• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Comparative genetical analysis among South American indigenous populations

Research Project

Project/Area Number 22570231
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Applied anthropology
Research InstitutionThe Institute of Physical and Chemical Research

Principal Investigator

DANJO Inaho  独立行政法人理化学研究所, 細胞材料開発室, 協力研究員 (30415228)

Project Period (FY) 2010 – 2012
Project Status Completed (Fiscal Year 2012)
Budget Amount *help
¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2012: ¥650,000 (Direct Cost: ¥500,000、Indirect Cost: ¥150,000)
Fiscal Year 2011: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2010: ¥2,470,000 (Direct Cost: ¥1,900,000、Indirect Cost: ¥570,000)
Keywords南米 / 先住民族 / 少数民族 / B-LCL / B細胞株 / ゲノム解析 / マイクロサテライト / アレイCGH / リソース
Research Abstract

We established B lymphoblastoid cell lines (EBV-B cell) from peripheral blood mononuclear cell stocks obtained from 550 South American indigenous individuals. We performed analysis of genetical relationships among tribes to make clear the migration rout of mongoloid populations from Eurasia to South America. Before starting genetical analysis, we checked the genomic stability of EBV-B cells during establishment and long-term culture periods, and showed that the cells retain stable genome structures by genetical studies. For the genetical analysis, samples were divided into 5 groups according to the geographical location, and then figured out the genetical features with forensic microsatellite markers. The results showed that each group retained smaller heterogeneity and specific allele frequency patterns for each microsatellite locus. These results suggest that Amerind populations are not so homogenous as a whole but can be divided into some genetically-diverse groups.

Report

(4 results)
  • 2012 Annual Research Report   Final Research Report ( PDF )
  • 2011 Annual Research Report
  • 2010 Annual Research Report
  • Research Products

    (28 results)

All 2013 2012 2011 2010 Other

All Journal Article (6 results) (of which Peer Reviewed: 5 results) Presentation (15 results) Book (6 results) Remarks (1 results)

  • [Journal Article] Dominant expansion of a cryptic subclone possessing an abnormal karyotype occurs in B lymphoblastoid cell lines during culture2013

    • Author(s)
      I.Danjoh, R.Shirota, T.Hiroyama, Y. Nakamura
    • Journal Title

      Cytogenetics and Genome Research

      Volume: 139 Pages: 88-96

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Dominant expansion of a cryptic subclone possessing an abnormal karyotype occurs in B lymphoblastoid cell lines during culture.2013

    • Author(s)
      Inaho Danjoh
    • Journal Title

      Cytogenetics and Genome Research

      Volume: 139 Issue: 2 Pages: 88-96

    • DOI

      10.1159/000343757

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Development of a robust method for establishing B cell lines using Epstein-Barr Virus2012

    • Author(s)
      I.Danjoh, H.Sone, R.Shirota, T. Hiroyama, Y.Nakamura
    • Journal Title

      In Vitro Cellular and Developmental Biology - Animal

      Volume: 48 Pages: 393-402

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Development of a robust method for establishing B cell lines using Epstein-Barr Virus.2012

    • Author(s)
      Inaho Danjoh
    • Journal Title

      In Vitro Cellular and Developmental Biology - Animal

      Volume: 48 Issue: 7 Pages: 393-402

    • DOI

      10.1007/s11626-012-9523-y

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The Sonoda-Tajima Cell Collection, a human genetics research resource with emphasis on South American indigenous populations2011

    • Author(s)
      I.Danjoh, K.Saijo, T.Hiroyama, Y. Nakamura
    • Journal Title

      Genome Biology and Evolution

      Volume: 3 Pages: 272-283

    • Related Report
      2012 Final Research Report 2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 理研細胞バンクにおける細胞の品質管理と標準化2010

    • Author(s)
      檀上稲穂、中村幸夫
    • Journal Title

      Tissue Culture Research Communications

      Volume: 29 Pages: 40-41

    • Related Report
      2010 Annual Research Report
  • [Presentation] Development of a robust method for establishing B cell lines using Epstein-Barr Virus2012

    • Author(s)
      I.Danjoh, Y.Nakamura
    • Organizer
      日本癌学会
    • Place of Presentation
      札幌市
    • Related Report
      2012 Final Research Report
  • [Presentation] Development of a robust method for establishing B cell lines using Epstein-Barr Virus2012

    • Author(s)
      I.Danjoh, R.Shirota Y.Nakamura
    • Organizer
      The American Society of Human Genetics Annual Meeting, San Francisco
    • Place of Presentation
      USA
    • Related Report
      2012 Final Research Report
  • [Presentation] Epstein-Barr virusを用いたB細胞株樹立の効率に影響を与える因子の探索2012

    • Author(s)
      檀上稲穂、城田涼子、中村幸夫
    • Organizer
      日本分子生物学会
    • Place of Presentation
      福岡市
    • Related Report
      2012 Final Research Report
  • [Presentation] Development of a robust method for establishing B cell lines using Epstein-Barr Virus.2012

    • Author(s)
      Inaho Danjoh
    • Organizer
      日本癌学会
    • Place of Presentation
      札幌市
    • Related Report
      2012 Annual Research Report
  • [Presentation] evelopment of a robust method for establishing B cell lines using Epstein-Barr Virus.2012

    • Author(s)
      Inaho Danjoh
    • Organizer
      The American Society of Human Genetics Annual Meeting
    • Place of Presentation
      San Francisco, USA
    • Related Report
      2012 Annual Research Report
  • [Presentation] Epstein-Barr virusを用いたB細胞株樹立の効率に影響を与える因子の探索2012

    • Author(s)
      檀上稲穂
    • Organizer
      日本分子生物学会
    • Place of Presentation
      福岡
    • Related Report
      2012 Annual Research Report
  • [Presentation] マイクロサテライトからみた南米少数民族間の遺伝的関係2011

    • Author(s)
      山本敏充、伊藤俊成、五明田匡、西條薫、檀上稲穂、中村幸夫
    • Organizer
      日本人類学会
    • Place of Presentation
      沖縄
    • Year and Date
      2011-11-05
    • Related Report
      2011 Annual Research Report
  • [Presentation] Genetic relationship among ethnic minority groups in South America from the viewpoint of autosomal and Y chromosomal STRs2011

    • Author(s)
      Yamamoto, T., Ito, T., Gomyoda, T., Saijo, K., Danjoh, I., Nakamura, Y.
    • Organizer
      International Congress of Human Genetics
    • Place of Presentation
      Montreal, Canada
    • Year and Date
      2011-10-14
    • Related Report
      2011 Annual Research Report
  • [Presentation] Genomic stability of B lymphoblastoid cell lines established from the Sonoda-Tajima Cell Collection, the collection of South American indigenous populations2011

    • Author(s)
      I.Danjoh, K.Saijo, M.Nagayoshi, Y. Nakamura
    • Organizer
      International Congress of Human Genetics
    • Place of Presentation
      Montreal, Canada
    • Related Report
      2012 Final Research Report 2011 Annual Research Report
  • [Presentation] Family selection study among DNA samples collected from an Amerindianethnic group (Wayuu) in northern Colombia2011

    • Author(s)
      Yamamoto, T., Gomyoda, T., Ito, T., Saijo, K., Danjoh, I., Nakamura, Y.
    • Organizer
      World Congress of the International Society for Forensic Genetics
    • Place of Presentation
      Vienna, Austria(開催期間中ポスター掲示)
    • Related Report
      2011 Annual Research Report
  • [Presentation] Collection of peripheral blood mononuclear cells obtained from Amerindians and other Mongoloid minority groups.2010

    • Author(s)
      Inaho Danjoh, Kaoru Saijo, Kaoru Fukami-Kobayashi, Yukio Nakamura
    • Organizer
      The American Society of Human Genetics Annual Meeting
    • Place of Presentation
      米国ワシントンD.C.
    • Year and Date
      2010-11-04
    • Related Report
      2010 Annual Research Report
  • [Presentation] 理研細胞バンクにおける細胞の品質管理と標準化2010

    • Author(s)
      檀上稲穂、中村幸夫
    • Organizer
      日本組織培養学会
    • Place of Presentation
      岡山市
    • Year and Date
      2010-05-20
    • Related Report
      2010 Annual Research Report
  • [Presentation] 南米モンゴロイド系先住民族コレクションより樹立したB細胞株のゲノム安定性2010

    • Author(s)
      檀上稲穂、西條薫、永吉満利子、中村幸夫
    • Organizer
      日本人類学会
    • Place of Presentation
      北海道伊達市
    • Related Report
      2012 Final Research Report 2010 Annual Research Report
  • [Presentation] Collection of peripheral blood mononuclear cells obtained from Amerindians and other Mongoloid minority groups2010

    • Author(s)
      I.Danjoh, K.Saijo, K.Fukami-Kobayashi, Y.Nakamura
    • Organizer
      The American Society of Human Genetics Annual Meeting
    • Place of Presentation
      Washington D.C. USA
    • Related Report
      2012 Final Research Report
  • [Presentation] 南米モンゴロイド系先住民族コレクションより樹立したB細胞株のゲノム安定性2010

    • Author(s)
      檀上稲穂、西條薫、永吉満利子、中村幸夫
    • Organizer
      日本分子生物学会
    • Place of Presentation
      神戸市
    • Related Report
      2012 Final Research Report 2010 Annual Research Report
  • [Book] がん細胞株・不死化細胞を用いた研究, 目的別で選べる細胞培養プロトコール、中村幸夫編2012

    • Author(s)
      檀上稲穂
    • Publisher
      羊土社
    • Related Report
      2012 Final Research Report
  • [Book] ゲノムインキュベーターとしての細胞を用いた研究, 目的別で選べる細胞培養プロトコール、中村幸夫編2012

    • Author(s)
      檀上稲穂
    • Publisher
      羊土社
    • Related Report
      2012 Final Research Report
  • [Book] Bリンパ芽球様細胞株(B-LCL)-樹立培養方法および維持培養方法, 目的別で選べる細胞培養プロトコール、中村幸夫編2012

    • Author(s)
      檀上稲穂
    • Publisher
      羊土社
    • Related Report
      2012 Final Research Report
  • [Book] 目的別で選べる細胞培養プロトコール2012

    • Author(s)
      檀上稲穂
    • Total Pages
      23
    • Publisher
      羊土社
    • Related Report
      2012 Annual Research Report
  • [Book] Clinical application of molecular diagnosis in cancer, radiation effect, and human diseases2010

    • Author(s)
      K.Hiyama, E.Hiyama, I.Danjoh
    • Publisher
      Public databases useful for molecular diagnosis. Edited by Eiso Hiyama and Keiko Hiyama
    • Related Report
      2012 Final Research Report
  • [Book] Clinical application of molecular diagnosis in cancer, radiation effect, and human diseases2010

    • Author(s)
      Keiko Hiyama, Eiso Hiyama, Inaho Danjoh
    • Publisher
      Research Signpost Press
    • Related Report
      2010 Annual Research Report
  • [Remarks]

    • URL

      http://www.brc.riken.jp/lab/cell/

    • Related Report
      2010 Annual Research Report

URL: 

Published: 2010-08-23   Modified: 2019-07-29  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi