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Genomics of a diamondback moth and contribution to clarify the insecticide resistance mechanism

Research Project

Project/Area Number 22380041
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Applied entomology
Research InstitutionNational Institute of Agrobiological Sciences

Principal Investigator

YAMAMOTO Kimiko  独立行政法人農業生物資源研究所, 昆虫ゲノム研究ユニット, ユニット長 (40370689)

Co-Investigator(Kenkyū-buntansha) MIYAMOTO Kazuhisa  農業生物資源研究所, 昆虫微生物機能研究ユニット, 上級研究員 (10370686)
JOURAKU Akiya  農業生物資源研究所, 昆虫ゲノム研究ユニット, 任期付研究員 (60542115)
SUETUGU Yoshitaka  農業生物資源研究所, 昆虫ゲノム研究ユニット, 主任研究員 (80533471)
NODA Hiroaki  農業生物資源研究所, 昆虫科学研究領域, 特任上級研究員 (40343991)
MITA Kazuei  農業生物資源研究所, 昆虫科学研究領域, 恃任上級研究員 (30159165)
Project Period (FY) 2010 – 2012
Project Status Completed (Fiscal Year 2012)
Budget Amount *help
¥18,980,000 (Direct Cost: ¥14,600,000、Indirect Cost: ¥4,380,000)
Fiscal Year 2012: ¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Fiscal Year 2011: ¥7,150,000 (Direct Cost: ¥5,500,000、Indirect Cost: ¥1,650,000)
Fiscal Year 2010: ¥8,190,000 (Direct Cost: ¥6,300,000、Indirect Cost: ¥1,890,000)
Keywords昆虫分子生物学 / コナガゲノム / Bt菌毒素抵抗性 / コナガ / cDNA / ゲノム / Bt抵抗性
Research Abstract

EST analysis and RNAseq were performed and more than 30,000 gene candidates were acquired. KONAGAbase that provides diamondback moth comprehensive transcriptomic and draft genomic sequences with useful annotation information was developed and opened to the public. The candidates of Bt toxin resistance related genes were found with genetic analysis. The result of gene expression profiling showed that the genes associated with medicine metabolism had the low relevance with Bt toxin resistance.

Report

(4 results)
  • 2012 Annual Research Report   Final Research Report ( PDF )
  • 2011 Annual Research Report
  • 2010 Annual Research Report
  • Research Products

    (18 results)

All 2013 2012 2011 2010 Other

All Journal Article (2 results) (of which Peer Reviewed: 1 results) Presentation (14 results) Remarks (2 results)

  • [Journal Article] チョウ目害虫におけるBT剤およびBt毒素抵抗性の現状と原因遺伝子の同定2013

    • Author(s)
      宮本和久、渥美省吾、山本公子、瀬筒秀樹、野田博明
    • Journal Title

      植物防疫

      Volume: 67(1) Pages: 27-34

    • NAID

      40019543574

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] チョウ目害虫におけるBT剤およびBt毒素抵抗性の現状と原因遺伝子の同定2013

    • Author(s)
      宮本和久
    • Journal Title

      植物防疫

      Volume: 67 Pages: 27-34

    • NAID

      40019543574

    • Related Report
      2012 Annual Research Report
  • [Presentation] The development of the genomic database of the diamondback moth (Plutella xylostella) and genomic analysis using it 6th Annual Arthropod Genomics Symposium: Arthropod Genomics2013

    • Author(s)
      Jouraku A, Yamamoto K, Kuwazaki S, Urio M, Suetsugu Y, Narukawa J, Miyamoto K, Kurita K, Kanamori H, Katayose Y, Matsumoto T, Noda H
    • Organizer
      Taking Center Stage and i5k Community Workshop
    • Place of Presentation
      Kansas City, USA
    • Year and Date
      2013-06-01
    • Related Report
      2012 Final Research Report
  • [Presentation] KONAGAbase:agenomic database of the diamondback moth2012

    • Author(s)
      Jouraku A, Yamamoto K, Kuwazaki S, Urio M, Suetsugu Y, Narukawa J, Miyamoto K, Kurita K, Kanamori H, Katayose Y, Matsumoto T,Noda H
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡
    • Year and Date
      2012-12-12
    • Related Report
      2012 Final Research Report
  • [Presentation] 殺虫剤抵抗性問題の最前線2012

    • Author(s)
      上樂明也
    • Organizer
      殺虫剤抵抗性問題におけるゲノム情報基盤の活用シンポジウム「ポストゲノム時代の害虫防除研究のあり方第5回」
    • Place of Presentation
      秋葉原
    • Year and Date
      2012-11-15
    • Related Report
      2012 Final Research Report
  • [Presentation] Genome analysis of agricultural pests 2:Development of a genomic database of the diamondback moth and its application to genome analysis2011

    • Author(s)
      Jouraku A, Yamamoto K, Kuwazaki S, Urio M, Suetsugu Y, Narukawa J, Miyamoto K, Kurita K, Kanamori H, Katayose Y, Matsumoto T,Noda H
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Year and Date
      2011-12-14
    • Related Report
      2012 Final Research Report
  • [Presentation] Genome analysis of agricultural pests 2 : Development of a genomic database of the diamondback moth and its application to genome analysis2011

    • Author(s)
      Jouraku A, Yamamoto K, Kuwazaki S, Urio M, Suetsugu Y, Narukawa J, Miyamoto K, Kurita K, Kanamori H, Katayose Y, Matsumoto T, Noda H
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(神奈川)
    • Year and Date
      2011-12-14
    • Related Report
      2011 Annual Research Report
  • [Presentation] Current status of the development of the diamondback moth database2011

    • Author(s)
      Jouraku A, Yamamoto K, Kuwazaki S, Urio M, Suetsugu Y, Narukawa J, Miyamoto K, Kurita K, Kanamori H, Katayose Y, Matsumoto T, Noda H
    • Organizer
      Sixth International Symposium on Molecular lnsect Science
    • Place of Presentation
      アムステルダム、オランダ
    • Year and Date
      2011-10-04
    • Related Report
      2012 Final Research Report
  • [Presentation] Current status of the development of the diamondback moth database2011

    • Author(s)
      Jouraku A, Yamamoto K, Kuwazaki S, Urio M, Suetsugu Y, Narukawa J, Miyamoto K, Kurita K, Kanamori H, Katayose Y, Matsumoto T, Noda H
    • Organizer
      Sixth International Symposium on Molecular Insect Science
    • Place of Presentation
      NH Grand Krasnapolsky(アムステルダム オランダ)
    • Year and Date
      2011-10-04
    • Related Report
      2011 Annual Research Report
  • [Presentation] 農業害虫ゲノム解析-1.コナガゲノム塩基配列および発現遺伝子解析2010

    • Author(s)
      山本公子,上樂明也,桑崎誠剛,瓜尾政博,末次克行,生川潤子,宮本和久,野田博明
    • Organizer
      第33回日本分子生物学会年会・第83回日本生化学会大会合同大会
    • Place of Presentation
      神戸
    • Year and Date
      2010-12-09
    • Related Report
      2012 Final Research Report
  • [Presentation] Development of a genomic database of the diamondback moth2010

    • Author(s)
      Jouraku A, Yamamoto K, Kuwazaki S, Urio M, Suetsugu Y, Narukawa J, Miyamoto K, Noda H
    • Organizer
      第33回日本分子生物学会年会・第83回日本生化学会大会 合同大会
    • Place of Presentation
      神戸
    • Year and Date
      2010-12-09
    • Related Report
      2010 Annual Research Report
  • [Presentation] Development of a genomic database of the diamondback moth2010

    • Author(s)
      Jouraku A, Yamamoto K, Kuwazaki S, Urio M, Suetsugu Y, Narukawa J, Miyamoto K, Noda H
    • Organizer
      第33回日本分子生物学会年会・第83回日本生化学会大会合同大会
    • Place of Presentation
      神戸
    • Year and Date
      2010-12-08
    • Related Report
      2012 Final Research Report
  • [Presentation] 農業害虫ゲノム解析-1.コナガゲノム塩基配列および発現遺伝子解析2010

    • Author(s)
      山本公子, 上樂明也, 桑崎誠剛, 瓜尾政博, 末次克行, 生川潤子, 宮本和久, 野田博明
    • Organizer
      第33回日本分子生物学会年会・第83回日本生化学会大会 合同大会
    • Place of Presentation
      神戸
    • Year and Date
      2010-12-08
    • Related Report
      2010 Annual Research Report
  • [Presentation] KONAGAbase: a genomic database of the diamondback moth

    • Author(s)
      上樂明也
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      マリンメッセ福岡
    • Related Report
      2012 Annual Research Report
  • [Presentation] 殺虫剤抵抗性問題におけるゲノム情報基盤の活用

    • Author(s)
      上樂明也
    • Organizer
      NIASシンポジウム「ポストゲノム時代の害虫防除研究のあり方 第5回」-殺虫剤抵抗性問題の最前線
    • Place of Presentation
      秋葉原コンベンションホール
    • Related Report
      2012 Annual Research Report
  • [Presentation] The development of the genomic database of the diamondback moth (Plutella xylostella) and genomic analysis using it.

    • Author(s)
      上樂明也
    • Organizer
      6th Annual Arthropod Genomics Symposium: Arthropod Genomics 2012
    • Place of Presentation
      Kansas City, USA
    • Related Report
      2012 Annual Research Report
  • [Remarks]

    • Related Report
      2012 Final Research Report
  • [Remarks] KONAGAbase

    • URL

      http://dbm.dna.affrc.go.jp/px/

    • Related Report
      2012 Annual Research Report

URL: 

Published: 2010-08-23   Modified: 2019-07-29  

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