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A novel function of RNA in the regulation of chromatin structure

Research Project

Project/Area Number 22570132
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Functional biochemistry
Research InstitutionUniversity of Tsukuba

Principal Investigator

OKUWAKI Mitsuru  筑波大学, 医学医療系, 准教授 (50322699)

Project Period (FY) 2010 – 2012
Project Status Completed (Fiscal Year 2012)
Budget Amount *help
¥4,550,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥1,050,000)
Fiscal Year 2012: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2011: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2010: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Keywordsクロマチン / 核小体 / リボソーム / RNP複合体 / RNA / ヒストンシャペロン / 遺伝子 / 細胞核 / Nucleophosmin
Research Abstract

The aim of this study was to identify RNA molecules involved in chromatin regulation by focusing on RNA-binding histone chaperone Nucleophosmin/B23. We found that B23 was recruited to the rRNA gene loci by using its RNA binding activity. In addition, we clarified the molecular mechanism by which B23 binds to specific RNA target. Furthermore, we identified RNA molecules specifically bound by B23 in vivo. This study will contribute to understand the regulation mechanism of chromatin structure.

Report

(4 results)
  • 2012 Annual Research Report   Final Research Report ( PDF )
  • 2011 Annual Research Report
  • 2010 Annual Research Report
  • Research Products

    (52 results)

All 2013 2012 2011 2010 Other

All Journal Article (5 results) (of which Peer Reviewed: 5 results) Presentation (44 results) (of which Invited: 1 results) Book (1 results) Remarks (2 results)

  • [Journal Article] B23/Nucleophosmin is involved in regulation of adenovirus chromatin structure at late infection stages, but not in its replication and transcription2012

    • Author(s)
      Abdus MD.Samad, et al
    • Journal Title

      Journal of General Virology

      Volume: (In press) Issue: 6 Pages: 1328-1338

    • DOI

      10.1099/vir.0.036665-0

    • Related Report
      2012 Annual Research Report 2012 Final Research Report 2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Functions of homo- and hetero-oligomers of human Nucleoplasmin/Nucleophosmin family proteins NPM1, NPM2, and NPM3 during sperm chromatin remodeling2012

    • Author(s)
      Okuwaki M, Sumi A, Hisaoka M, Saotome-Nakamura A, Akashi S, Nishimura Y, Nagata K
    • Journal Title

      Nucleic Acids Res

      Volume: 40 Issue: 11 Pages: 4861-4878

    • DOI

      10.1093/nar/gks162

    • Related Report
      2012 Annual Research Report 2012 Final Research Report 2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Role of Template Activating Factor-I as a chaperone in linker histone dynamics2011

    • Author(s)
      Kato K, Okuwaki M, Nagata K
    • Journal Title

      J Cell Sci

      Volume: 124(Pt 19) Issue: 19 Pages: 3254-65

    • DOI

      10.1242/jcs.083139

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Regulation of nucleolar chromatin by B23/nucleophosmin jointly depends upon its RNA binding activity and transcription factor UBF2010

    • Author(s)
      Hisaoka M, Ueshima S, Murano K, Nagata K, Okuwaki M
    • Journal Title

      Mol Cell Biol

      Volume: 30(20) Issue: 20 Pages: 4952-64

    • DOI

      10.1128/mcb.00299-10

    • NAID

      120007137916

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Regulation of nucleolar chromatin by B23/Nucleophosmin jointly depends upon its RNA binding activity and transcription factor UBF2010

    • Author(s)
      Miharu Hisaoka
    • Journal Title

      Molecular and Cellular Biology

      Volume: 30 Pages: 4952-4964

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Presentation] 核小体タンパク質Nucleophosmin/B23 のRNA結合特性の解析2013

    • Author(s)
      久岡美晴、永田恭介、奥脇暢
    • Organizer
      第2回リボソームミーティング
    • Place of Presentation
      東京農工大学、東京
    • Year and Date
      2013-03-29
    • Related Report
      2012 Final Research Report
  • [Presentation] 核小体形成におけるRNP 複合体の核小体クロマチンへの集合機構2013

    • Author(s)
      上島州平、永田恭介、奥脇暢
    • Organizer
      第2回リボソームミーティング
    • Place of Presentation
      東京農工大学、東京
    • Year and Date
      2013-03-29
    • Related Report
      2012 Final Research Report
  • [Presentation] Formation and maintenance of the nucleolus by RNA and RNA binding proteins2013

    • Author(s)
      Mitsuru Okuwaki
    • Organizer
      The 2nd Meeting on RNA and Biofunctions-ASIA Study
    • Place of Presentation
      レオパレスホテル、福岡市
    • Year and Date
      2013-01-09
    • Related Report
      2012 Final Research Report
  • [Presentation] 核小体タンパク質Nucleophosmin/B23のRNA結合特性の解析2013

    • Author(s)
      久岡美晴
    • Organizer
      第2回リボソームミーティング
    • Place of Presentation
      東京農工大学
    • Related Report
      2012 Annual Research Report
  • [Presentation] 核小体形成におけるRNP複合体の核小体クロマチンへの集合機構2013

    • Author(s)
      上島州平
    • Organizer
      第2回リボソームミーティング
    • Place of Presentation
      東京農工大学
    • Related Report
      2012 Annual Research Report
  • [Presentation] 核小体形成におけるRNAとRNA 結合タンパク質の協調的な働き2012

    • Author(s)
      奥脇 暢
    • Organizer
      第30回染色体ワークショップ・第11回核ダイナミクス研究会
    • Place of Presentation
      淡路夢舞台国際会議場、兵庫
    • Year and Date
      2012-12-19
    • Related Report
      2012 Final Research Report
  • [Presentation] Maintenance of the nucleolar structure by acidic RNA binding proteins2012

    • Author(s)
      Mitsuru Okuwaki
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡国際会議場、福岡
    • Year and Date
      2012-12-11
    • Related Report
      2012 Final Research Report
  • [Presentation] Interaction between H2A/H2B heterodimer and the acidic domain of histone chaperone hNap12012

    • Author(s)
      Moriwaki Yoshihito, Mitsuru Okuwaki, Kyosuke Nagata, Yasuto Todokoro, Masahiko Sato, Aritaka Nagadoi, Yoshifumi Nishimura
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡国際会議場、福岡
    • Year and Date
      2012-12-11
    • Related Report
      2012 Final Research Report
  • [Presentation] Assembly and maintenance of the nucleolar structure by RNA and RNA binding proteins2012

    • Author(s)
      Mitsuru Okuwaki
    • Organizer
      Human Biology Symposium-Biology and Regenerative Medicine
    • Place of Presentation
      つくば国際会議場、茨城
    • Year and Date
      2012-10-31
    • Related Report
      2012 Final Research Report
  • [Presentation] ヒストンシャペロンによる核小体クロマチンの制御2012

    • Author(s)
      早乙女愛、久岡美晴、永田恭介、奥脇暢
    • Place of Presentation
      広島大学、広島
    • Year and Date
      2012-03-16
    • Related Report
      2012 Final Research Report
  • [Presentation] 天然変性タンパク質Nucleolin による核小体クロマチン制御機構2012

    • Author(s)
      早乙女愛、奥脇暢
    • Organizer
      第2回新学術領域「天然変性タンパク質の分子認識機構と機能発現」公開シンポジウム
    • Place of Presentation
      千里ライフサイエンスセンター 大阪
    • Year and Date
      2012-01-24
    • Related Report
      2012 Final Research Report
  • [Presentation] 分子間・分子内相互作用による核小体ヒストンシャペロンNPM1 のRNA 結合活性の制御2012

    • Author(s)
      奥脇暢
    • Organizer
      第2回新学術領域「天然変性タンパク質の分子認識機構と機能発現」公開シンポジウム
    • Place of Presentation
      千里ライフサイエンスセンター 大阪
    • Year and Date
      2012-01-24
    • Related Report
      2012 Final Research Report
  • [Presentation] 分子間・分子内相互作用による核小体ヒストンシャペロンNPM1のRNA結合活性の制御2012

    • Author(s)
      奥脇暢
    • Organizer
      第2回新学術領域「天然変性タンパク質の分子認識機構と機能発現」公開シンポジウム
    • Place of Presentation
      千里ライフサイエンスセンター
    • Year and Date
      2012-01-24
    • Related Report
      2011 Annual Research Report
  • [Presentation] 天然変性タンパク質Nucleolinによる核小体クロマチン制御機構2012

    • Author(s)
      早乙女愛
    • Organizer
      第2回新学術領域「天然変性タンパク質の分子認識機構と機能発現」公開シンポジウム
    • Place of Presentation
      千里ライフサイエンスセンター
    • Year and Date
      2012-01-24
    • Related Report
      2011 Annual Research Report
  • [Presentation] 核小体形成におけるRNAとRNA結合タンパク質の協調的な働き2012

    • Author(s)
      奥脇暢
    • Organizer
      第30回染色体ワークショップ・第11回核ダイナミクス研究会
    • Place of Presentation
      淡路夢舞台国際会議場
    • Related Report
      2012 Annual Research Report
  • [Presentation] Interaction between H2A/H2B heterodimer and the acidic domain of histone chaperone hNap12012

    • Author(s)
      Moriwaki Yoshihiro
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡国際会議場
    • Related Report
      2012 Annual Research Report
  • [Presentation] Maintenance of the nucleolar structure by acidic RNA binding proteins2012

    • Author(s)
      Mitsuru Okuwaki
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡国際会議場
    • Related Report
      2012 Annual Research Report
  • [Presentation] Function of homo- andhetero-oligomers of humanNucleophosmin/Nucleoplasmin familyproteins, NPM1, NPM2, and NPM3in sperm chromatin remodeling2011

    • Author(s)
      Mitsuru Okuwaki, Ayako Sumi, Kyosuke Nagata
    • Organizer
      第34回日本分子生物学会年会
    • Year and Date
      2011-12-14
    • Related Report
      2012 Final Research Report
  • [Presentation] Intramolecular regulation of the RNA binding activity of nucleolar protein nucleophosmin/B232011

    • Author(s)
      Miharu Hisaoka, Kyosuke Nagata, Mitsuru Okuwaki
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横
    • Year and Date
      2011-12-14
    • Related Report
      2012 Final Research Report
  • [Presentation] Nopp140 regulates rRNA production in both RNA -dependent and -independent manners2011

    • Author(s)
      Ueshima Shuhei, Kyosuke Nagata, Mitsuru Okuwaki
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2011-12-14
    • Related Report
      2012 Final Research Report
  • [Presentation] Nopp140 regulates rRNA production in both RNA dependent and -independent manners2011

    • Author(s)
      上島州平
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2011-12-14
    • Related Report
      2011 Annual Research Report
  • [Presentation] Function of homo- and hetero-oligomers of human Nucleophosmin/Nucleoplasmin family proteins, NPM1, NPM2, and NPM3 in sperm chromatin remodeling2011

    • Author(s)
      奥脇暢
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2011-12-14
    • Related Report
      2011 Annual Research Report
  • [Presentation] Intramolecular regulation of the RNA binding activity of nucleolar protein nucleophosmin/B232011

    • Author(s)
      久岡美晴
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2011-12-14
    • Related Report
      2011 Annual Research Report
  • [Presentation] ヒストンH1結合因子によるクロマチン動態制御機構2011

    • Author(s)
      加藤広介、奥脇暢、永田恭介
    • Organizer
      核ダイナミクス研究会
    • Year and Date
      2011-10-26
    • Related Report
      2012 Final Research Report
  • [Presentation] ヒストンH1結合因子によるクロマチン動態制御機構2011

    • Author(s)
      加藤広介
    • Organizer
      核ダイナミクス研究会
    • Place of Presentation
      札幌
    • Year and Date
      2011-10-26
    • Related Report
      2011 Annual Research Report
  • [Presentation] RNA-mediated chromatin association of a nucleolar histone chaperone NucleolinRNA-mediated chromatin association of a nucleolar histone chaperone Nucleolin2011

    • Author(s)
      Ai Saotome and Mitsuru Okuwaki
    • Organizer
      EMBO Workshop Nuclear Structure and Dynamics
    • Place of Presentation
      Isle sur la Sorgue, France
    • Year and Date
      2011-09-30
    • Related Report
      2012 Final Research Report 2011 Annual Research Report
  • [Presentation] 熱帯熱マラリア原虫pf1-cys-prx 遺伝子cis-element に結合する新奇核内因子の同定およびその性状の解析2011

    • Author(s)
      駒木-安田加奈子、奥脇暢、永田恭介、河津信一郎、狩野繁之
    • Organizer
      日本寄生虫学会年会
    • Place of Presentation
      東京慈恵会医科大学、東京
    • Year and Date
      2011-07-19
    • Related Report
      2012 Final Research Report
  • [Presentation] 熱帯熱マラリア原虫pf1-cys-prx遺伝子cis-elementに結合する新奇核内因子の同定およびその性状の解析2011

    • Author(s)
      駒木-安田加奈子
    • Organizer
      第80回日本寄生虫学会総会
    • Place of Presentation
      東京
    • Year and Date
      2011-07-19
    • Related Report
      2011 Annual Research Report
  • [Presentation] Histone H1 chaperone-dependent histone H1 dynamics and transcriptional regulation2011

    • Author(s)
      Kohsuke Kato
    • Organizer
      Interational Symposium on the Physicochemical Field for Genetic Activities
    • Place of Presentation
      兵庫県
    • Year and Date
      2011-01-24
    • Related Report
      2010 Annual Research Report
  • [Presentation] 核小体ヒストンシャペロンNucleolinのRNAによる機能制御機構2010

    • Author(s)
      早乙女愛
    • Organizer
      第33回日本分子生物学会
    • Place of Presentation
      兵庫県神戸市
    • Year and Date
      2010-12-10
    • Related Report
      2010 Annual Research Report
  • [Presentation] 核小体ヒストンシャペロンNucleolinのRNAによる機能制御機構2010

    • Author(s)
      早乙女愛、奥脇暢
    • Organizer
      第33回日本分子生物学会
    • Place of Presentation
      神戸国際会議場、神戸
    • Year and Date
      2010-12-07
    • Related Report
      2012 Final Research Report
  • [Presentation] 核小体形成の生化学的解析2010

    • Author(s)
      奥脇暢、上島州平、永田恭介
    • Organizer
      第33回日本分子生物学会
    • Place of Presentation
      神戸国際会議場、神戸
    • Year and Date
      2010-12-07
    • Related Report
      2012 Final Research Report
  • [Presentation] TAF-I is a linker histone chaperone in the mammalian somatic cell nucleus2010

    • Author(s)
      Kohsuke Kato, Mitsuru Okuwaki, Kyosuke Nagata
    • Organizer
      第33回日本分子生物学会
    • Place of Presentation
      神戸国際会議場、神戸
    • Year and Date
      2010-12-07
    • Related Report
      2012 Final Research Report
  • [Presentation] 核小体形成の生化学的解析2010

    • Author(s)
      奥脇暢
    • Organizer
      第33回日本分子生物学会
    • Place of Presentation
      兵庫県神戸市
    • Year and Date
      2010-12-07
    • Related Report
      2010 Annual Research Report
  • [Presentation] TAF-I is a linker histone chaperone in the mammalian somatic cell nucleus2010

    • Author(s)
      Kohsuke Kato
    • Organizer
      第33回日本分子生物学会
    • Place of Presentation
      兵庫県神戸市
    • Year and Date
      2010-12-07
    • Related Report
      2010 Annual Research Report
  • [Presentation] Nucleolar Chromatin Regulation by B23/Nucleophosmin depends upon its RNA binding activity and transcription factor UBF.2010

    • Author(s)
      Miharu Hisaoka, Mitsuru Okuwaki, Shuhei Ueshima, Kensaku Murano, Kyosuke Nagata
    • Organizer
      9thEMBL conference : Transcription and Chromatin
    • Place of Presentation
      Heidelberg, Germany
    • Year and Date
      2010-08-29
    • Related Report
      2012 Final Research Report
  • [Presentation] TAF-I, a novel somatic linker histone chaperone, is involved in chromatin dynamics2010

    • Author(s)
      Kohsuke Kato, Mitsuru Okuwaki, Kyosuke Nagata
    • Organizer
      9th EMBL conference : Transcription and Chromatin
    • Place of Presentation
      Heidelberg, Germany
    • Year and Date
      2010-08-29
    • Related Report
      2012 Final Research Report
  • [Presentation] Nucleolar chromatin regulation by B23/nucleophosmin depends upon its RNA binding activity and transcription factor UBF2010

    • Author(s)
      Miharu Hisaoka
    • Organizer
      9^<th> EMBL conference : Transcription and chromatin
    • Place of Presentation
      ドイツ・ハイデルベルグ
    • Year and Date
      2010-08-29
    • Related Report
      2010 Annual Research Report
  • [Presentation] TAF-I, a novel somatic linker histone chaperone, is involved in chromatin dynamics2010

    • Author(s)
      Kohsuke Kato
    • Organizer
      9^<th> EMBL conference : Transcription and chromatin
    • Place of Presentation
      ドイツ・ハイデルベルグ
    • Year and Date
      2010-08-29
    • Related Report
      2010 Annual Research Report
  • [Presentation] Function of Upstream Binding Factor in the Organization of Nucleolus2010

    • Author(s)
      Mitsuru Okuwaki
    • Organizer
      Wellcome Trust Scientific Conference, Sub-nuclear Structure and Functions
    • Place of Presentation
      Cambridge, UK
    • Year and Date
      2010-07-28
    • Related Report
      2012 Final Research Report
  • [Presentation] Function of Upstream Binding Factor in the Organization of Nucleolus2010

    • Author(s)
      Mitsuru Okuwaki
    • Organizer
      Wellcome Trust Scientific Conference, Sub-nuclear Structure and Fucntions
    • Place of Presentation
      英国・ケンブリッジ
    • Year and Date
      2010-07-28
    • Related Report
      2010 Annual Research Report
  • [Presentation] RNAによるヒストンシャペロンNucleolin (NCL) の機能制御2010

    • Author(s)
      早乙女愛、奥脇暢
    • Organizer
      第9回核ダイナミクス研究会
    • Place of Presentation
      ラフォーレ修善寺、静岡
    • Year and Date
      2010-05-28
    • Related Report
      2012 Final Research Report
  • [Presentation] RNAによるヒストンシャペロンNucleolin(NCLI)の機能制御2010

    • Author(s)
      早乙女愛
    • Organizer
      第9回核ダイナミクス研究会
    • Place of Presentation
      静岡県修善寺
    • Year and Date
      2010-05-28
    • Related Report
      2010 Annual Research Report
  • [Presentation] Assembly and maintenance of the nucleolar structure by RNA and RNA binding proteins

    • Author(s)
      Mitsuru Okuwaki
    • Organizer
      Human Biology Symposium-Biology and Regenerative Medicine
    • Place of Presentation
      つくば国際会議場
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Book] タンパク質発現プロトコール2010

    • Author(s)
      奥脇暢 永田恭介
    • Total Pages
      268
    • Publisher
      羊土社
    • Related Report
      2012 Final Research Report
  • [Remarks]

    • URL

      http://www.md.tsukuba.ac.jp/younginit/okuwaki/Oku1/Top.html

    • Related Report
      2012 Final Research Report
  • [Remarks]

    • URL

      http://www.md.tsukuba.ac.jp/younginit/okuwaki/Okul/Top.html

    • Related Report
      2011 Annual Research Report

URL: 

Published: 2010-08-23   Modified: 2019-07-29  

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