior- and posterior-somitogenesis in zebrafish2012

    • Author(s)
      Retnoaji B, Akiyama R, Matta T, Bessho Y, and Matsui T
    • Organizer
      第18回小型魚類研究会
    • Place of Presentation
      京都市
    • Year and Date
      2012-09-22
    • Related Report
      2012 Final Research Report
  • [Presentation] Cell clustering required for proper organogenesis2012

    • Author(s)
      Matta T, TaharaN, Kakinuma H, Hirate Y, Okamoto H, Bessho Y, Sakumura Y, and Matsui T
    • Organizer
      第18回小型魚類研究会
    • Place of Presentation
      京都市
    • Year and Date
      2012-09-22
    • Related Report
      2012 Final Research Report
  • [Presentation] 2012形づくりを制御する2 時間周期の生物時計2012

    • Author(s)
      別所康全
    • Organizer
      生物リズム若手研究者の集い2012
    • Place of Presentation
      つくば市
    • Year and Date
      2012-08-04
    • Related Report
      2012 Final Research Report
  • [Presentation] ゼブラフィッシュの左右非対称性を規定するクッペル胞の形成メカニズム2012

    • Author(s)
      松井貴輝, 岡本仁, 別所康全
    • Organizer
      第153回日本獣医学会学術集会
    • Place of Presentation
      埼玉県
    • Year and Date
      2012-03-27
    • Related Report
      2012 Final Research Report
  • [Presentation] クッペル胞の発生をモデルとした細胞集団形成メカニズムの解析2011

    • Author(s)
      松井 貴輝
    • Organizer
      第11回関西小型魚類研究会
    • Place of Presentation
      奈良県
    • Year and Date
      2011-09-30
    • Related Report
      2012 Final Research Report
  • [Presentation] Cugbp1 regulation of dmrt2a is required to generate proper somite symmetry and left-right patterning during zebrafish development2011

    • Author(s)
      Matsui T, Sasaki A, Akazawa N, Otani H,and Bessho Y
    • Organizer
      第17回小型魚類研究会
    • Place of Presentation
      三島市
    • Year and Date
      2011-09-08
    • Related Report
      2012 Final Research Report
  • [Presentation] Integration of segmentation clock and FGF signaling generates segmental pattern of somite2011

    • Author(s)
      Akiyama R, Matsui T, Masuda M, and Bessho Y
    • Organizer
      第17回小型魚類研究会
    • Place of Presentation
      三島市
    • Year and Date
      2011-09-08
    • Related Report
      2012 Final Research Report
  • [Presentation] Cell clustering mechanism for organogenesis in zebrafish2011

    • Author(s)
      Matsuta T, Tahara M, Sumino E,Kakinuma H, Hirate Y, Okamoto H,Bessho Y, Sakumura Y, Matsui T
    • Organizer
      第17回小型魚類研究会
    • Place of Presentation
      三島市
    • Year and Date
      2011-09-08
    • Related Report
      2012 Final Research Report
  • [Presentation] The mechanism of the biological clock that controls animal development2011

    • Author(s)
      Bessho, Y
    • Organizer
      HUS-UET-NAIST Symposium
    • Place of Presentation
      Hanoi, Vietnam
    • Year and Date
      2011-03-02
    • Related Report
      2010 Annual Research Report
  • [Presentation] 形づくりを制御する2 時間周期の生物時計

    • Author(s)
      別所康全
    • Organizer
      生物リズム若手研究者の集い2012
    • Place of Presentation
      茨城県つくば市
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] Celf1 regulation of dmrt2a is required for somite symmetry and left-right patterning during zebrafish development

    • Author(s)
      Natsui Takaaki
    • Organizer
      第35回 日本分子生物学会年会
    • Place of Presentation
      福岡県福岡市
    • Related Report
      2012 Annual Research Report
  • [Presentation] マウス発生過程 における、vivo-Morpholinoを用いた遺伝子ノックダウン法の確立

    • Author(s)
      森本佳世子
    • Organizer
      第35回 日本分子生物学会年会
    • Place of Presentation
      福岡県福岡市
    • Related Report
      2012 Annual Research Report
  • [Presentation] A possible mechanism which adjusts differences between anterior- and posterior-somitogenesis in zebrafish

    • Author(s)
      Bambang Retnoaji
    • Organizer
      第18回 小型魚類研究会
    • Place of Presentation
      京都府京都市
    • Related Report
      2012 Annual Research Report
  • [Presentation] Cell clustering required for proper organogenesis

    • Author(s)
      Tatsuro Matta
    • Organizer
      第18回 小型魚類研究会
    • Place of Presentation
      京都府京都市
    • Related Report
      2012 Annual Research Report
  • [Presentation] The mechanism of the biological clock that controls animal development

    • Author(s)
      Bessho. Y.
    • Organizer
      ICBS BIO-UGM 2011
    • Place of Presentation
      Yogyakarta Indonesia
    • Related Report
      2011 Annual Research Report
    • Invited

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Published: 2010-08-23   Modified: 2019-07-29  

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