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Ultra high resolution Xray crystallographic study for antibiotic mechanisms of action and resistance

Research Project

Project/Area Number 22590401
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Bacteriology (including Mycology)
Research InstitutionJosai International University

Principal Investigator

NUKAGA Michiyoshi  城西国際大学, 薬学部, 准教授 (20251150)

Co-Investigator(Kenkyū-buntansha) OHUCHI Nozomi  城西国際大学, 環境社会学部, 助教 (20398556)
Co-Investigator(Renkei-kenkyūsha) TANAKA Nobutada  昭和大学, 薬学部, 准教授 (00286866)
HOSHINO Chuji  千葉大学, 薬学研究院, 准教授 (90257220)
BONOMO Robert  Louis Stokes Cleveland Department of Veterans Affairs, オハイオ州、アメリカ合衆国, Professor
Project Period (FY) 2010-04-01 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2013: ¥780,000 (Direct Cost: ¥600,000、Indirect Cost: ¥180,000)
Fiscal Year 2012: ¥780,000 (Direct Cost: ¥600,000、Indirect Cost: ¥180,000)
Fiscal Year 2011: ¥780,000 (Direct Cost: ¥600,000、Indirect Cost: ¥180,000)
Fiscal Year 2010: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Keywords感染症 / 抗生物質 / 酵素 / 蛋白質 / 構造生物学 / β-ラクタマーゼ / X線結晶解析 / 薬剤耐性 / タンパク質
Research Abstract

Carbapenems are one of the most important antibiotics and are used worldwide as "Last Resort". We studied four subjects, which are the inhibition mechanisms of carbapenems to beta-lactamases on the basis of Xray crystallography, as listed below. (1) Carbapenems inhibition mechanism for class C beta-lactamases. (2) Crystal structures of the PenA beta-lactamases from Burkholderia cepacia(PenI) and Burkholderia pseudomallei(PenA). (3) Crystal structure of PenA carbapenemase-avibactam complex. (4) Inhibitor screening of class B beta-lactamases.
We are showing the overview of the research with crystal structures.

Report

(5 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )
  • 2012 Annual Research Report
  • 2011 Annual Research Report
  • 2010 Annual Research Report
  • Research Products

    (21 results)

All 2013 2012 2011 2010

All Journal Article (6 results) (of which Peer Reviewed: 5 results) Presentation (15 results) (of which Invited: 2 results)

  • [Journal Article] β-ラクタマーゼの構造から考える耐性獲得機構、オキシイミノ系およびカルバペネム系β-ラクタム剤を中心に2013

    • Author(s)
      額賀路嘉
    • Journal Title

      日本化学療法学会雑誌

      Volume: Vol.61

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] In- sights intoβ-lactamases from Burkholderia species, two phylogenetically related yet dis- tinct resistance determinants2013

    • Author(s)
      Papp-Wallace KM, Taracila MA, Gatta JA, Ohuchi N., Bonomo R. A., Nukaga M
    • Journal Title

      Journal of Bi- ological Chemistry

      Volume: Vol.288

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] β-ラクタマーゼの構造から考える耐性獲得機構2013

    • Author(s)
      額賀路嘉
    • Journal Title

      化学療法学会雑誌

      Volume: 61 Pages: 479-491

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Insights into β-lactamases from Burkholderia species, two phylogenetically related yet distinct resistance determinants.2013

    • Author(s)
      Krisztina M. Papp-Wallace, Magdalena A. Taracila, Julian A. Gatta, Nozomi Ohuchi, Robert A. Bonomo, and Michiyoshi Nukaga
    • Journal Title

      The Journal of biological chemistry

      Volume: 288 Issue: 26 Pages: 19090-19102

    • DOI

      10.1074/jbc.m113.458315

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 14員環マクロライド抗生物質が核質タンパク性因子の細胞内動態に及ぼす影響2012

    • Author(s)
      懸川友人、古荘論美、額賀路嘉、小澤実香、小嶋文良、吉田ルシア幸子、大室弘美
    • Journal Title

      The Japanese Journal of Antibiotic

      Volume: Vol.65 Pages: 116-120

    • Related Report
      2011 Annual Research Report
  • [Journal Article] Thrombin-stimulated prolifera- tion is mediated by endothelin-1 in cultured rat gingival fibroblasts2010

    • Author(s)
      Ohuchi N, Hayashi K, Iwamoto K, Koike K, Kizawa Y, Nukaga M, Kakegawa T, Mu- rakami H
    • Journal Title

      Fundam. Clin. Phar- macol

      Volume: Vol.16

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Presentation] Studies on the Inactivation of Enterobacter cloacae P99 Class C beta- Lactamases by Carbapenems : Doripenem and Panipenem2013

    • Author(s)
      M. Nukaga, N. Ohuchi, C. Bethel, R. A. Bonomo
    • Organizer
      53th ICAAC (Interscience Conference on Antimicrobial Agents and Chemotherapy)
    • Place of Presentation
      デンバー(コロラド州), USA
    • Related Report
      2013 Final Research Report
  • [Presentation] Studies on the Inactivation of Enterobacter cloacae P99 Class C beta-Lactamases by Carbapenems: Doripenem and Panipenem2013

    • Author(s)
      M. Nukaga1, N. Ohuchi, C. Bethel, R. A. Bonomo
    • Organizer
      53th ICAAC (Interscience Conference on Antimicrobial Agents and Chemotherapy)
    • Place of Presentation
      デンバー、コロラド州、アメリカ合衆国
    • Related Report
      2013 Annual Research Report
  • [Presentation] クラスCβ-ラクタマーゼの構造・反応機構・耐性化メカニズム、シンポジウム;βラクタマーゼ学2012

    • Author(s)
      額賀路嘉
    • Organizer
      第59回日本化学療法学会東日本支部総会
    • Place of Presentation
      お台場、日航ホテル
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] Crystal Structures of the Pen beta-Lactamases of Burkholde- ria cepacia (Bc) and Burkholderia pseudo- mallei (Bp)2012

    • Author(s)
      K. M. Papp-Wallace, R. A. Bonomo, N. Ohuchi, M. Nukaga
    • Organizer
      52th Interscience Conference on Antimicrobial Agents and Chemother- apy(ICAAC), Sept
    • Place of Presentation
      サンフランシスコ, USA
    • Related Report
      2013 Final Research Report
  • [Presentation] The Contribution of Ambler Po- sition P167 in Ceftazidime(TAZ) Resistance in PenI of Burkholderia pseudomallei (Bp)2012

    • Author(s)
      K. M. Papp-Wallace, M. Nukaga, R. A. Bonomo
    • Organizer
      52th Interscience Conference on Antimi- crobial Agents and Chemotherapy(ICAAC), Sept
    • Place of Presentation
      サンフランシスコ, USA
    • Related Report
      2013 Final Research Report
  • [Presentation] The Contribution of Ambler Position P167 in Ceftazidime(TAZ) Resistance in PenI of Burkholderia pseudomallei (Bp)2012

    • Author(s)
      K. M. Papp-Wallace, M. Nukaga, R. A. Bonomo
    • Organizer
      52th ICAAC (Interscience Conference on Antimicrobial Agents and Chemotherapy)
    • Place of Presentation
      サンフランシスコ
    • Related Report
      2012 Annual Research Report
  • [Presentation] Crystal Structures of the Pen beta-Lactamases of Burkholderia cepacia (Bc) and Burkholderia pseudomallei (Bp)2012

    • Author(s)
      K. M. Papp-Wallace, R. A. Bonomo, N. Ohuchi, M. Nukaga
    • Organizer
      52th ICAAC (Interscience Conference on Antimicrobial Agents and Chemotherapy)
    • Place of Presentation
      サンフランシスコ
    • Related Report
      2012 Annual Research Report
  • [Presentation] クラスC β-ラクタマーゼの構造・反応機構・耐性化メカニズム2012

    • Author(s)
      額賀路嘉
    • Organizer
      シンポジウム;βラクタマーゼ学: 構造・活性からその特徴を再考する
    • Place of Presentation
      お台場、東京
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] Studies on the Inactivation of Class C beta-Lactamases by Aztreonam (ATM)2011

    • Author(s)
      M.Nukagal, C.R.Bethel, S.M.Drawz, R.A.Bonomo
    • Organizer
      51th Interscience Conference on Antimicrobial Agents and Chemotherapy (ICAAC) Sept 17-20, Chicago, IL, USA
    • Place of Presentation
      Chicago, IL, USA
    • Year and Date
      2011-09-17
    • Related Report
      2011 Annual Research Report
  • [Presentation] Structure-function studies of PenA β-lactamase : insights into single amino acid substitutions that mediate ceftazidime (TAZ) resistance in Burkholderia pseudomallei (Bp)2011

    • Author(s)
      K.M.Papp-Wallace, M.Nukaga, D.A.Rholl, H.P.Schweizer, M.Taracila, R.A.Bonomo
    • Organizer
      51th Interscience Conference on Antimicrobial Agents and Chemotherapy (ICAAC) Sept 17-20, Chicago, IL, USA
    • Place of Presentation
      Chicago, IL, USA
    • Year and Date
      2011-09-17
    • Related Report
      2011 Annual Research Report
  • [Presentation] Structure-function studies of PenAβ-lactamase : insights into single amino acid substitutions that mediate ceftazidime (TAZ) resistance in Burkholderia pseudomallei (Bp)2011

    • Author(s)
      K. M. Papp-Wallace, M. Nukaga, D.A. Rholl, H. P. Schweizer, M. Taracila, R. A. Bonomo
    • Organizer
      51th Interscience Conference on Antimicro- bial Agents and Chemotherapy (ICAAC) Sept 17–20
    • Place of Presentation
      Chicago, IL, USA
    • Related Report
      2013 Final Research Report
  • [Presentation] Studies on the Inactiva- tion of Class C beta-Lactamases by Aztre- onam (ATM)2011

    • Author(s)
      M. Nukaga, C. R. Bethel, S. M. Drawz, R. A. Bonomo
    • Organizer
      51th Interscience Conference on Antimicrobial Agents and Chemotherapy (ICAAC) Sept 17–20
    • Place of Presentation
      Chicago, IL, USA
    • Related Report
      2013 Final Research Report
  • [Presentation] 14員環マクロライド抗生物質が核質タンパク性因子の細胞内動態に及ぼす影響2011

    • Author(s)
      懸川友人、古庄諭美、額賀路嘉、小澤美香、小嶋文良
    • Organizer
      第18回マクロライド新作用研究会
    • Place of Presentation
      北里大学白金キャンパス薬学部コンベンションホール
    • Related Report
      2011 Annual Research Report
  • [Presentation] Studies on the Inactivation of Class C beta-Lactamases by Carbapenems : Panipenem and P992010

    • Author(s)
      NUKAGA Michiyoshi
    • Organizer
      50th Interscience Conference on Antimicrobial Agents and Chemotherapy
    • Place of Presentation
      Boston, MA, USA
    • Year and Date
      2010-09-13
    • Related Report
      2010 Annual Research Report
  • [Presentation] Studies on the Inactivation of Class C beta-Lactamases by Carbapen- ems : Panipenem and P992010

    • Author(s)
      M. Nukaga, C. R. Bethel, S. Drawz, R. A. Bonomo
    • Organizer
      50th Inter- science Conference on Antimicrobial Agents and Chemotherapy (ICAAC), Sept. 12–15
    • Place of Presentation
      Boston, MA, USA
    • Related Report
      2013 Final Research Report

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Published: 2010-08-23   Modified: 2019-07-29  

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