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Development of the general tags for formation of hetero-complex

Research Project

Project/Area Number 22657028
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeSingle-year Grants
Research Field Structural biochemistry
Research InstitutionHokkaido University

Principal Investigator

YAO Min  北海道大学, 大学院・先端生命科学研究院, 准教授 (40311518)

Project Period (FY) 2010 – 2011
Project Status Completed (Fiscal Year 2011)
Budget Amount *help
¥3,520,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥420,000)
Fiscal Year 2011: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2010: ¥1,700,000 (Direct Cost: ¥1,700,000)
KeywordsX線結晶解析 / 蛋白質工学 / 遺伝子工学 / タグ / ヘテロ複合体 / 多量体形 / バイオインフォマティクス
Research Abstract

In order to develop the general tags, HA-tags which can control and promote the formation of a hetero complex, we first searched candidate peptides of the tag from the protein crystal structures(more than the 3A resolution) from PDB in silico. Finally two kinds of hetero-dimer tag(2HA-tag) were selected. We constructed model proteins with 2HA-tag fusion at the N or C terminal, and over-expressed them in Escherichia coli. The experiments of hetero-dimer formation are in progress.

Report

(3 results)
  • 2011 Annual Research Report   Final Research Report ( PDF )
  • 2010 Annual Research Report
  • Research Products

    (8 results)

All 2011 2010 Other

All Journal Article (6 results) (of which Peer Reviewed: 6 results) Remarks (2 results)

  • [Journal Article] Crystallization and preliminary X-ray crystallographic analysis of eIF5BΔN and the eIF5BΔN-eIF1AΔN complex2011

    • Author(s)
      Aiping Zheng, Reo Yamamoto, Masaaki Sokabe, Isao Tanaka and Min Yao
    • Journal Title

      Acta Cryst.

      Volume: F67 Issue: 6 Pages: 730-733

    • DOI

      10.1107/s1744309111015910

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Roll : a new algorithm for the detection of protein pockets and cavities with a rolling probe sphere2010

    • Author(s)
      Jian Yu, Yong Zhou, Isao Tanaka and Min Yao
    • Journal Title

      Bioinformatics

      Volume: 26 Issue: 1 Pages: 46-52

    • DOI

      10.1093/bioinformatics/btp599

    • NAID

      120002695775

    • Related Report
      2011 Final Research Report 2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Preliminary X-ray crystallographic study of the receptor-binding domain of the D/C mosaic neurotoxin from Clostridium botulinum2010

    • Author(s)
      Nipawan Nuemket, Yoshikazu Tanaka, Kentaro Tsukamoto, Takao Tsuji, Keiji Nakamura, Shunji Kozaki, Min Yao and Isao Tanaka
    • Journal Title

      Acta Cryst.

      Volume: F66 Issue: 5 Pages: 608-610

    • DOI

      10.1107/s1744309110012182

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Crystallization and preliminary X-ray studies of azoreductases from Bacillus sp. B292010

    • Author(s)
      Daiki Ogata, Toshihiko Ooi, Takaaki Fujiwara, Seiichi Taguchi, Isao Tanaka and Min Yao
    • Journal Title

      Acta Cryst.

      Volume: F66 Issue: 5 Pages: 503-505

    • DOI

      10.1107/s1744309110007785

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Crystallization and preliminary X-ray studies of azoreductases from Bacillus sp.B292010

    • Author(s)
      D.Ogata
    • Journal Title

      Acta Crystallographica Section F

      Volume: F66 Pages: 503-505

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Preliminary X-ray crystallographic study of the receptor-binding domain of the D/C mosaic neurotoxin from Clostridium botulinum2010

    • Author(s)
      N.Nuemket
    • Journal Title

      Acta Crystallographica Section F

      Volume: F66 Pages: 608-610

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Remarks]

    • URL

      http://altair.sci.hokudai.ac.jp/g6/index.html

    • Related Report
      2011 Final Research Report
  • [Remarks]

    • URL

      http://altair.sci.hokudai.ac.jp/g6/Research/POCASA_e.html

    • Related Report
      2010 Annual Research Report

URL: 

Published: 2010-08-23   Modified: 2016-04-21  

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