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Determining adaptive traits and the candidate genes in Cuban Anolis lizards

Research Project

Project/Area Number 22405008
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section海外学術
Research Field Ecology/Environment
Research InstitutionTohoku University

Principal Investigator

KAWATA Masakado  東北大学, 大学院・生命科学研究科, 教授 (90204734)

Co-Investigator(Kenkyū-buntansha) MAKINO Takashi  東北大学, 大学院・生命科学研究科, 助教 (20443442)
北野 潤  東北大学, 大学院・生命科学研究科, 助教 (80346105)
田村 宏治  東北大学, 大学院・生命科学研究科, 教授 (70261550)
Co-Investigator(Renkei-kenkyūsha) KITANO Jun  国立遺伝学研究所, 新分野創造センター, 准教授 (80346105)
TAMURA Koji  東北大学, 大学院・生命科学研究科, 教授 (70261550)
TAKIMOTO Gaku  東邦大学, 理学部, 准教授 (90453852)
Project Period (FY) 2010 – 2012
Project Status Completed (Fiscal Year 2012)
Budget Amount *help
¥19,240,000 (Direct Cost: ¥14,800,000、Indirect Cost: ¥4,440,000)
Fiscal Year 2012: ¥6,110,000 (Direct Cost: ¥4,700,000、Indirect Cost: ¥1,410,000)
Fiscal Year 2011: ¥6,110,000 (Direct Cost: ¥4,700,000、Indirect Cost: ¥1,410,000)
Fiscal Year 2010: ¥7,020,000 (Direct Cost: ¥5,400,000、Indirect Cost: ¥1,620,000)
Keywordsアノールトカゲ / 適応放散 / 多様性 / 共存 / 適応形質 / 形態進化 / エコモルフ / 発生 / 四肢 / アノール
Research Abstract

The present results suggest that the species composition and richness in local assemblages could be explained by evolutionary history (the number of speciation events and limits to range expansion) and ecological processes (habitat partitioning). The results of developmental timings for divergence of hindlimb length showed that there are several important developmental stages for differentiation of hindlimb length between twig and trunk-ground species, depending on different elements of hindlimb.

Report

(4 results)
  • 2012 Annual Research Report   Final Research Report ( PDF )
  • 2011 Annual Research Report
  • 2010 Annual Research Report
  • Research Products

    (41 results)

All 2013 2012 2011 2010 Other

All Journal Article (23 results) (of which Peer Reviewed: 23 results) Presentation (18 results) (of which Invited: 1 results)

  • [Journal Article] Relative importance of habitat use, range expansion, and speciation in local species diversity of Anolis lizards in Cuba2013

    • Author(s)
      Cadiz Diaz, A., N. Nagata, M. Katabuchi, L. M. Diaz, L. M. Echenique-Diaz, H. D. Akashi, T. Makino, and M. Kawata
    • Journal Title

      Ecosphere

      Volume: (in press)

    • URL

      http://www.esajournals.org/loi/ecsp

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Genetic and environmental factors affecting cryptic variations in gene regulatory networks2013

    • Author(s)
      Iwasaki, W. M, M. E. Tsuda and M.Kawata
    • Journal Title

      BMC Evolutionary Biology

      Volume: 13 Issue: 1 Pages: 91-91

    • DOI

      10.1186/1471-2148-13-91

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] A comprehensive test for negative frequency-dependent selection2013

    • Author(s)
      Yuma Takahashi & Masakado Kawata
    • Journal Title

      Population Ecology

      Volume: 55 Issue: 3 Pages: 499-509

    • DOI

      10.1007/s10144-013-0372-7

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Expression of nos gene and firefly flashing: A test of nitric oxide-mediated flash control model2013

    • Author(s)
      Ohtsuki, H., J. Yokoyama, N. Ohba, Y. Ohmiya and M. Kawata
    • Journal Title

      Journal of Insect Science

      Volume: (in press)

    • URL

      http://www.insectscience.org

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Identification of dosage-sensitive genes in Saccharomyces cerevisiae using the genetic tug-of-war method2013

    • Author(s)
      Koji Makanae, Reiko Kintaka, Takashi Makino, Hiroaki Kitano and Hisao Moriya
    • Journal Title

      Genome Research

      Volume: 23 Issue: 2 Pages: 300-311

    • DOI

      10.1101/gr.146662.112

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Relative importance of habitat use, range expansion, and speciation in local species diversity of Anolis lizards in Cuba22013

    • Author(s)
      Cadiz, T.
    • Journal Title

      Ecosphere

      Volume: in press

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A comprehensive test for negative frequency-dependent selection.2013

    • Author(s)
      Takahashi, Y.
    • Journal Title

      Population Ecology

      Volume: in press

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Positionally-biased gene loss after whole genome duplication: evidence from human, yeast and plant2012

    • Author(s)
      Makino, T. and McLysaght, A.
    • Journal Title

      Genome Research

      Volume: 22(12) Issue: 12 Pages: 2427-2435

    • DOI

      10.1101/gr.131953.111

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Habitat variability correlates with duplicate content of Drosophila genomes2012

    • Author(s)
      Makino, T. and Kawata, M.
    • Journal Title

      Molecular Biology and Evolution

      Volume: 29 Issue: 10 Pages: 3169-3179

    • DOI

      10.1093/molbev/mss133

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Evolution of vertebratetissues driven by differential modes of gene duplication2012

    • Author(s)
      Satake, M., Kawata, M., McLysaght, A. andMakino, T.
    • Journal Title

      DNA Research

      Volume: 19 Issue: 4 Pages: 305-316

    • DOI

      10.1093/dnares/dss012

    • Related Report
      2012 Annual Research Report 2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Shifts in morphology and diet of non-native sticklebacks introduced into Japanese crater lakes2012

    • Author(s)
      Adachi T, Ishikawa A, Mori S, Makino W, Kume M, Kawata M, Kitano J
    • Journal Title

      Ecology and Evolution

      Volume: (In press) Issue: 6 Pages: 1083-1098

    • DOI

      10.1002/ece3.234

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Mammalian X Chromosome Inactivation evolved as a dosage compensation mechanism for dosage-sensitive genes on the X chromosome2012

    • Author(s)
      Pessia, E., Makino, T., Bailly-Bechet, M., McLysaght, A., and Marais, G.A.B.
    • Journal Title

      PNAS

      Volume: 109 Issue: 14 Pages: 5348-5351

    • DOI

      10.1073/pnas.1116763109

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Comprehensive Primer Design for Analysis of Population Genetics in Non-Sequenced Organisms2012

    • Author(s)
      Tezuka, A.N.Matsushima, Y.Nemoto, H.D.Akashi, M.Kawata, T.Makino
    • Journal Title

      PLoS ONE

      Volume: 7 Issue: 2 Pages: e32314-e32314

    • DOI

      10.1371/journal.pone.0032314

    • Related Report
      2012 Final Research Report 2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Optimal feeding under stoichiometric constraints: A model of compensatory feeding with functional response2012

    • Author(s)
      Suzuki-Ohno, Y., M. Kawata, and J. Urabe
    • Journal Title

      Oikos

      Volume: 121 Issue: 4 Pages: 569-578

    • DOI

      10.1111/j.1600-0706.2011.19320.x

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Divergence in Sex Steroid Hormone Signaling between Sympatric Species of Japanese Threespine Stickleback2011

    • Author(s)
      Kitano, J., Y. Kawagishi, S. Mori., C. L.Peichel., T. Makino, M. Kawata, M. Kusakabe
    • Journal Title

      PLoS ONE

      Volume: 6(12) Issue: 12 Pages: e29253-e29253

    • DOI

      10.1371/journal.pone.0029253

    • Related Report
      2012 Final Research Report 2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The long-term consequences of hybridization between the two Daphnia species, D.galeata and D.dentifera, in mature habitats2011

    • Author(s)
      Ishida, S, A.Takahashi, N.Matsushima, J.Yokoyama, W.Makino, J.Urabe, M.Kawata
    • Journal Title

      BMC Evolutionary Biology

      Volume: 11 Issue: 1 Pages: 209-209

    • DOI

      10.1186/1471-2148-11-209

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Phenotypic and genetic differences in a perennial herb across a natural gradient of CO_2 concentration2011

    • Author(s)
      Nakamura I, Onoda Y, Matsushima N, Yokoyama J, Kawata M, Hikosaka K
    • Journal Title

      Oecologia

      Volume: 165 Issue: 3 Pages: 809-818

    • DOI

      10.1007/s00442-010-1900-1

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] The MC1R gene in the guppy (Poecilia reticulata): Genotypic and phenotypic polymorphisms2011

    • Author(s)
      Tezuka, A , H. Yamamoto,J.Yokoyama,C. van Oosterhout, and M. Kawata
    • Journal Title

      BMC Research Notes

      Volume: 4 Issue: 1 Pages: 31-31

    • DOI

      10.1186/1756-0500-4-31

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Effects of evolutionary changes in prey use on the relationship between food web complexity and stability2011

    • Author(s)
      Yamaguchi, W. Kondoh, M and M. Kawata
    • Journal Title

      Population Ecology

      Volume: 53 Issue: 1 Pages: 59-72

    • DOI

      10.1007/s10144-010-0212-y

    • NAID

      10027622265

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Effects of evolutionary changes in prey use on the relationship between food web complexity and stability.2011

    • Author(s)
      Yamaguchi, W.Kondoh, M, M.Kawata
    • Journal Title

      Population Ecology

      Volume: 53 Pages: 59-72

    • NAID

      10027622265

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Evolution of gene regulatory networks by fluctuating selection and intrinsic constraints2010

    • Author(s)
      Tsuda, E. M. and M. Kawata
    • Journal Title

      PLoS Computational Biology

      Volume: 6(8) Issue: 8 Pages: e1000873-e1000873

    • DOI

      10.1371/journal.pcbi.1000873

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Why is adaptation prevented at ecological margins? New insights from individual-based simulations2010

    • Author(s)
      Bridle, J. R., J. Polechova, M. Kawata, R. K.Butlin
    • Journal Title

      Ecology Letters

      Volume: 13 Issue: 4 Pages: 485-494

    • DOI

      10.1111/j.1461-0248.2010.01442.x

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Evolution of gene regulatory networks by fluctuating selection and intrinsis constraints.2010

    • Author(s)
      Tsuda, E.M., M.Kawata
    • Journal Title

      PLoS Computational Biology

      Volume: 6

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Presentation] キューバ産アノールトカゲ属の四肢における筋骨格形態と行動生態の関係」2013

    • Author(s)
      安西航
    • Organizer
      第60回日本生態学会大会
    • Place of Presentation
      静岡コンベンションツアーセンター
    • Year and Date
      2013-03-08
    • Related Report
      2012 Final Research Report
  • [Presentation] アノールトカゲにおける温度適応形質の遺伝基盤の解明2013

    • Author(s)
      赤司寛志
    • Organizer
      第60回に本生態学会大会
    • Place of Presentation
      静岡コンベンションツアーセンター
    • Year and Date
      2013-03-08
    • Related Report
      2012 Final Research Report
  • [Presentation] Growth Trajectories of Limb Skeletal Elements in Two Phylogenetically-Related Cuban Anole Lizards2013

    • Author(s)
      Wakasa, H
    • Organizer
      CDB Symposium
    • Place of Presentation
      RIKEN Center for Developmental Biology, Kobe, Japan
    • Year and Date
      2013-03-05
    • Related Report
      2012 Final Research Report
  • [Presentation] アノールトカゲにおける温度適応形質の遺伝基盤の解明2013

    • Author(s)
      赤司寛志
    • Organizer
      第60回日本生態学会大会
    • Place of Presentation
      静岡コンベンションツアーセンター
    • Related Report
      2012 Annual Research Report
  • [Presentation] 2種の近縁なアノールトカゲの指長の形成過程の比較」2012

    • Author(s)
      若狭甫
    • Organizer
      第51回日本両棲爬虫類学会
    • Place of Presentation
      愛知学泉大
    • Year and Date
      2012-11-10
    • Related Report
      2012 Final Research Report
  • [Presentation] アノールトカゲ属の四肢における筋骨格形態と行動生態の関係2012

    • Author(s)
      安西航
    • Organizer
      第51回日本両棲爬虫類学会
    • Place of Presentation
      愛知学泉大
    • Year and Date
      2012-11-10
    • Related Report
      2012 Final Research Report
  • [Presentation] Relative role of evolutionary and ecological processes in community structures in Cuban Anoles 「Evolutionary Divergence and Ecological Collision ofLizards and Snakes2012

    • Author(s)
      Kawata, M
    • Organizer
      第28回個体群生態 学会大会
    • Place of Presentation
      東邦大学
    • Year and Date
      2012-10-20
    • Related Report
      2012 Final Research Report
  • [Presentation] キューバ産アノールトカゲ属の四肢における筋骨格形態と行動生態の関係2012

    • Author(s)
      安西航
    • Organizer
      第28回個体群生態学会大会
    • Place of Presentation
      東邦大学
    • Year and Date
      2012-10-20
    • Related Report
      2012 Final Research Report
  • [Presentation] アノールトカゲの後肢長差の詳細な形成過程について2012

    • Author(s)
      若狭甫
    • Organizer
      第14回日本進化学会
    • Place of Presentation
      首都大学東京
    • Year and Date
      2012-08-21
    • Related Report
      2012 Final Research Report
  • [Presentation] Genetic bases for different thermal microhabitat use in three Cuban Anolis lizards2012

    • Author(s)
      Akashi, H.D.
    • Organizer
      第14回日本進化学会
    • Place of Presentation
      首都大学東京
    • Year and Date
      2012-08-21
    • Related Report
      2012 Final Research Report
  • [Presentation] Genetic bases for adaptation to different thermal environment in Cuban Anolis Lizards.:EAFES52012

    • Author(s)
      Akashi, H.
    • Organizer
      日本生態学会 第59回大会
    • Place of Presentation
      龍谷大 学
    • Year and Date
      2012-03-19
    • Related Report
      2012 Final Research Report
  • [Presentation] Relative importance of range expansion, speciation and niche differences on regional species diversity in the trunk-ground Anolis lizards in Cuba.EAFES52012

    • Author(s)
      Cadis Diaz, A.
    • Organizer
      2 日本生態学会第59回大会
    • Place of Presentation
      龍谷大学
    • Year and Date
      2012-03-19
    • Related Report
      2012 Final Research Report
  • [Presentation] 2 Functional morphology and comparative anatomy of the limbs in Cuban Anolis Lizards with differentlocomotor habits.EAFES52012

    • Author(s)
      Anzai, W.
    • Organizer
      日本生態学会第59回大会
    • Place of Presentation
      龍谷大学
    • Year and Date
      2012-03-19
    • Related Report
      2012 Final Research Report
  • [Presentation] Genetic bases for adaptation to different thermal environment in Cuban Anolis Lizards2012

    • Author(s)
      Akashi, H., Cadiz Diaz, A., Makino, T., Kawata, M.
    • Organizer
      日本生態学会第59回大会
    • Place of Presentation
      龍谷大学
    • Year and Date
      2012-03-19
    • Related Report
      2011 Annual Research Report
  • [Presentation] アノールトカゲHSF遺伝子群の分子クローニングと機能進化2012

    • Author(s)
      松浦優基
    • Organizer
      第35回日本分子生物学会
    • Place of Presentation
      福岡
    • Related Report
      2012 Final Research Report
  • [Presentation] 適応進化を制限する遺伝的機構と生物多様性2011

    • Author(s)
      河田雅圭
    • Organizer
      第58回日本生態学会大会
    • Place of Presentation
      札幌コンベンションセンター
    • Year and Date
      2011-03-12
    • Related Report
      2010 Annual Research Report
  • [Presentation] Growth Trajectories of Limb Skeletal Elements in Two Phylogenetically-Related Cuban Anole Lizards

    • Author(s)
      Hajime Wakasa
    • Organizer
      CDB Symposium
    • Place of Presentation
      RIKEN Center for Developmental Biology
    • Related Report
      2012 Annual Research Report
  • [Presentation] Relative role of evolutionary and ecological processes in community structures in Cuban Anoles

    • Author(s)
      Kawata, M.
    • Organizer
      第28回個体群生態学会大会
    • Place of Presentation
      東邦大学
    • Related Report
      2012 Annual Research Report
    • Invited

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Published: 2010-08-23   Modified: 2019-07-29  

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