Development of mutant population via insertion of novel transposable elements in soybean
Project/Area Number |
22380002
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Research Category |
Grant-in-Aid for Scientific Research (B)
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Allocation Type | Single-year Grants |
Section | 一般 |
Research Field |
Breeding science
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Research Institution | Hokkaido University |
Principal Investigator |
KANAZAWA Akira 北海道大学, 大学院・農学研究院, 准教授 (30281794)
|
Co-Investigator(Kenkyū-buntansha) |
ABE Jun 北海道大学, 大学院・農学研究院, 教授 (00192998)
|
Project Period (FY) |
2010 – 2012
|
Project Status |
Completed (Fiscal Year 2012)
|
Budget Amount *help |
¥18,980,000 (Direct Cost: ¥14,600,000、Indirect Cost: ¥4,380,000)
Fiscal Year 2012: ¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2011: ¥7,020,000 (Direct Cost: ¥5,400,000、Indirect Cost: ¥1,620,000)
Fiscal Year 2010: ¥8,190,000 (Direct Cost: ¥6,300,000、Indirect Cost: ¥1,890,000)
|
Keywords | ダイズ / 突然変異 / トランスポゾン / 転移活性 / エピジェネティクス |
Research Abstract |
In terms of exploiting the potential use of SORE-1, a novel retrotransposon in soybean, as a mutagen to produce mutant population, transcriptional and transpositional control of the element was analyzed. Distribution of SORE-1 in the soybean genome, the presence of promoter activity to control transcription in the terminal repeats, and the presence of the environmental and developmental control of SORE-1 transcription were revealed. In addition, evidence that SORE-1 transposed during recent varietal differentiation of soybean, which resulted in polymorphisms in terms of the presence orabsence of gene disruption in a soybean population derived from a single plant line, was obtained.
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Report
(4 results)
Research Products
(66 results)
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[Journal Article] Deep sequencing uncovers commonality in small RNA profiles between transgene-induced and naturally occurring RNA silencing of chalcone synthase-A gene in petunia2013
Author(s)
Kasai, M., Matsumura, H., Yoshida, K., Terauchi, R., Taneda, A. and Kanazawa, A
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Journal Title
BMC Genomics
Volume: 14
Pages: 63-63
NAID
Related Report
Peer Reviewed
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[Journal Article] Complex genetic nature of sex-independent transmission ratio distortion in Asian rice species: the involvement of unlinkedmodifiers and sex-specific mechanisms2012
Author(s)
Koide, Y., Shinya, Y., Ikenaga, M., Sawamura, N., Matsubara, K., Onishi, K., Kanazawa, A. and Sano, Y
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Journal Title
Heredity
Volume: 108
Issue: 3
Pages: 242-247
DOI
Related Report
Peer Reviewed
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[Journal Article] Coincident sequence-specific RNA degradation of linked transgenes in the plant genome2012
Author(s)
Kasai, M., Koseki, M., Goto, K., Masuta, C., Ishii, S., Hellens, R. P., Taneda, A. and Kanazawa, A
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Journal Title
PlantMol. Biol
Volume: 78
Issue: 3
Pages: 259-273
DOI
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Peer Reviewed
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[Journal Article] Virus-mediated efficient induction of epigenetic modifications of endogenous genes with phenotypic changes in plants2011
Author(s)
Kanazawa, A., Inaba, J., Shimura, H., Otagaki, S., Tsukahara, S., Matsuzawa, A., Kim, B. M., Goto, K. and Masuta, C.
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Journal Title
Plant J
Volume: 65
Issue: 1
Pages: 156-168
DOI
NAID
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Peer Reviewed
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[Journal Article] Establishment of an in vitro culture and particle bombardment-mediated transformation system in Miscanthus sinensis Anderss., a potential bioenergy crop2011
Author(s)
Wang, X., Yamada, T., Kong, F., Abe, Y., Hoshino, Y., Sato, H., Takamizo, T., Kanazawa, A. and Yamada, T.(2011)
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Journal Title
Global Change Biology Bioenergy
Volume: 3
Issue: 4
Pages: 322-332
DOI
Related Report
Peer Reviewed
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[Journal Article] Optimization of ion-beam irradiation for mutagenesis in soybean: effects on plant growth and production of visibly altered mutants2011
Author(s)
Arase, S., Hase, Y., Abe, J., Kasai, M., Yamada, T., Kitamura, K., Narumi, I., Tanaka, A. and Kanazawa, A
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Journal Title
Plant Biotechnology
Volume: 28
Issue: 3
Pages: 323-329
DOI
NAID
ISSN
1342-4580, 1347-6114
Related Report
Peer Reviewed
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[Journal Article] Soybean stem growth habit gene Dt1 is an orthologue of Arabidopsis TFL12010
Author(s)
Liu, B., Watanabe, S., Uchimiya, T., Kong, F., Kanazawa, A., Xia, Z., Nagamatsu, A., Arai, M., Yamada, T., Kitamura, K., Masuta, C., Harada, K. and Abe, J
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Journal Title
Plant Physiol
Volume: 153
Issue: 1
Pages: 198-210
DOI
Related Report
Peer Reviewed
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[Journal Article] Two coordinately regulated homologs of FLOWERING LOCUS T are involved in the control of photoperiodic flowering in soybean2010
Author(s)
Kong, F., Liu, B., Xia, Z., Sato, S., Kim, B., Watanabe, S., Yamada, T., Tabata, S., Kanazawa, A., Harada, K. and Abe, J
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Journal Title
Plant Physiol
Volume: 154
Issue: 3
Pages: 1220-1231
DOI
Related Report
Peer Reviewed
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[Presentation] Transcription and transposition of the soybean retrotransposon SORE-12012
Author(s)
Tsuchiya, M., Yuan, H., Sato, M., Kasai, M., Abe, J. and Kanazawa, A
Organizer
10th International Congress on Plant Molecular Biology
Place of Presentation
Republic of Korea
Year and Date
2012-10-24
Related Report
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[Presentation] RNA-mediated epigenetic modifications by a viral vector: a potent system to produce a plant that does not carry a transgene but has altered traits2012
Author(s)
Kanazawa, A., Inaba, J., Kasai, M., Shimura,H. and Masuta, C
Organizer
10th International Congress on Plant Molecular Biology
Place of Presentation
ICC, Jeju, Republic of Korea.
Year and Date
2012-10-24
Related Report
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[Presentation] RNA-mediated epigenetic modifications of an endogenous gene as a tool to produce a plant that does not carry a transgene but has altered traits2011
Author(s)
Kanazawa, A., Inaba, J., Kasai, M., Shimura, H. and Masuta, C
Organizer
SOL&ICuGI2011 8th Solanaceae and 2nd CucurbitaceaeGenome Joint Conference
Place of Presentation
Kobe ConventionCenter, Kobe, Japan
Year and Date
2011-12-01
Related Report
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[Presentation] The inheritable transcriptional gene silencing targeted to an endogenous ene silencing targeted to an endogenous gene in petunia by using the Cucumber mosaic virus vector2011
Author(s)
Inaba, J., Kanazawa, A., Shimura, H., Otagaki, S., Tsukahara, S., Matsuzawa, A., Kim, B., Goto, K. and Masuta, C.
Organizer
Keystone Symposia on Molecular and Cellular Biology
Place of Presentation
Portola Hotel & Spa, Monterey, California, USA
Year and Date
2011-03-22
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