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Isomer-specific synthesis of phosphatidylinositol by engineered phospholipase D

Research Project

Project/Area Number 22560770
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Biofunction/Bioprocess
Research InstitutionNagoya University

Principal Investigator

IWASAKI Yugo  名古屋大学, 生命農学研究科, 准教授 (50273214)

Project Period (FY) 2010 – 2012
Project Status Completed (Fiscal Year 2012)
Budget Amount *help
¥4,420,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥1,020,000)
Fiscal Year 2012: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2011: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2010: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Keywords生体触媒工学 / ホスホリパーゼD / ホスファチジルイノシトール / 位置特異性 / 酵素反応 / 脂質
Research Abstract

Attempts were made to brush up phosphatidylinositol-synthesizing phospholipase D using protein engineering technique. First, the positional specificity of the enzyme was improved by mutation at the residues that form the “inner wall” of the inositol binding pocket. It was fond that the substitutions of G186 and D189 were effective to improve the specificity, resulting in 93% 1-PI. Second attempt was to improve the thermostability. Random mutation was introduced to the residues with high B-factor. The resultant libraries were screened for enhanced thermostabiliy, and we have successfully isolated mutants with the desired property. Finally, another mutant with deletion at an unstable 9-residue loop was constructed. The constructed deletion mutant showed further improved stability.

Report

(4 results)
  • 2012 Annual Research Report   Final Research Report ( PDF )
  • 2011 Annual Research Report
  • 2010 Annual Research Report
  • Research Products

    (39 results)

All 2013 2012 2011 2010

All Journal Article (6 results) (of which Peer Reviewed: 6 results) Presentation (33 results) (of which Invited: 2 results)

  • [Journal Article] Simple and efficient profiling of phospholipids in phospholipase D-modified soy lecithin by HPLC with charged aerosol detection.2013

    • Author(s)
      Jasmina Damnjanovi., Hideo Nakano and Yugo Iwasaki
    • Journal Title

      J. Am. Oil Chem. Soc.

      Volume: (in press)

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Phospholipase D as a catalyst: application in phospholipid synthesis, molecular structure and protein engineering.2013

    • Author(s)
      Jasmina Damnjanovi. and Yugo Iwasaki
    • Journal Title

      J. Biosci. Bioeng.

      Volume: (in press)

    • NAID

      110009657219

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Simple and efficient profiling of phospholipids in phospholipase D-modified soy lecithin by HPLC with charged aerosol detection.2013

    • Author(s)
      Jasmina Damnjanovic, Hideo Nakano and Yugo Iwasaki
    • Journal Title

      Journal of American Oil Chemists'. Society

      Volume: - Issue: 7 Pages: 951-957

    • DOI

      10.1007/s11746-013-2236-x

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Phospholipase D as a catalyst: application in phospholipid synthesis, molecular structure and protein engineering.2013

    • Author(s)
      Jasmina Damnjanovic and Yugo Iwasaki
    • Journal Title

      Journal of Bioscience and Bioengineering

      Volume: - Issue: 3 Pages: 271-280

    • DOI

      10.1016/j.jbiosc.2013.03.008

    • NAID

      110009657219

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Improving thermostability of phosphatidylinositol-synthesizing Streptomyces phospholipase D.2012

    • Author(s)
      Jasmina Damnjanovi., Rie Takahashi, Atsuo Suzuki, Hideo Nakano and Yugo Iwasaki
    • Journal Title

      Protein Eng. Des. Sel.

      Volume: 25 Pages: 415-424

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Improving thermostability of phosphatidylinositol-synthesizing Streptomyces phospholipase D.2012

    • Author(s)
      Jasmina Damnjanovic, Rie Takahashi, Atsuo Suzuki, Hideo Nakano and Yugo Iwasaki
    • Journal Title

      Protein Engineering Design and Selection.

      Volume: 25 Issue: 8 Pages: 415-424

    • DOI

      10.1093/protein/gzs038

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Presentation] 放線菌ホスホリパーゼD の蛋白工学的機能改変2013

    • Author(s)
      岩崎雄吾
    • Organizer
      酵素工学研究会第69回講演会
    • Place of Presentation
      名古屋
    • Related Report
      2012 Final Research Report
  • [Presentation] 放線菌ホスホリパーゼDの蛋白工学的機能改変2013

    • Author(s)
      岩崎雄吾
    • Organizer
      酵素工学研究会 第69回講演会
    • Place of Presentation
      名古屋大学(名古屋)
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] Influence of surface loop (D40 loop) deletion on expression and stability of Streptomyces antibioticus phospholipase D2012

    • Author(s)
      ダムニャノビッチヤスミナ、中野秀雄、岩崎雄吾
    • Organizer
      日本農芸化学会2012大会
    • Place of Presentation
      京都女子大学
    • Year and Date
      2012-03-24
    • Related Report
      2011 Annual Research Report
  • [Presentation] 改変型ホスホリパーゼDによるホスファチジルイノシトールの酵素合成2012

    • Author(s)
      岩崎雄吾
    • Organizer
      学際的脂質創製研究部会
    • Place of Presentation
      大阪市立工業研究所(招待講演)
    • Year and Date
      2012-01-27
    • Related Report
      2011 Annual Research Report
  • [Presentation] 改変型ホスホリパーゼD によるホスファチジルイノシトールの酵素合成2012

    • Author(s)
      岩崎雄吾
    • Organizer
      学際的脂質創製研究部会
    • Place of Presentation
      大阪
    • Related Report
      2012 Final Research Report
  • [Presentation] Influence of surface loop (D40 loop) deletion on expression and stability of Streptomyces antibioticus phospholipase D2012

    • Author(s)
      ダムニャノビッチヤスミナ,中野秀雄, 岩崎雄吾
    • Organizer
      日本農芸化学会2012 大会
    • Place of Presentation
      京都
    • Related Report
      2012 Final Research Report
  • [Presentation] Characterization of Streptomyces antibioticus phospholipase D deletion mutant2012

    • Author(s)
      Damnjanovic, J., Nakano, H. and Iwasaki, Y.
    • Organizer
      The 12th Japan-China-Korea Joint Symposium on Enzyme Engineering
    • Place of Presentation
      Kanazawa
    • Related Report
      2012 Final Research Report
  • [Presentation] Synthesis of phosphatidylinositol catalyzed by thermostable variants of Streptomyces phospholipase D2012

    • Author(s)
      Damnjanovic, J., Nakano, H. and Iwasaki, Y
    • Organizer
      15 th European Congress of Biotechnology
    • Place of Presentation
      Istanbul, Turkey
    • Related Report
      2012 Final Research Report
  • [Presentation] Surface loop deletion as a strategy for enzyme thermostabilization2012

    • Author(s)
      Damnjanovic, J., Nakano, H. and Iwasaki, Y.
    • Organizer
      日本生物工学会2012 年大会
    • Place of Presentation
      神戸
    • Related Report
      2012 Final Research Report
  • [Presentation] ホスファチジルイノシトール合成型ホスホリパーゼD においてイノシトール配向を決定するアミノ酸残基2012

    • Author(s)
      石田健,田中秀俊,Damnjanovic Jasmina, 中野秀雄, 岩崎雄吾
    • Organizer
      日本生物工学会2012年大会
    • Place of Presentation
      神戸
    • Related Report
      2012 Final Research Report
  • [Presentation] ホスファチジルイノシトール合成型ホスホリパーゼD におけるイノシトールの配向を決定するアミノ酸残基2012

    • Author(s)
      石田健,田中秀俊,ダムニャノビッチ・ヤスミナ,中野秀雄,岩崎雄吾
    • Organizer
      日本農芸化学会中部支部第165回例会
    • Place of Presentation
      名古屋
    • Related Report
      2012 Final Research Report
  • [Presentation] 放線菌ホスホリパーゼD の基質特異性改変2012

    • Author(s)
      岩崎雄吾
    • Organizer
      2012年度酵素補酵素研究会
    • Place of Presentation
      名古屋
    • Related Report
      2012 Final Research Report
  • [Presentation] 改変型ホスホリパーゼD によるホスファチジルイノシトールの合成2012

    • Author(s)
      岩崎雄吾
    • Organizer
      第11回ホスファチジルセリン研究会
    • Place of Presentation
      東京
    • Related Report
      2012 Final Research Report
  • [Presentation] Characterization of Streptomyces antibioticus phospholipase D deletion mutant.2012

    • Author(s)
      Damnjanovic, J., Nakano, H. and Iwasaki, Y.
    • Organizer
      The 12th Japan-China-Korea Joint Symposium on Enzyme Engineering
    • Place of Presentation
      金沢エクセルホテル東急(金沢)
    • Related Report
      2012 Annual Research Report
  • [Presentation] 放線菌ホスホリパーゼDの基質特異性改変 平成24年7月、名古屋2012

    • Author(s)
      岩崎雄吾
    • Organizer
      2012年度酵素補酵素研究会
    • Place of Presentation
      名古屋大学(名古屋)
    • Related Report
      2012 Annual Research Report
  • [Presentation] Synthesis of phosphatidylinositol catalyzed by thermostable variants of Streptomyces phospholipase D.2012

    • Author(s)
      Damnjanovic, J., Nakano, H. and Iwasaki, Y.
    • Organizer
      15th European Congress of Biotechnology
    • Place of Presentation
      The Grand Cevahir Hotel (Istanbul, Turkey)
    • Related Report
      2012 Annual Research Report
  • [Presentation] Surface loop deletion as a strategy for enzyme thermostabilization.2012

    • Author(s)
      Damnjanovic, J., Nakano, H. and Iwasaki, Y.
    • Organizer
      日本生物工学会2012年度大会
    • Place of Presentation
      神戸国際会議場(神戸)
    • Related Report
      2012 Annual Research Report
  • [Presentation] ホスファチジルイノシトール合成型ホスホリパーゼDにおいてイノシトール配向を決定するアミノ酸残基2012

    • Author(s)
      石田健,田中秀俊,Damnjanovic Jasmina、 中野秀雄,岩崎雄吾
    • Organizer
      日本生物工学会2012年度大会
    • Place of Presentation
      神戸国際会議場(神戸)
    • Related Report
      2012 Annual Research Report
  • [Presentation] ホスファチジルイノシトール合成型ホスホリパーゼDにおいてイノシトール配向を決定するアミノ酸残基2012

    • Author(s)
      石田健,田中秀俊,Damnjanovic Jasmina、 中野秀雄,岩崎雄吾
    • Organizer
      日本農芸化学会中部支部第165回例会
    • Place of Presentation
      名古屋大学(名古屋)
    • Related Report
      2012 Annual Research Report
  • [Presentation] 改変型ホスホリパーゼDによるホスファチジルイノシトールの合成2012

    • Author(s)
      岩崎雄吾
    • Organizer
      第11回ホスファチジルセリン研究会
    • Place of Presentation
      東京海洋大学(東京)
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] Enzymatic synthesis of phosphatidylinositols by phospholipase D2011

    • Author(s)
      岩崎雄吾
    • Organizer
      7th International Symposium on Biocatalysis and Agricultural Biotechnology
    • Place of Presentation
      京都大学(招待講演)
    • Year and Date
      2011-10-11
    • Related Report
      2011 Annual Research Report
  • [Presentation] A rapid and efficient HPLC method for profiling of phospholipids from soy lecithin used as substrate for 1(3)-PI synthesis catalyzed by mutant phospholipase D2011

    • Author(s)
      Damnjanovic, J., Takahashi, R., Nakano, H., Iwasaki, Y.
    • Organizer
      9th Euro Fed Lipid Congress
    • Place of Presentation
      Amsterdamオランダ
    • Year and Date
      2011-09-19
    • Related Report
      2011 Annual Research Report
  • [Presentation] Enzymatic synthesis of phosphatidylinositols by phospholipase D2011

    • Author(s)
      Iwasaki, Y.
    • Organizer
      7th International Symposium on Biocatalysis and Agricultural Biotechnology
    • Place of Presentation
      Kyoto
    • Related Report
      2012 Final Research Report
  • [Presentation] Phosphatidylinositol (PI) synthesis using thermostable Streptomyces antibioticus phospholipase D (PLD) mutants2011

    • Author(s)
      Damnjanovic, J., Takahashi, R., Nakano, H. and Iwasaki, Y.
    • Organizer
      International Union of Microbiological Societies 2011 Congress
    • Place of Presentation
      Sapporo
    • Related Report
      2012 Final Research Report
  • [Presentation] A rapid and efficient HPLC method for profiling of phospholipids from soy lecithin used as substrate for catalyzed by mutant phospholipase D2011

    • Author(s)
      Damnjanovic, J., Takahashi, R., Nakano, H. and Iwasaki, Y.
    • Organizer
      9th Euro Fed Lipid Congress
    • Place of Presentation
      Amsterdam, Netherland
    • Related Report
      2012 Final Research Report
  • [Presentation] Altering substrate specificity of phospholipase D by protein engineering.2010

    • Author(s)
      Yugo Iwasaki, Atsushi Masayama, Hideo Nakano
    • Organizer
      International Chemical Congress of Pacific Basin Societies 2010
    • Place of Presentation
      ホノルル、アメリカ
    • Year and Date
      2010-12-17
    • Related Report
      2010 Annual Research Report
  • [Presentation] Streptomyces phospholipase D with altered substrate specificity capable of synthesizing phosphatidylinositols2010

    • Author(s)
      Yugo IWASAKI
    • Organizer
      8th Euro Fed Lipid Congress
    • Place of Presentation
      ミュンヘン、ドイツ
    • Year and Date
      2010-11-23
    • Related Report
      2010 Annual Research Report
  • [Presentation] ボスファチジルイノシトール合成型ホスホリパーゼDの位置選択性の解析2010

    • Author(s)
      尾崎朱里、岩崎雄吾、中寿秀雄
    • Organizer
      日本農芸化学会中部支部第159回例会
    • Place of Presentation
      名古屋大学(愛知県)
    • Year and Date
      2010-10-30
    • Related Report
      2010 Annual Research Report
  • [Presentation] ホスホリパーゼを用いたホスファチジルイノジトール異性体の選択的合成2010

    • Author(s)
      永坂和寛、岩崎雄吾、中野秀雄
    • Organizer
      日本農芸化学会中部支部第159回例会
    • Place of Presentation
      名古屋大学(愛知県)
    • Year and Date
      2010-10-30
    • Related Report
      2010 Annual Research Report
  • [Presentation] ホスファチジルイノシトール合成型ホスホリパーゼD の位置選択性の解析2010

    • Author(s)
      尾崎朱里,岩崎雄吾,中野秀雄
    • Organizer
      日本農芸化学会中部支部第159回例会
    • Place of Presentation
      名古屋
    • Related Report
      2012 Final Research Report
  • [Presentation] ホスホリパーゼを用いたホスファチジルイノシトール異性体の選択的合成2010

    • Author(s)
      永坂和寛,岩崎雄吾,中野秀雄
    • Organizer
      日本農芸化学会中部支部第159回例会
    • Place of Presentation
      名古屋
    • Related Report
      2012 Final Research Report
  • [Presentation] Streptomyces phospholipase D with altered substrate specificity capable of synthesizing phosphatidylinositols2010

    • Author(s)
      Iwasaki, Y.
    • Organizer
      8th Euro Fed Lipid Congress
    • Place of Presentation
      Munchen, Germany
    • Related Report
      2012 Final Research Report
  • [Presentation] Altering substrate specificity of phospholipase D by protein engineering2010

    • Author(s)
      Iwasaki, Y., Masayama, A. and Nakano H.
    • Organizer
      International Chemical Congress of Pacific Basin Societies 2010
    • Place of Presentation
      Honolulu, USA
    • Related Report
      2012 Final Research Report

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Published: 2010-08-23   Modified: 2019-07-29  

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