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Investigation of GPCRs interacting with RAMPs an functional analysis of their complex.

Research Project

Project/Area Number 22570175
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Molecular biology
Research InstitutionOsaka University (2012)
The Institute of Physical and Chemical Research (2010-2011)

Principal Investigator

HINO Nobumasa  大阪大学, 大学院・薬学研究科, 助教 (90469916)

Project Period (FY) 2010 – 2012
Project Status Completed (Fiscal Year 2012)
Budget Amount *help
¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2012: ¥650,000 (Direct Cost: ¥500,000、Indirect Cost: ¥150,000)
Fiscal Year 2011: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2010: ¥2,470,000 (Direct Cost: ¥1,900,000、Indirect Cost: ¥570,000)
Keywordsタンパク質間相互作用 / 膜タンパク質 / 光クロスリンク / 非天然型アミノ酸 / 質量分析 / RAMP / GPCR / プロテオミクス / 非天然アミノ酸 / クロスリンク / 拡張遺伝暗号 / RAMP1 / SILAC法
Research Abstract

(I) I developed a system for the identification of proteins interacting with a given target protein, by site-specific incorporation of a photo-reactive amino acid into the target protein, in vivo photo-cross-linking to interacting proteins, and identification of thus captured proteins by comparative quantitative mass spectrometry analysis. A novel long chain photoreactive amino acid was alsosuccessfully incorporated into proteins, which enables wide-range photo-cross-linking of proteins.
(II) I showed how RAMP and calcitonin receptor-like receptor interact with each other on the membrane of living cells by X-ray crystal structure analysis and site-specific photo-cross-linking assay.

Report

(4 results)
  • 2012 Annual Research Report   Final Research Report ( PDF )
  • 2011 Annual Research Report
  • 2010 Annual Research Report
  • Research Products

    (22 results)

All 2012 2011 2010 Other

All Journal Article (13 results) (of which Peer Reviewed: 12 results) Presentation (4 results) Remarks (3 results) Patent(Industrial Property Rights) (2 results)

  • [Journal Article] Tetrameric interaction of the ectoenzyme CD38 on the cell surface enables its catalytic and raft-association activities2012

    • Author(s)
      Hara-Yokoyama M., Kukimoto-Niino M., Terasawa K., Harumiya S., Podyma-Inoue K. A., Hino N., Sakamoto K., Itoh S., Hashii N., Hiruta Y., Kawasaki N., Mishima-Tsumagari C., Kaitsu Y., Matsumoto T., Wakiyama M., Shirouzu M., Kasama T., Ta
    • Journal Title

      Structure

      Volume: 20 Issue: 9 Pages: 1585

    • DOI

      10.1016/j.str.2012.06.017

    • Related Report
      2012 Annual Research Report 2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Structural basis of interleukin-5 dimer recognition by its alpha receptor2012

    • Author(s)
      Kusano S., Kukimoto-Niino M., Hino N., Ohsawa N., Ikutani M., Takaki S., Sakamoto K., Hara-Yokoyama M., Shirouzu M., Takatsu K., Yokoyama S
    • Journal Title

      Protein Sci

      Volume: 21 Issue: 6 Pages: 850-864

    • DOI

      10.1002/pro.2072

    • Related Report
      2012 Annual Research Report 2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Wade-range protein photo-crosslinking achieved by a genetically encoded N^ε-(benzyloxycarbonyl) lysine derivative with a diazirinyl moiety2012

    • Author(s)
      T. Yanagisawa, N. Hino, F. Iraha, T. Mukai, K. Sakamoto, S. Yokoyama
    • Journal Title

      Mol. Bio Syst.

      Volume: 8 Issue: 4 Pages: 1131-1135

    • DOI

      10.1039/c2mb05321g

    • Related Report
      2012 Annual Research Report 2012 Final Research Report 2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Structural basis for extracellular interactions between calcitonin receptor-like receptor and receptor activity-modifying protein 2 for adrenomedullin-specific binding2012

    • Author(s)
      Kusano S., Kukimoto-Niino M., Hino N., Ohsawa N., Okuda K., Sakamoto K., Shirouzu M., Shindo T., Yokoyama S
    • Journal Title

      Protein Sci

      Volume: 21 Issue: 2 Pages: 199-210

    • DOI

      10.1002/pro.2003

    • Related Report
      2012 Final Research Report 2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Site-specific incorporation of unnatural amino acids into proteins in mammalian cells2012

    • Author(s)
      Hino N., Sakamoto K., Yokoyama S
    • Journal Title

      Methods Mol. Biol

      Volume: 794 Pages: 215-228

    • DOI

      10.1007/978-1-61779-331-8_13

    • ISBN
      9781617793301, 9781617793318
    • Related Report
      2012 Final Research Report 2011 Annual Research Report
  • [Journal Article] Genetic incorporation of a photo-crosslinkable amino acid reveals novel protein complexes with GRB2 in mammalian cells2011

    • Author(s)
      Hino N., Oyama M., Sato A., Mukai T., Iraha F., Hayashi A., Kozuka-Hata H., Yamamoyo T., Yokoyama S., Sakamoto K
    • Journal Title

      J. Mol. Biol.

      Volume: 406 Issue: 2 Pages: 343-353

    • DOI

      10.1016/j.jmb.2010.12.022

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Dissecting Cell Signaling Pathways with Genetically Encoded 3-Iodo-L-tyrosine2011

    • Author(s)
      Hayashi A., Hino N., Kobayashi T., Arai R., Shirouzu M., Yokoyama S., Sakamoto K
    • Journal Title

      ChemBioChem

      Volume: 12 Issue: 3 Pages: 387-389

    • DOI

      10.1002/cbic.201000665

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Crystallographic study of a site-specifically crosslinked protein complex with a genetically incorporated photo-reactive amino acid2011

    • Author(s)
      Sato S., Mimasu S., Sato A., Hino N., Sakamoto K., Umehara T., Yokoyama S.
    • Journal Title

      Biochemistry

      Volume: 50 Pages: 250-257

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Genetic Incorporation of a Photo-Crosslinkable Amino Acid Reveals Novel Protein Complexes with GRB2 in Mammalian Cells.2011

    • Author(s)
      樋野展正、尾山大明、佐藤文、向井崇人、伊良波史枝、林明子、秦裕子、山本雅、横山茂之、坂本健作
    • Journal Title

      Journal of molecular biology

      Volume: 406 Pages: 343-353

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Crystallographic Study of a Site-Specifically Cross-Linked Protein Complex with a Genetically Incorporated Photoreactive Amino Acid.2011

    • Author(s)
      佐藤心、三桝信哉、佐藤文、樋野展正、坂本健作、梅原崇史、横山茂之
    • Journal Title

      Biochemistry

      Volume: 50 Pages: 250-257

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Dissecting Cell Signaling Pathways with Genetically Encoded 3-Iodo-L-tyrosine.2011

    • Author(s)
      林明子、樋野展正、小林隆嗣、新井亮一、白水美香子、横山茂之、坂本健作
    • Journal Title

      Chembiochem

      Volume: 12 Pages: 387-389

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Crystal structure of bacterial RNA polymerase bound with a transcription inhibitor protein2010

    • Author(s)
      Tagami S., Sekine S., Kumarevel T., Hino N., Murayama Y., Kamegamori S., Yamamoto M., Sakamoto K., Yokoyama S.
    • Journal Title

      Nature

      Volume: 468 Issue: 7326 Pages: 978-982

    • DOI

      10.1038/nature09573

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Crystal structure of bacterial RNA polymerase bound with a transcription inhibitor protein.2010

    • Author(s)
      田上俊輔、関根俊一、Thirumananseri Kumarevel、樋野展正、村山祐子、亀ヶ盛俊介、山本雅貴、坂本健作、横山茂之
    • Journal Title

      Nature

      Volume: 468 Pages: 978-982

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Presentation] インターロイキン-5受容体α鎖による2量体インターロイキン-5認識の構造的基盤2012

    • Author(s)
      草野清輔,新野睦子,樋野展正,大沢登,生谷尚士,高木智,坂本健作,横山三紀,白水美香子,高津聖志,横山茂之
    • Organizer
      第12回日本蛋白質科学会年会
    • Place of Presentation
      名古屋
    • Related Report
      2012 Final Research Report
  • [Presentation] 新たなクロスリンカー含有非天然型アミノ酸のタンパク質への部位特異的導入と,その広域性光クロスリンク能2012

    • Author(s)
      柳沢達男, 樋野展正, 伊良波史枝, 向井崇人, 坂本健作, 横山茂之
    • Organizer
      第14回日本RNA学会年会
    • Place of Presentation
      仙台
    • Related Report
      2012 Final Research Report
  • [Presentation] ジアジリン含有ベンジルオキシカルボニルリジン誘導体のタンパク質への部位特異的導入と広域性光クロスリンク能2012

    • Author(s)
      柳沢達男,樋野展正, 伊良波史枝, 向井崇人, 坂本健作, 横山茂之
    • Organizer
      日本ケミカルバイオロジー学会第七回年会
    • Place of Presentation
      京都
    • Related Report
      2012 Final Research Report
  • [Presentation] RNAポリメラーゼの新規コンフォメーション状態2010

    • Author(s)
      田上俊輔, 関根俊一, Thirumananseri Kumarevel, 樋野展正, 村上裕子, 亀ヶ盛俊介, 山本雅貴, 坂本健作, 横山茂之
    • Organizer
      第12回日本RNA学会年会
    • Related Report
      2012 Final Research Report
  • [Remarks]

    • URL

      http://www.phs.osaka-u.ac.jp/homepage/b018/

    • Related Report
      2012 Final Research Report
  • [Remarks]

    • URL

      http://protein.gsc.riken.jp/sakamoto/

    • Related Report
      2011 Annual Research Report
  • [Remarks]

    • URL

      http://protein.gsc.rikeni.jp/sakamoto/

    • Related Report
      2010 Annual Research Report
  • [Patent(Industrial Property Rights)] 新規な非天然タンパク質及びその利用(N-(p-trifluoromethyldiazirinylbenzyloxycarbonyl)-lysine)2011

    • Inventor(s)
      坂本健作,柳沢達男,樋野展正,伊良波史枝,横山茂之
    • Industrial Property Rights Holder
      理化学研究所
    • Filing Date
      2011-11-18
    • Related Report
      2012 Final Research Report
  • [Patent(Industrial Property Rights)] 新規な非天然タンパク質、及びその利用(N-(p-trifluoromethyldiazirinylbenzyloxycarbonyl)-lysine)2011

    • Inventor(s)
      坂本健作、柳沢達男、樋野展正、伊良波史枝、横山茂之
    • Industrial Property Rights Holder
      理化学研究所
    • Filing Date
      2011-11-18
    • Related Report
      2011 Annual Research Report

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Published: 2010-08-23   Modified: 2019-07-29  

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