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Characterization and modification of molecular mechanism for transcriptional regulation of the degradation enzyme system of an environmental pollutant

Research Project

Project/Area Number 22380050
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Applied microbiology
Research InstitutionNagaoka University of Technology

Principal Investigator

FUKUDA Masao  長岡技術科学大学, 工学部, 教授 (20134512)

Co-Investigator(Kenkyū-buntansha) KASAI Daisuke  長岡技術科学大学, 工学部, 助教 (80452085)
Project Period (FY) 2010 – 2012
Project Status Completed (Fiscal Year 2012)
Budget Amount *help
¥17,940,000 (Direct Cost: ¥13,800,000、Indirect Cost: ¥4,140,000)
Fiscal Year 2012: ¥5,330,000 (Direct Cost: ¥4,100,000、Indirect Cost: ¥1,230,000)
Fiscal Year 2011: ¥5,330,000 (Direct Cost: ¥4,100,000、Indirect Cost: ¥1,230,000)
Fiscal Year 2010: ¥7,280,000 (Direct Cost: ¥5,600,000、Indirect Cost: ¥1,680,000)
Keywords環境微生物 / 転写制御機構 / 二成分制御系 / PCB / Rhodococcus / ビフェニル
Research Abstract

Rhodococcus jostii RHA1 is a strong degrader of the environmental pollutant, polychlorinated biphenyls (PCBs). Induction of its degradation enzymes requires an inducing substrate and is conducted by a couple of two-component transcriptional regulators, BphS1T1 and BphS2T2. Mechanism of transcriptional regulation of BphS1T1 and BphS2T2 were examined to develop a strain whose PCB-degradation enzymes are induced by PCBs themselves. Phosphorylation of BphT (BphT1/T2) in the presence of the inducing substrate was indicated. A novel 24-bp consensus sequence was shared among the degradation enzyme gene operon promoters and had necessary and sufficient function for transcriptional induction by BphST, suggesting that the 24-bp sequence serves the binding site for the transcriptional complex including BphT.

Report

(4 results)
  • 2012 Annual Research Report   Final Research Report ( PDF )
  • 2011 Annual Research Report
  • 2010 Annual Research Report
  • Research Products

    (20 results)

All 2013 2012 2011 2010 Other

All Journal Article (5 results) (of which Peer Reviewed: 5 results) Presentation (12 results) (of which Invited: 2 results) Remarks (3 results)

  • [Journal Article] Gene cluster and regulation system for 1,1-dichloro-2,2-bis(4-chlorophenyl)ethyl ene (DDE) degradation in Janibacter sp. TYM32212013

    • Author(s)
      P.A.T. Nguyen, T.H.T. Trinh, Y. Fukumitsu, J. Shimodaira, K. Miyauchi, M. Tokuda, D. Kasai, E. Masai, M. Fukuda
    • Journal Title

      J. Biosci. Bioeng

      Volume: Vol.116, No.1 Issue: 1 Pages: 91-100

    • DOI

      10.1016/j.jbiosc.2013.01.007

    • NAID

      110009634751

    • Related Report
      2012 Annual Research Report 2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] The 24-bp consensus sequence responsible for regulation of the BphS1T1 two-component system in a hybrid promoter2012

    • Author(s)
      J. Shimodaira, Y. Furusawa, Y. Miyazawa, D. Kasai, K. Miyauchi, E. Masai, M. Fukuda
    • Journal Title

      J. Biosci. Bioeng

      Volume: Vol.113 No. 3 Issue: 3 Pages: 279-285

    • DOI

      10.1016/j.jbiosc.2011.10.021

    • NAID

      110009425316

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] The 24-bp consensus sequence responsible for regulation of the BphS1T1 two-component system in a hybrid promoter2012

    • Author(s)
      Shimodaira J, Furusawa Y, Kasai D, Miyauchi K, Masai E, Fukuda M
    • Journal Title

      J.Biosci.Bioeng.

      Volume: 113 Pages: 279-285

    • NAID

      110009425316

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Dual two-component regulatory systems are involved in aromatic compound degradation in a polychlorinated-biphenyl degrader2010

    • Author(s)
      H. Takeda, J. Shimodaira, K. Yukawa, N. Hara, D. Kasai, K. Miyauchi, E. Masai, M.
    • Journal Title

      Rhodococcus jostii RHA1, J. Bacteriol.

      Volume: Vol.192, No.18 Issue: 18 Pages: 4741-4751

    • DOI

      10.1128/jb.00429-10

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Dual two-component regulatory systems are involved in aromatic compound degradation in a polychlorinated-biphenyl degrader, Rhodococcus jostii RHA1.2010

    • Author(s)
      Takeda H, Shimodaira J, Yukawa K, Hara N, Kasai D, Miyauchi K, Masai E, Fukuda M.
    • Journal Title

      J. Bacteriol.

      Volume: 192 Pages: 4741-4751

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Presentation] Development of a PCB degrading microorganism2012

    • Author(s)
      M. Fukuda
    • Organizer
      15th International Biotechnology Symposium and Exhibition (IBS 2012)
    • Place of Presentation
      Daegu (Korea)
    • Year and Date
      2012-09-18
    • Related Report
      2012 Final Research Report
  • [Presentation] Induction mechanism of biphenyl/PCB-degradation pathway in a Rhodococcus degrader2012

    • Author(s)
      M. Fukuda, J. Shimodaira, K. Miyauchi, H. Takeda, D. Kasai, E. Masai
    • Organizer
      Environmental Microbiology and Biotechnology in the frame of the Knowledge-Based Bio and Green Economy (EMB2012)
    • Place of Presentation
      Bologna(Italy)
    • Year and Date
      2012-04-10
    • Related Report
      2012 Final Research Report
  • [Presentation] Development of a PCB degrading microorganism.2012

    • Author(s)
      福田雅夫
    • Organizer
      The 15th International Biotechnology Symposium
    • Place of Presentation
      大邱EXCO(韓国)
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] Rhodococcus jostii RHA1 の BphST 二成分制御系による転写誘導メカニズムの解明2012

    • Author(s)
      下平潤
    • Organizer
      環境バイオテクノロジー学会2012年度大会
    • Place of Presentation
      京都大学宇治キャンパス(京都府宇治市)
    • Related Report
      2012 Annual Research Report
  • [Presentation] Induction mechanism of biphenyl/PCB-degradation pathway in a Rhodococcus degrader.2012

    • Author(s)
      福田雅夫
    • Organizer
      Environmental Microbiology & Biotechnology 2012 (EMB2012)
    • Place of Presentation
      ボローニャ大学(イタリア)
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] The essential sequence for transcriptional regulation of biphenyl/polychlorinated biphenyls-degradation gene promoters in Rhodococcus jostii RHA12011

    • Author(s)
      Shimodaira J, Miyazawa Y, Furusawa Y, Takeda H, Kasai D, Miyauchi K, Masai E, Fukuda M
    • Organizer
      International Union of Microbiological Societies 2011 Congress
    • Place of Presentation
      札幌
    • Year and Date
      2011-09-08
    • Related Report
      2011 Annual Research Report
  • [Presentation] The essential sequence for transcriptional regulation of biphenyl/ polychlorinated biphenyls-degradation gene promoters in Rhodococcus jostii RHA12011

    • Author(s)
      J. Shimodaira, Y. Miyazawa, Y. Furusawa, H. Takeda, D. Kasai, K. Miyauchi, E. Masai, M. Fukuda
    • Organizer
      International Union of Microbiological Societies (IUMS 2011)
    • Place of Presentation
      札幌
    • Year and Date
      2011-09-06
    • Related Report
      2012 Final Research Report
  • [Presentation] Characterization of 1,1-dichloro-2,2- bis(4-chlorophenyl) ethylene (DDE) degradation enzyme system in the strain Janibacter sp. TYM32212011

    • Author(s)
      P.A.T. Nguyen, Y. Sato, T. Iwasaki, K. Miyauchi, D. Kasai, E. Masai, M. Fukuda
    • Organizer
      International Union of Microbiological Societies (IUMS2011)
    • Place of Presentation
      札幌
    • Year and Date
      2011-09-06
    • Related Report
      2012 Final Research Report
  • [Presentation] Regulatory mechanism of biphenyl/PCB-degradation gene transcription in Rhodococcus jostii RHA12010

    • Author(s)
      Shimodaira J, Miyauchi K, Takeda H, Kasai D, Masai E, Fukuda M.
    • Organizer
      14th International Biotechnology Symposium and Exhibition
    • Place of Presentation
      Rimini(イタリア)
    • Year and Date
      2010-09-16
    • Related Report
      2010 Annual Research Report
  • [Presentation] Regulatory mechanism of biphenyl/PCB-degradation gene transcription in Rhodococcus jostii RHA12010

    • Author(s)
      J. Shimodaira, Y. Miyazawa, Y. Furusawa, H. Takeda, D. Kasai, K. Miyauchi, E. Masai,M. Fukuda
    • Organizer
      14th International Biotechnology Symposium and Exhibition (IBS 2010)
    • Place of Presentation
      Rimini (Italy)
    • Year and Date
      2010-09-14
    • Related Report
      2012 Final Research Report
  • [Presentation] PCB分解菌の育種2010

    • Author(s)
      福田雅夫
    • Organizer
      公開シンポジウム「環境保全と健常生活のための先端バイオテクノロジー」
    • Place of Presentation
      東北学院大学工学部(宮城県多賀城市)
    • Year and Date
      2010-09-09
    • Related Report
      2010 Annual Research Report
  • [Presentation] Rhodococcus jostii RHA1 の BphST 二成分制御系による転写誘導機構の解明

    • Author(s)
      下平潤
    • Organizer
      日本農芸化学会2012年度関東支部大会
    • Place of Presentation
      新潟薬科大学(新潟市)
    • Related Report
      2012 Annual Research Report
  • [Remarks]

    • URL

      http://bio.nagaokaut.ac.jp/~fukuda-l/

    • Related Report
      2012 Final Research Report
  • [Remarks] 環境微生物工学研究室

    • URL

      http://bio.nagaokaut.ac.jp/~fukuda-l/index-J.htm

    • Related Report
      2012 Annual Research Report
  • [Remarks] 長岡技術科学大学生物系研究室環境微生物工学研究室

    • URL

      http://bio.nagaokaut.ac.jp/labo/labo_13.html

    • Related Report
      2012 Annual Research Report

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Published: 2010-08-23   Modified: 2019-07-29  

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