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Identification and functional analysis of esophageal cancer-related genes by pull-down method using biotin-labeled miRNA

Research Project

Project/Area Number 22591433
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field General surgery
Research InstitutionOkayama University

Principal Investigator

ITO Sachio  岡山大学, 大学院・医歯薬学総合研究科, 助教 (30335624)

Co-Investigator(Kenkyū-buntansha) OKA Takashi  岡山大学, 大学院・医歯薬学総合研究科, 助教 (50160651)
OUCHIDA Mamoru  岡山大学, 大学院・医歯薬学総合研究科, 准教授 (80213635)
Project Period (FY) 2010 – 2012
Project Status Completed (Fiscal Year 2012)
Budget Amount *help
¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2012: ¥650,000 (Direct Cost: ¥500,000、Indirect Cost: ¥150,000)
Fiscal Year 2011: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2010: ¥3,120,000 (Direct Cost: ¥2,400,000、Indirect Cost: ¥720,000)
Keywords食道癌 / miRNA / microRNA / pull-down assay / 癌
Research Abstract

In order to identify possible predictive markers, We performed the identification of miRNA related to the degree of differentiation-grade and malignancy by the profiling of esophageal cancer cell lines and esophageal cancer clinical specimens. In poorly differentiated cells, miR-29a and let-7b were overexpressed. We identified target genes of these miRNAs using in vitro pull-down method, and found some candidates of target genes related to tumor suppressor and apoptosis. Our results suggest that these miRNAs are involved in esophageal cancer progression.

Report

(4 results)
  • 2012 Annual Research Report   Final Research Report ( PDF )
  • 2011 Annual Research Report
  • 2010 Annual Research Report
  • Research Products

    (23 results)

All 2012 2011 2010 Other

All Journal Article (3 results) (of which Peer Reviewed: 3 results) Presentation (18 results) Remarks (1 results) Patent(Industrial Property Rights) (1 results)

  • [Journal Article] Novel direct targets of miR-19a identified in breast cancer cells by a quantitative proteomic approach2012

    • Author(s)
      Ouchida M, Kanzaki H, Ito S, Hanafusa H, Jitsumori Y, Tamaru S, Shimizu K
    • Journal Title

      PLoS One

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] MicroRNA-21 correlates with tumorigenesis in malignant peripheral nerve sheath tumor (MPNST) via programmed cell death protein 4 (PDCD4)2012

    • Author(s)
      Itani S, Kunisada T, Morimoto Y, Yoshida A, Sasaki T, Ito S, Ouchida M, Sugihara S, Shimizu K, Ozaki T
    • Journal Title

      J Cancer Res Clin Oncol

      Pages: 1501-9

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Identification of direct targets for the miR-17-92 cluster by proteomic analysis2011

    • Author(s)
      Kanzaki H, Ito S, Hanafusa H, Jitsumori Y, Tamaru S, Shimizu K, Ouchida M
    • Journal Title

      Proteomics

      Pages: 3531-9

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Presentation] Identification of direct targets of microRNA-29a in esophageal cancer cells2012

    • Author(s)
      伊藤佐智夫、花房裕子、山本久美子、大内田守
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡
    • Related Report
      2012 Final Research Report
  • [Presentation] Novel direct targets of miR-19a identified in breast cancer cells by a quantitative proteomic approach2012

    • Author(s)
      大内田守、神崎浩孝、伊藤佐智夫、実盛好美、花房裕子、田丸聖治、清水憲ニ
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡
    • Related Report
      2012 Final Research Report
  • [Presentation] Search and identification of target genes for miR-19a2012

    • Author(s)
      山本久美子、伊藤佐智夫、花房裕子、大内田守
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡
    • Related Report
      2012 Final Research Report
  • [Presentation] Identification of target genes for miR-19a by in vitro pull-down method2012

    • Author(s)
      Kumiko YAMAMOTO, Sachio ITO, Hiroko HANAFUSA and Mamoru OUCHIDA
    • Organizer
      第71回日本癌学会学術総会
    • Place of Presentation
      札幌
    • Related Report
      2012 Final Research Report
  • [Presentation] identification and Direct Targets of MicroRNA-29a in Esophageal Cancer Cells.2012

    • Author(s)
      伊藤佐智夫
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡国際会議場
    • Related Report
      2012 Annual Research Report
  • [Presentation] Identification of direct target of MicroRNA-29a in Esophageal squamous cell carcinoma2011

    • Author(s)
      伊藤佐智夫
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2011-12-14
    • Related Report
      2011 Annual Research Report
  • [Presentation] Proteomic analysis of target genes of miR-17-92 cluster in lung cancer2011

    • Author(s)
      大内田守
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2011-12-14
    • Related Report
      2011 Annual Research Report
  • [Presentation] Identification and functional analysis of miR-19a target genes in lung cancer2011

    • Author(s)
      山本久美子
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2011-12-14
    • Related Report
      2011 Annual Research Report
  • [Presentation] Identification of direct targets of microRNA-29a in Esophageal squamous cell carcinoma2011

    • Author(s)
      Ito S, Hanafusa H, Ouchida M, Shimizu K
    • Organizer
      第34回分子生物学会
    • Place of Presentation
      横浜
    • Related Report
      2012 Final Research Report
  • [Presentation] Proteomic analysis of target genes of miR-92-1 in lung cancer2011

    • Author(s)
      Ouchida M, Kanzaki H, Ito S, Yamamoto K, Tamura S and Kenji Shimizu K
    • Organizer
      第34回分子生物学会
    • Place of Presentation
      横浜
    • Related Report
      2012 Final Research Report
  • [Presentation] Identification and functional analysis of miR-19a target genes in lung cancers2011

    • Author(s)
      Yamamoto K, Ouchida M, Ito S, Hanafusa H and Kenji S
    • Organizer
      第34回分子生物学会
    • Place of Presentation
      横浜
    • Related Report
      2012 Final Research Report
  • [Presentation] 肺癌における標識microRNAを用いた標的遺伝子の同定2010

    • Author(s)
      伊藤佐智夫
    • Organizer
      第69回日本癌学会学術総会
    • Place of Presentation
      大阪国際会議場
    • Year and Date
      2010-09-22
    • Related Report
      2010 Annual Research Report
  • [Presentation] Identification of true targets of microRNA-183 in lung cancer cells using labeled ds-miRNA in vitro pull-down assay2010

    • Author(s)
      伊藤佐智夫
    • Organizer
      第69回日本癌学会学術総会
    • Place of Presentation
      大阪国際会議場
    • Year and Date
      2010-09-22
    • Related Report
      2010 Annual Research Report
  • [Presentation] Identification of true targets of miRNA-183 in lung cancers using labeled ds-miRNA in vitro pull-down assay2010

    • Author(s)
      Sachio ITO, Hanafusa H, Mamoru OUCHIDA, and Kenji SHIMIZU
    • Organizer
      第33回分子生物学会
    • Place of Presentation
      神戸
    • Related Report
      2012 Final Research Report
  • [Presentation] プロテオーム解析による癌細胞でのmiR-17-92 clusterの新規標的タンパク質の同定2010

    • Author(s)
      Mamoru OUCHIDA, Hirotaka KANZAKI, Sachio ITO, Kumiko Yamamoto, Seiji Tamaru and Kenji SHIMIZU
    • Organizer
      第33回日本分子生物学会
    • Place of Presentation
      神戸
    • Related Report
      2012 Final Research Report
  • [Presentation] 肺癌における標識microRNA-183を用いた標識遺伝子の同定2010

    • Author(s)
      伊藤佐智夫、大内田守、清水憲二
    • Organizer
      第69回日本癌学会学術総会
    • Place of Presentation
      大阪
    • Related Report
      2012 Final Research Report
  • [Presentation] 癌細胞におけるmiR-17-92 clusterの新規標的タンパク質のプロテオーム解析2010

    • Author(s)
      大内田守、神崎浩孝、伊藤佐智夫、清水憲二
    • Organizer
      第69回日本癌学会学術総会
    • Place of Presentation
      大阪
    • Related Report
      2012 Final Research Report
  • [Presentation] Identification of novel direct target of miR-19a in MCF-7 breast cancer cell2010

    • Author(s)
      Hirotaka KANZAKI, Mamoru OUCHIDA, Sachio ITO, Seiji TAMARU, Hiroko HANAFUSA, Yoshimi JITSUMORI, Takashi OKA and Kenji SHIMIZU
    • Organizer
      The AACR 101st Annual Meeting 2010
    • Place of Presentation
      Washington, DC.(USA)
    • Related Report
      2012 Final Research Report
  • [Remarks]

    • URL

      http://molgenet.med.okayama-u.ac.jp/Molecular_Genetics/Welcome.html

    • Related Report
      2012 Final Research Report
  • [Patent(Industrial Property Rights)] microRNA標的遺伝子検出用キット及びmicroRNA標的遺伝子の検出方法2010

    • Inventor(s)
      伊藤佐智夫
    • Industrial Property Rights Holder
      岡山大学
    • Industrial Property Number
      2010-137924
    • Filing Date
      2010-06-17
    • Related Report
      2010 Annual Research Report

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Published: 2010-08-23   Modified: 2019-07-29  

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