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Interaction of root-traits related QTL with soil stress factors in rainfed lowland and upland rice

Research Project

Project/Area Number 22405042
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section海外学術
Research Field Boundary agriculture
Research InstitutionNagoya University

Principal Investigator

YAMAUCHI Akira  名古屋大学, 生命農学研究科, 教授 (30230303)

Co-Investigator(Kenkyū-buntansha) MORITA Shigenori  東京大学, 大学院農学生命科学研究科, 教授 (00143404)
INUKAI Yoshiaki  名古屋大学, 農学国際教育協力研究センター, 准教授 (20377790)
ABE Jun  東京大学, 大学院農学生命科学研究科, 助教 (60221727)
KATO Yoichiro  東京大学, 大学院農学生命科学研究科, 助教 (50463881)
Project Period (FY) 2010-04-01 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥17,550,000 (Direct Cost: ¥13,500,000、Indirect Cost: ¥4,050,000)
Fiscal Year 2013: ¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2012: ¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Fiscal Year 2011: ¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Fiscal Year 2010: ¥6,370,000 (Direct Cost: ¥4,900,000、Indirect Cost: ¥1,470,000)
Keywords土壌環境 / 根 / QTL / 相互作用 / 天水田
Research Abstract

Roots play important roles in crop adaptation to various abiotic stresses such as water stress, but traits responsible for such adaptations may differ with environments. This study aimed at identifying the root traits and their associated QTL, and evaluating their interactions with soil water stresses. We made an extensive survey on genetic resources in rice in the Philippines and evaluated their responses to water stress conditions. We then identified the root plasticity as one of the key traits for adaptation and a QTL that is related with branching on chr 6. Field experiments showed the genotype that showed greater dry matter production under rainfed lowland conditions may have exhibited the root plasticity at soil depths with more available soil moistures. In cases where root plasticity at deeper soil layers were observed, such root plastic development may have occurred in response to the reduction of soil hardness when the soil moisture was high during soil moisture fluctuations.

Report

(5 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Annual Research Report
  • 2011 Annual Research Report
  • 2010 Annual Research Report
  • Research Products

    (37 results)

All 2014 2013 2012 2011

All Journal Article (5 results) (of which Peer Reviewed: 5 results) Presentation (32 results)

  • [Journal Article] Functional roles of the plasticity of root system development in dry matter production and water uptake under rainfed lowland conditions in rice : Evaluation of IR64 introgression lines (INLs)2013

    • Author(s)
      M. Nakata, V. Gowda, A. Henry, R. Serraj, Y. Inukai, D. Fujita, N. Kobayashi, R. Suralta, A. Yamauchi
    • Journal Title

      Field Crops Research

      Volume: 144 Pages: 288-296

    • DOI

      10.1016/j.fcr.2013.01.024

    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Roles of Root Aerenchyma Development and Its Associated QTL in Dry Matter Production under Transient Moisture Stress in Rice2013

    • Author(s)
      Niones, J. M., Suralta, R. R., Inukai, Y. and Yamauchi, A.
    • Journal Title

      Plant Production Science

      Volume: 16 Issue: 3 Pages: 205-216

    • DOI

      10.1626/pps.16.205

    • NAID

      130004850081

    • ISSN
      1343-943X, 1349-1008
    • Related Report
      2013 Annual Research Report 2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Functional roles of the plasticity of root system development in biomass production and water uptake under rainfed lowland conditions.2013

    • Author(s)
      Kano-Nakata, M., Gowda, V. R. P., Henry, A., Serraj, R., Inukai, Y., Fujita, D., Kobayashi, N., Suralta, R, R. and Yamauchi, A.
    • Journal Title

      Field Crops Research

      Volume: 144 Pages: 288-296

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Field evaluation on functional roles of root plastic responses on dry matter production and grain yield of rice under cycles of transient soil moisture stresses using chromosome segment substitution lines2012

    • Author(s)
      Jonathan M.Niones, Roel R.Suralta, Yoshiaki Inukai and Akira Yamauchi
    • Journal Title

      Plant and Soil

      Volume: 359巻 Issue: 1-2 Pages: 107-120

    • DOI

      10.1007/s11104-012-1178-7

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Field evaluation on functional roles of root plastic responses on dry matter production and grain yield of rice under cycles of transient soil moisture stresses using chromosome segment substitution lines2012

    • Author(s)
      Niones, J.M.
    • Journal Title

      Plant and Soil

      Volume: (印刷中)(in press)

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Presentation] Timing of root penetration in the hardpan during soil moisture fluctuations and its contribution to the water use during drought stress and dry matter production in rice2014

    • Author(s)
      Roel Rodriguez Suralta, Mana Kano-Nakata, Thiem Thi Tran, Jonathan Manito Niones, Akira Yamauchi
    • Organizer
      日本作物学会第237回講演会
    • Place of Presentation
      千葉大学
    • Year and Date
      2014-03-29
    • Related Report
      2013 Annual Research Report 2013 Final Research Report
  • [Presentation] Effects of soil compaction on the expression of plasticity in root system development triggered by water deficit conditions and nitrogen application and its contribution to dry matter production in rice2014

    • Author(s)
      Thiem Thi Tran, Daniel Menge, Mana Kano-Nakata, Roel Rodriguez Suralta, Shiro Mitsuya, Yoshiaki Inukai, Akira Yamauchi
    • Organizer
      日本作物学会第237回講演会
    • Place of Presentation
      千葉大学
    • Year and Date
      2014-03-29
    • Related Report
      2013 Annual Research Report 2013 Final Research Report
  • [Presentation] Functional roles of root developmental plasticity and its contribution to dry matter production under soil moisture fluctuation in rice introgression lines2014

    • Author(s)
      Stella Owusu Nketia, Yoshiaki Inukai, Shiro Mitsuya, Roel Rodriguez Suralta, Jonathan M. Niones, Akira Yamauchi
    • Organizer
      日本作物学会第237回講演会
    • Place of Presentation
      千葉大学
    • Year and Date
      2014-03-29
    • Related Report
      2013 Annual Research Report 2013 Final Research Report
  • [Presentation] イネ種子根軸上における異形側根の発生部位と導管成熟部位との関係2014

    • Author(s)
      株木拓也,山内章
    • Organizer
      日本作物学会第237回講演会
    • Place of Presentation
      千葉大学
    • Year and Date
      2014-03-29
    • Related Report
      2013 Annual Research Report 2013 Final Research Report
  • [Presentation] Soil compaction effects on the expression of development plasticity of root system triggered by mild drought stress x nitrogen application in rice2013

    • Author(s)
      Thiem Thi Tran, Mana Kano-Nakata, Daniel Menge, Roel R. Suralta, Shiro Mitsuya, Akira Yamauchi
    • Organizer
      第39回根研究集会
    • Place of Presentation
      畜産草地研究所那須研究拠点
    • Year and Date
      2013-11-09
    • Related Report
      2013 Annual Research Report 2013 Final Research Report
  • [Presentation] イネ種子根系における異形側根間での発育部位と導管成熟部位との関係における差異2013

    • Author(s)
      株木拓也・三屋史朗・山内 章
    • Organizer
      第39回根研究集会
    • Place of Presentation
      畜産草地研究所那須研究拠点
    • Year and Date
      2013-11-09
    • Related Report
      2013 Annual Research Report 2013 Final Research Report
  • [Presentation] 土壌水分変動条件に適応したイネ系統における乾燥ストレス後の再潅水に対する根系発育反応2013

    • Author(s)
      仲田(狩野)麻奈・Henry Amelia・小林信哉・Rachid Serraj・福田善通・山内 章
    • Organizer
      第39回根研究集会
    • Place of Presentation
      畜産草地研究所那須研究拠点
    • Year and Date
      2013-11-09
    • Related Report
      2013 Annual Research Report 2013 Final Research Report
  • [Presentation] 土壌乾燥条件下でのイネ乾物生産における根系発達と根水通導性の貢献度に関する定量的評価2013

    • Author(s)
      亀岡 笑・Amelia Henry・三屋史朗・山内 章
    • Organizer
      日本作物学会東海支部第144回講演会
    • Place of Presentation
      岐阜大学
    • Year and Date
      2013-09-27
    • Related Report
      2013 Final Research Report
  • [Presentation] Expression of developmental plasticity of root system as affected by water deficit conditions and nitrogen forms interaction in rice2013

    • Author(s)
      Thiem Thi Tran, Mana Kano-Nakata, Shiro Mitsuya and Akira Yamauchi
    • Organizer
      日本作物学会第236回講演会
    • Place of Presentation
      鹿児島大学
    • Year and Date
      2013-09-10
    • Related Report
      2013 Final Research Report
  • [Presentation] イネ根系の発育的可塑性が果たす耐旱性への貢献度における品種間差異2013

    • Author(s)
      亀岡笑・三屋史朗・山内章
    • Organizer
      日本作物学会第236回講演会
    • Place of Presentation
      鹿児島大学
    • Year and Date
      2013-09-10
    • Related Report
      2013 Final Research Report
  • [Presentation] Root hydraulic conductance measurement with root pressure chamber method at different growth stages in rice2013

    • Author(s)
      Emi Kameoka, Amelia Henry, Shiro Mitsuya and Akira Yamauchi
    • Organizer
      第38回根研究集会
    • Place of Presentation
      ホテルニュー種子島
    • Year and Date
      2013-05-17
    • Related Report
      2013 Annual Research Report 2013 Final Research Report
  • [Presentation] Genotypic variation in root hydraulic conductivity of rice in response to mild drought stress2013

    • Author(s)
      Emi Kameoka, Amelia Henry, Roel R. Suralta, Shiro Mitsuya1 and Akira Yamauchi
    • Organizer
      日本作物学会第235回講演会
    • Place of Presentation
      明治大学
    • Year and Date
      2013-03-28
    • Related Report
      2013 Final Research Report
  • [Presentation] 土壌乾燥条件下でのイネ乾物生産における根系発達と根水通導性の貢献度に関する定量的評価2013

    • Author(s)
      亀岡笑・Amelia Henry・三屋史朗・山内章
    • Organizer
      日本作物学会東海支部第144回講演会
    • Place of Presentation
      岐阜大学大学院連合農学獣医学棟
    • Related Report
      2013 Annual Research Report
  • [Presentation] Expression of developmental plasticity of root system as affected by water deficit conditions and nitrogen forms interaction in rice2013

    • Author(s)
      Thiem Thi Tran, Mana Kano-Nakata, Shiro Mitsuya and Akira Yamauchi
    • Organizer
      日本作物学会第236回講演会
    • Place of Presentation
      鹿児島大学郡元キャンパス
    • Related Report
      2013 Annual Research Report
  • [Presentation] イネ根系の発育的可塑性が果たす耐旱性への貢献度における品種間差異2013

    • Author(s)
      亀岡 笑・三屋 史朗・山内 章
    • Organizer
      日本作物学会第236回講演会
    • Place of Presentation
      鹿児島大学郡元キャンパス
    • Related Report
      2013 Annual Research Report
  • [Presentation] Genotypic variation in root hydraulic conductivity of rice in response to mild drought stress2013

    • Author(s)
      Emi Kameoka, Amelia Henry, Roel R. Suralta, Shiro Mitsuya and Akira Yamauchi
    • Organizer
      第235回日本作物学会講演会
    • Place of Presentation
      明治大学
    • Related Report
      2012 Annual Research Report
  • [Presentation] Undestructive quantification of root system development in ERICA varieties under different intensities of water deficit by using minirhizotron root scanner2012

    • Author(s)
      Daniel M. Menge, Daigo Makihara, Mana Kano-Nakata, Hidetoshi Asai, Shuichi Asanuma and Akira Yamauchi
    • Organizer
      第234回日本作物学会講演会
    • Place of Presentation
      東北大学
    • Year and Date
      2012-09-10
    • Related Report
      2013 Final Research Report
  • [Presentation] Soil moisture and soil strength interaction impacts on root distribution and dry matter production in rainfed lowland rice fields in the Philippines2012

    • Author(s)
      Mana Kano-Nakata, Roel R. Suralta, Filomena S. Grospe, Maria Corazon N. Julaton, Anna Theresa Isabel O. Rebong, Andrea M. Flores, Yoshiaki Inukai, Jonathan M. Niones, Emi Kameoka, Shigenori Morita, Jun Abe, Yoichiro Kato, Yoshimichi Fukuta, Nobuya Kobayashi and Akira Yamauchi
    • Organizer
      第234回日本作物学会講演会
    • Place of Presentation
      東北大学
    • Year and Date
      2012-09-10
    • Related Report
      2013 Final Research Report 2012 Annual Research Report
  • [Presentation] 乾燥ストレス条件下のイネ乾物生産における根系の可塑的発育の役割2012

    • Author(s)
      亀岡笑・山内章
    • Organizer
      第234回日本作物学会講演会
    • Place of Presentation
      東北大学
    • Year and Date
      2012-09-10
    • Related Report
      2013 Final Research Report 2012 Annual Research Report
  • [Presentation] Undestructive quantification of root system development in NERICA varieties under different intensities of water deficit by using minirhizotron root scanner2012

    • Author(s)
      Daniel M. Menge, Daigo Makihara, Mana Kano-Nakata, Hidetoshi Asai, Shuichi Asanuma and Akira Yamauchi
    • Organizer
      第234回日本作物学会講演会
    • Place of Presentation
      東北大学
    • Related Report
      2012 Annual Research Report
  • [Presentation] QTL for the plasticity in root system development triggered by soil moisture fluctuation stress in rice2011

    • Author(s)
      Jonathan M. Niones and Akira Yamauchi
    • Organizer
      The JSRR's 20th Anniversary Symposium, "The Latest Frontiers of Root Research in Asia" and 35th JSRR Biannual Meeting
    • Place of Presentation
      東京大学
    • Year and Date
      2011-11-06
    • Related Report
      2013 Final Research Report
  • [Presentation] QTL for the plasticity in root system development triggered by soil moisture fluctuation stress in rice2011

    • Author(s)
      Jonathan M.Niones
    • Organizer
      The JSRR's 20th Anniversary Symposium, "The Latest Frontiers of Root Research in Asia" and 35th JSRR Biannual Meeting
    • Place of Presentation
      東京大学弥生講堂(東京都)
    • Year and Date
      2011-11-06
    • Related Report
      2011 Annual Research Report
  • [Presentation] QTLs on Chromosome 12 Responsible for Expressing Root Plasticity under Transient Soil Moisture Fluctuation Stress in Rice2011

    • Author(s)
      Jonathan M. Niones, Yoshiaki Inukai and Akira Yamauchi
    • Organizer
      The 7th Asian Crop Science Association Conference
    • Place of Presentation
      IPB International Convention Center Bogor
    • Year and Date
      2011-09-29
    • Related Report
      2013 Final Research Report
  • [Presentation] QTLs on Chromosome 12 Responsible for Expressing Root Plasticity under Transient Soil Moisture Fluctuation Stress in Rice2011

    • Author(s)
      Jonathan M.Niones
    • Organizer
      The 7th Asian Crop Science Association Conference
    • Place of Presentation
      IPB International Convention Center-Bogor(インドネシア)
    • Year and Date
      2011-09-29
    • Related Report
      2011 Annual Research Report
  • [Presentation] Measurement of bleeding rate and nitrogen content in bleeding sap of rice for evaluating the activity of root system2011

    • Author(s)
      Abe, J., Morita, S.
    • Organizer
      Seminar on Functional Roles of Roots in the Adaptation and Yield Improvement of Rice under Drought-prone Ecosystems
    • Place of Presentation
      Philippine Rice Research Institute(フィリピン)
    • Year and Date
      2011-09-19
    • Related Report
      2010 Annual Research Report
  • [Presentation] Rice production under drought and water-saving irrigation2011

    • Author(s)
      Yoichiro Kato
    • Organizer
      Seminar on Functional Roles of Roots in the Adaptation and Yield Improvement of Rice under Drought-prone Ecosystems
    • Place of Presentation
      Philippine Rice Research Institute(フィリピン)
    • Year and Date
      2011-09-19
    • Related Report
      2010 Annual Research Report
  • [Presentation] Desirable root traits under water stress conditions in rice2011

    • Author(s)
      Mana Nakata
    • Organizer
      Seminar on Functional Roles of Roots in the Adaptation and Yield Improvement of Rice under Drought-prone Ecosystems
    • Place of Presentation
      Philippine Rice Research Institute(フィリピン)
    • Year and Date
      2011-09-19
    • Related Report
      2010 Annual Research Report
  • [Presentation] Background and philosophy of the Nagoya University- PhilRice collabor ative project on Rainfed lowland rice research2011

    • Author(s)
      Akira Yamauchi
    • Organizer
      Seminar on Functional Roles of Roots in the Adaptation and Yield Improvement of Rice under Drought-prone Ecosystems
    • Place of Presentation
      Philippine Rice Research Institute(フィリピン)
    • Year and Date
      2011-09-19
    • Related Report
      2010 Annual Research Report
  • [Presentation] Genetic improvement of root system formation for adaptation to soil moisture fluctuation stress conditions in rice2011

    • Author(s)
      Inukai, Y.
    • Organizer
      Meeting-workshop on the "GCP : Targeting Drought-avoidance root traits to enhance rice productivity under water-limited environment"
    • Place of Presentation
      International Rice Research Institute(フィリピン)
    • Year and Date
      2011-09-13
    • Related Report
      2010 Annual Research Report
  • [Presentation] Role of root plasticity for dry matter production and yield under fluctuating soil moisture stress2011

    • Author(s)
      Suralta, R.R.
    • Organizer
      Meeting-workshop on the "GCP : Targeting Drought-avoidance root traits to enhance rice productivity under water-limited environment"
    • Place of Presentation
      International Rice Research Institute(フィリピン)
    • Year and Date
      2011-09-13
    • Related Report
      2010 Annual Research Report
  • [Presentation] Root aerenchyma formation in relation to dry matter production under continuous cycle of transient soil moisture fluctuation stress in field in the chromosome segment substitution lines of rice2011

    • Author(s)
      Jonathan M. Niones, Yoshiaki Inukai and Akira Yamauchi
    • Organizer
      第34回根研究集会
    • Place of Presentation
      佐賀大学
    • Year and Date
      2011-05-14
    • Related Report
      2013 Final Research Report
  • [Presentation] Root aerenchyma formation in relation to dry matter production under continuous cycle of transient soil moisture fluctuation stress in field in the chromosome segment substitution lines of rice2011

    • Author(s)
      Jonathan M.Niones
    • Organizer
      第34回根研究会
    • Place of Presentation
      佐賀大学農学部(佐賀県)
    • Year and Date
      2011-05-14
    • Related Report
      2010 Annual Research Report

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Published: 2010-08-23   Modified: 2019-07-29  

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