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Structural determination and functional elucidation of novel thiolic glycoconjugates which can form microtube structures

Research Project

Project/Area Number 22580117
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Bioproduction chemistry/Bioorganic chemistry
Research InstitutionYokohama National University

Principal Investigator

TAKEDA Minoru  横浜国立大学, 大学院・工学研究院, 准教授 (40247507)

Co-Investigator(Renkei-kenkyūsha) UEDA Kazuyoshi  横浜国立大学, 大学院・工学研究院, 教授 (40223458)
Project Period (FY) 2010 – 2012
Project Status Completed (Fiscal Year 2012)
Budget Amount *help
¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2012: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2011: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2010: ¥2,860,000 (Direct Cost: ¥2,200,000、Indirect Cost: ¥660,000)
Keywords天然物質化学 / Sphaerotilus natans / 鞘 / チオペプチドグリカン / 蛍光標識化 / 粘質性多糖 / 立体構造予測 / Leptothrix cholodnii / 鞘新生 / マンガン酸化 / マイクロカルチャー / 複合糖質 / 構造決定 / 多糖リアーゼ / Paenibacillus koleovorans
Research Abstract

Terminal elongation of microtubes (sheaths) which are extracellulary produced by filamentous ion-oxidizing bacteria, Sphaerotilus natans and Leptothrix cholodnii, was confirmed by fluorescent microscopy. The sheaths were revealedto be commonly assembled from thiolic glycoconjugates composed of amphoteric glycan coreand dipeptide side chain containing glycine and cysteine. Considering their uniquechemical structures, the sheath-forming thiolic glycoconjugates were proposed to becollectively termed thiopeptidoglucan.

Report

(4 results)
  • 2012 Annual Research Report   Final Research Report ( PDF )
  • 2011 Annual Research Report
  • 2010 Annual Research Report
  • Research Products

    (12 results)

All 2012 2011 2010

All Journal Article (6 results) (of which Peer Reviewed: 6 results) Presentation (6 results)

  • [Journal Article] A spatial relationship between sheath el ongation and cell proliferation in Sphaerotilus natans2012

    • Author(s)
      Minoru Takeda, Takuto Umezu, Yuta Kawasak i, Shoichi Shimura,Keiko Kondo, Koizumi Jun-ichi
    • Journal Title

      Bioscience, Biotechnology, and Biochemistry

      Volume: 76 Pages: 2357-2359

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Conformational analysis of an extracellular polysaccharide produced by Sphaerotilus natans2012

    • Author(s)
      Kondo, K., Takeda, M., Mashima, T., Katahira, M., Koizumi, J., Ueda, K.
    • Journal Title

      Carbohydrate Research

      Volume: 360 Pages: 102-108

    • DOI

      10.1016/j.carres.2012.07.023

    • Related Report
      2012 Annual Research Report 2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Patterns of sheath elongation, cell proliferation, and manganese(II) oxidation in Leptothrix cholodnii2012

    • Author(s)
      Minoru Takeda, Yuta Kawasaki, Takuto Umezu, Shoichi Shimura,Makoto Hasegawa and Jun-ichi Koizumi
    • Journal Title

      Archives of Microbiology

      Volume: 194 Issue: 8 Pages: 667-673

    • DOI

      10.1007/s00203-012-0801-6

    • Related Report
      2012 Final Research Report 2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A Spatial Relationship between Sheath Elongation and Cell Proliferation in <i>Sphaerotilus natans</i>2012

    • Author(s)
      Minoru Takeda
    • Journal Title

      Bioscience, Biotechnology, and Biochemistry

      Volume: 76 Issue: 12 Pages: 2357-2359

    • DOI

      10.1271/bbb.120616

    • NAID

      130004137905

    • ISSN
      0916-8451, 1347-6947
    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Study of a novel glycoconjugate, thiopeptidoglycan, and a novel polysaccharide lyase2011

    • Author(s)
      Kondo, K., Takeda, M., Ejima, W., Kawasaki, Y., Umezu, T., Yamada, M., Koizumi, J., Mashima, T., and Katahira, M.
    • Journal Title

      Internat. J. Biol. Macro mol.

      Volume: 48 Issue: 2 Pages: 256-262

    • DOI

      10.1016/j.ijbiomac.2010.11.009

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Study of a novel glycoconjugate, thiopeptidoglycan, and a novel polysaccharide lyase, thiopeptidoglycan lyase2011

    • Author(s)
      Kondo K, Takeda M, Ejima W, Kawasaki Y, Umezu T, Yamada M, Koizumi J, Mashima T, Katahira M
    • Journal Title

      International Journal of Biological Macromolecules

      Volume: 48 Pages: 256-262

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Presentation] Fluorescent labeling of the sheaths formed by the Sphaerotilus-Leptothrix group of bacteria2011

    • Author(s)
      Yuta Kawasaki, Takuto Umezu, Makoto Hasegawa, Keiko Kondo, Manami Sumikawa, Minoru Takeda
    • Organizer
      International Congress of Bacteriology and Applied Microbiology
    • Place of Presentation
      札幌(札幌コンベンションセンター)
    • Year and Date
      2011-09-08
    • Related Report
      2011 Annual Research Report
  • [Presentation] Leptothrix cholodniiの鞘の蛍光標識化による伸長部位の特定2011

    • Author(s)
      河焙雄太、梅津卓人、武田穣、小泉淳一
    • Organizer
      日本農芸化学会
    • Place of Presentation
      京都(京都女子大学)
    • Year and Date
      2011-03-26
    • Related Report
      2010 Annual Research Report
  • [Presentation] Fluorescent labeling of the sheaths formed by the Sphaerotilus-Leptothrix group of bacteria2011

    • Author(s)
      Yuta Kawasaki, Takuto Umezu, Makoto Hasegawa, Keiko Kondo, Manami Sumikawa, Minoru Takeda
    • Organizer
      International Congress of Bacteriology and AppliedMicrobiology
    • Place of Presentation
      札幌
    • Related Report
      2012 Final Research Report
  • [Presentation] Leptothrix cholodniiの鞘の蛍光標識化による伸長部位の特定2011

    • Author(s)
      河崎雄太、梅津卓人、 武田 穣、小泉淳一
    • Organizer
      日本農芸化学会
    • Place of Presentation
      京都
    • Related Report
      2012 Final Research Report
  • [Presentation] Microtube-forming glycoconjugate of bacterial origin2010

    • Author(s)
      Yamada M, Kondo K, Kawasaki Y, Umezu T, Takeda M, Koizumi J
    • Organizer
      2010 International Symposium on Advanced Biological Engineering
    • Place of Presentation
      中国(北京)
    • Year and Date
      2010-07-24
    • Related Report
      2010 Annual Research Report
  • [Presentation] Microtube-forming glycoconjugate of bacterial origin2010

    • Author(s)
      Mina Yamada, Keiko Kondo, Yuta Kawasaki,Takuto Umezu, Minoru Takeda, Jun-ichi Koizumi
    • Organizer
      2010International Symposium on Advanced Biological Engineering
    • Place of Presentation
      北京
    • Related Report
      2012 Final Research Report

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Published: 2010-08-23   Modified: 2019-07-29  

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