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Taxonomy and molecular evolution for environmental adaptation contributed to speciation of green algal genus Ulva

Research Project

Project/Area Number 22570086
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Biodiversity/Systematics
Research InstitutionOchanomizu University

Principal Investigator

SHIMADA SATOSHI  お茶の水女子大学, 大学院人間文化創成科学研究科, 准教授 (40322854)

Co-Investigator(Renkei-kenkyūsha) MIYAMOTO Shinichi  筑波大学, 大学院生命環境科学領域, 准教授 (00192766)
Project Period (FY) 2010-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2013: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2012: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2011: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2010: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Keywords緑藻類 / アオサ類 / 種多様性 / 環境適応 / 分子進化 / 新種記載 / nrITS / rbcL / Ulva / RNA-seq / SSR / 海藻類 / 分類 / 進化 / 集団遺伝構造解析 / マイクロサテライト / 種分類 / 種分化 / 緑藻 / アオサ / RNAseq
Outline of Final Research Achievements

This study focused on the taxonomy and molecular evolution for environmental adaptation contributed to speciation of green algal genus Ulva. Ulva meridionalis Horimoto et Shimada sp. nov. was described from the Todoroki River, Okinawa Prefecture. Ulva adhaerens Matsumoto et Shimada sp. nov. was described from the samples resembling U. conglobate. Ulva tepida Masakiyo et Shimada sp. nov. was described from Kanto region. Ulva linza (seawater), U. prolifera (brackish water) and bloom strain (seawater) were closely related in nrITS2 analysis. After 7 days of freshwater exposure, the viability of U. linza decreased to approximately 20%, while U. prolifera showed nearly 100% viability. In order to search what genes are related to low-salinity adaptation of U. prolifera, the expressed genes of U. prolifera and U. linza cultured under seawater (SW), brackish water (BW) and freshwater (FW) conditions were compared by RNA-seq.

Report

(5 results)
  • 2014 Final Research Report ( PDF )
  • 2013 Annual Research Report
  • 2012 Annual Research Report
  • 2011 Annual Research Report
  • 2010 Annual Research Report
  • Research Products

    (23 results)

All 2015 2014 2013 2011 2010 Other

All Journal Article (9 results) (of which Peer Reviewed: 9 results,  Acknowledgement Compliant: 1 results) Presentation (14 results)

  • [Journal Article] ystematics of green algae resembling Ulva conglobata, with a description of Ulva adhaerens sp. nov. (Ulvales, Ulvophyceae).2015

    • Author(s)
      Kaoru Matsumoto and Satoshi Shimada
    • Journal Title

      European Journal of Phycology

      Volume: 50 Issue: 1 Pages: 100-111

    • DOI

      10.1080/09670262.2014.994189

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Development of a rapid and accurate PCR-based detection method for commercially valuable green algal species2014

    • Author(s)
      Yuumi Kawashima, Tetsuya Akasaki, Yoshitsugu Matsumoto and Satoshi Shimada
    • Journal Title

      Fisheries Science

      Volume: 80 Issue: 4 Pages: 859-867

    • DOI

      10.1007/s12562-014-0760-8

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Species diversity of the genus Ulva (Ulvophyceae, Chlorophyta) in Japanese waters, with special reference to Ulva tepida Masakiyo et S.Shimada sp. nov.2014

    • Author(s)
      Yuka Masakiyo & Satoshi Shimada
    • Journal Title

      Bulletin of the National Museum of Nature and Science, Series B

      Volume: 40 Pages: 1-13

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Comparing the low-salinity tolerance of Ulva species distributed in different environments.2013

    • Author(s)
      Kensuke Ichihara, Kazuyuki Miyaji and Satoshi Shimada
    • Journal Title

      Phycological Research

      Volume: 61 Issue: 1 Pages: 52-56

    • DOI

      10.1111/j.1440-1835.2012.00668.x

    • NAID

      40019561534

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Species identification of imported and Japanese commercial green algal products, based on phylogenetic analyses using the nrITS2 and 5S rDNA spacer regions.2013

    • Author(s)
      Yuumi Kawashima, Tetsuya Akasaki, Yoshitsugu Matsumoto, Yukihiko Yamazaki and Satoshi Shimada
    • Journal Title

      Fisheries Science

      Volume: 79 Issue: 3 Pages: 521-529

    • DOI

      10.1007/s12562-013-0610-0

    • NAID

      10031158699

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Enteromorpha-like Ulva (Ulvophyceae, Chlorophyta) growing in the Todoroki River, Ishigaki island, Japan, with special reference to Ulva meridionalis Horimoto et Shimada sp.nov.2011

    • Author(s)
      Horimoto, et al.
    • Journal Title

      Bulletion of the National Science Museum

      Volume: 37 Pages: 155-167

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Isolation and temporal expression analysis of freshwater-induced genes in Ulva limnetica (Ulvales, Chlorophyta)2011

    • Author(s)
      Ichihara, et al.
    • Journal Title

      Journal of Phycology

      Volume: 47 Pages: 584-590

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Culture and hybridization experiments on an Ulva clade including the Qingdao strain blooming in the Yellow Sea2011

    • Author(s)
      Hiraoka, et al.
    • Journal Title

      PLoS ONE

      Volume: 6 Pages: 1-6

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Phylogeographic analysis of the genus Ulva (Ulvales, Chlorophyta), in cluding bloom sample in Qingdao, China2010

    • Author(s)
      Shimada, et al
    • Journal Title

      Coastal Marine Science

      Volume: 34 Pages: 117-122

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Presentation] 緑藻アオサ類における異なる塩環境下での生育特性比較解析2014

    • Author(s)
      正清友香・市原健介・小倉淳・嶌田智
    • Organizer
      第78回日本植物学会
    • Place of Presentation
      明治大学
    • Year and Date
      2014-09-13
    • Related Report
      2013 Annual Research Report
  • [Presentation] 緑藻アオサ属藻類近縁2種間の異なる塩濃度条件における比較RNA-seq解析2014

    • Author(s)
      正清友香・市原健介・小倉淳・嶌田智
    • Organizer
      第13回日本植物分類学会
    • Place of Presentation
      熊本大学
    • Year and Date
      2014-03-21
    • Related Report
      2013 Annual Research Report
  • [Presentation] 緑藻アオサ属藻類近縁2種間の異なる塩濃度条件における比較RNA-seq解析2014

    • Author(s)
      正清友香・市原健介・小倉淳・嶌田智
    • Organizer
      第38回日本藻類学会
    • Place of Presentation
      東邦大学
    • Year and Date
      2014-03-16
    • Related Report
      2013 Annual Research Report
  • [Presentation] 緑藻アオサ属藻類近縁2種間の異なる塩濃度条件における比較RNA-seq解析2014

    • Author(s)
      正清友香・市原健介・小倉淳・嶌田智
    • Organizer
      第61回日本生態学会
    • Place of Presentation
      広島国際会議場
    • Year and Date
      2014-03-15
    • Related Report
      2013 Annual Research Report
  • [Presentation] 種とは?-緑藻アオノリの場合-2011

    • Author(s)
      永野萌, ほか
    • Organizer
      第75回日本植物学会
    • Place of Presentation
      東京
    • Year and Date
      2011-09-18
    • Related Report
      2011 Annual Research Report
  • [Presentation] 淡水産アオノリUlva limneticaを用いた淡水誘導性遺伝子の単離と発現解析2010

    • Author(s)
      市原健介・嶌田智
    • Organizer
      第74回日本植物学会
    • Place of Presentation
      名古屋
    • Year and Date
      2010-09-10
    • Related Report
      2010 Annual Research Report
  • [Presentation] 種とは? ―緑藻アオノリの場合―

    • Author(s)
      永野萌・松下範久・宝月岱造・平岡雅規・嶌田智
    • Organizer
      第36回日本藻類学会
    • Place of Presentation
      札幌
    • Related Report
      2012 Annual Research Report
  • [Presentation] 緑藻「ボタンアオサ」は存在するか?

    • Author(s)
      松本薫・嶌田智
    • Organizer
      第36回日本藻類学会
    • Place of Presentation
      札幌
    • Related Report
      2012 Annual Research Report
  • [Presentation] 比較RNAseq による緑藻アオサ類の淡水適応メカニズムの解析

    • Author(s)
      嶌田智・正清友香・市原健介・小倉淳
    • Organizer
      第36回日本藻類学会
    • Place of Presentation
      札幌
    • Related Report
      2012 Annual Research Report
  • [Presentation] 別種とされてきたアオサ2種にみられる遺伝的交流

    • Author(s)
      永野萌・松下範久・宝月岱造・平岡雅規・嶌田智
    • Organizer
      第76回日本植物学会
    • Place of Presentation
      姫路
    • Related Report
      2012 Annual Research Report
  • [Presentation] 比較RNAseq による緑藻アオサ類の淡水適応メカニズムの解析

    • Author(s)
      正清友香・市原健介・小倉淳・嶌田智
    • Organizer
      第76回日本植物学会
    • Place of Presentation
      姫路
    • Related Report
      2012 Annual Research Report
  • [Presentation] 近縁なアオサ2種にみられる遺伝子流動

    • Author(s)
      永野萌・岩崎貴也・松下範久・宝月岱造・平岡雅規・嶌田智
    • Organizer
      第12回日本植物分類学会
    • Place of Presentation
      千葉
    • Related Report
      2012 Annual Research Report
  • [Presentation] DNA分析によるアオノリ製品の原料種推定と属レベルでの簡易スクリーニング法の開発

    • Author(s)
      河嶋優美・赤﨑哲也・松本啓嗣・山﨑幸彦・嶌田智
    • Organizer
      第36回日本藻類学会
    • Place of Presentation
      札幌
    • Related Report
      2012 Annual Research Report
  • [Presentation] 日本産アオサ属藻類の種多様性

    • Author(s)
      正清友香・堀本理華・内村真之・寺田竜太・嶌田智
    • Organizer
      第36回日本藻類学会
    • Place of Presentation
      札幌
    • Related Report
      2012 Annual Research Report

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Published: 2010-08-23   Modified: 2019-07-29  

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