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Yeast geneticapproach for endoplasmic-reticulum morphogenesis

Research Project

Project/Area Number 22657030
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeSingle-year Grants
Research Field Structural biochemistry
Research InstitutionNara Institute of Science and Technology

Principal Investigator

KIMATA Yukio  奈良先端科学技術大学院大学, バイオサイエンス研究科, 准教授 (60263448)

Project Period (FY) 2010 – 2011
Project Status Completed (Fiscal Year 2011)
Budget Amount *help
¥3,420,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥420,000)
Fiscal Year 2011: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2010: ¥1,600,000 (Direct Cost: ¥1,600,000)
Keywords酵母 / 細胞小器官 / オルガネラ / 小胞体 / ストレス応答 / 蛋白質 / プロテオーム / ストレス / 微生物 / 細胞形態 / 変異体 / 生細胞観察
Research Abstract

Dysfunction of the endoplasmic reticulum (ER), namely ER stress, activates an ER-located transmembrane protein Ire1. In the present study, we have noticed interaction between Ire1 and an ER-located zinc-ion transporter Zrg17 in yeast cells. Zrg17 was highly phosphorylated in IRE1 cells but not in ire1Δcells cultured in ER-stress conditions. We propose that Ire1 activated through zinc deficiency directly phosphorylates and stabilizes Zrg17 for efficient incorporation of zinc ion into the ER.

Report

(3 results)
  • 2011 Annual Research Report   Final Research Report ( PDF )
  • 2010 Annual Research Report
  • Research Products

    (33 results)

All 2013 2012 2011 2010 Other

All Journal Article (12 results) (of which Peer Reviewed: 11 results) Presentation (20 results) (of which Invited: 2 results) Remarks (1 results)

  • [Journal Article] Zinc depletion activates the endoplasmic reticulum-stress sensor Ire1 via pleiotropic mechanisms2013

    • Author(s)
      Nguyen TSL, Kohno K, Kimata Y
    • Journal Title

      Biosci. Biotechnol. Biochem

    • NAID

      10031184709

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] BiP-bound and nonclustered mode of Ire1 evokes a weak but sustained unfolded protein response2013

    • Author(s)
      Ishiwata-Kimata Y, Promlek T, Kohno K, Kimata Y
    • Journal Title

      Genes Cells

      Volume: Vol. 18 Pages: 288-301

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Zinc depletion activates the endoplasmic reticulum-stress sensor Ire1 via pleiotropic mechanisms2013

    • Author(s)
      Nguyen TSL
    • Journal Title

      Biosci. Biotechnol. Biochem.

      Volume: 印刷中

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A BiP-bound and non-clustered mode of Irel evokes a weak but sustained unfolded protein response.2013

    • Author(s)
      Ishiwata-Kimata, Yuki
    • Journal Title

      Genes Ceils

      Volume: 18 Issue: 4 Pages: 288-301

    • DOI

      10.1111/gtc.12035

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Membrane aberrancy and unfolded aroteins activate the endoplasmic reticulum-stress sensor Ire1 by different manners2011

    • Author(s)
      Promlek T, Ishiwata-Kimata Y, Shido M, Sakuramoto M, Kohno K, Kimata Y
    • Journal Title

      Mol. Biol. Cell

      Volume: Vol.22 Pages: 3520-3532

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Translational pausing ensures membrane targeting and cytoplasmic splicing of XBP1u mRNA2011

    • Author(s)
      Yanagitani K, Kimata Y, Kadokura H, Kohno K
    • Journal Title

      Science

      Volume: Vol.331 Pages: 586-589

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Experimental approaches for elucidation of stress-sensing mechanisms of the Ire1 family proteins2011

    • Author(s)
      Oikawa D, Kimata Y
    • Journal Title

      Methods Enzymol

      Volume: Vol.490 Pages: 195-216

    • Related Report
      2011 Final Research Report
  • [Journal Article] Endoplasmic reticulum stress-sensing mechanisms in yeast and mammalian cells2011

    • Author(s)
      Kimata Y, Kohno K
    • Journal Title

      Curr. Opp. Cell. Biol

      Volume: Vol.23 Pages: 135-142

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Membrane aberrancy and unfolded proteins activate the endoplasmic reticulum-stress sensor Ire1 by different manners2011

    • Author(s)
      Promlek T
    • Journal Title

      Mol. Biol. Cell

      Volume: 22 Issue: 18 Pages: 3520-3532

    • DOI

      10.1091/mbc.e11-04-0295

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Translational pausing ensures membrane targeting and cytoplasmic splicing of XBP1u mRNA2011

    • Author(s)
      Yanagitani K
    • Journal Title

      Science

      Volume: 331 Issue: 6017 Pages: 586-589

    • DOI

      10.1126/science.1197142

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Endoplasmic reticulum stress-sensing mechanisms in yeast and mammalian cells2011

    • Author(s)
      Kimata Y
    • Journal Title

      Curr. Opp. Cell. Biol.

      Volume: 23 Issue: 2 Pages: 35-142

    • DOI

      10.1016/j.ceb.2010.10.008

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A novel ER J-protein DNAJB12 accelerates ER-associated degradation of membrane proteins including CFTR2010

    • Author(s)
      Yamamoto YH, Kimura T, Momohara S, Takeuchi M, Tani T, Kimata Y, Kadokura H, Kohno K
    • Journal Title

      Cell Struct. Funct

      Volume: Vol.35 Pages: 107-116

    • NAID

      130004137557

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Presentation] エタノールによる出芽酵母の小胞体ストレス応答2013

    • Author(s)
      宮川賢一、河野 憲二、木俣 行雄
    • Organizer
      日本農芸化学会 2013 年度大会
    • Place of Presentation
      仙台
    • Year and Date
      2013-03-27
    • Related Report
      2011 Final Research Report
  • [Presentation] 小胞体ストレスセンサーIre1 による亜鉛トランスポーターZrg17の直接的制御2012

    • Author(s)
      堂道京子、Nguyen Sy Le Thanh、堤智明、河野憲二、木俣行雄
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡
    • Year and Date
      2012-12-13
    • Related Report
      2011 Final Research Report
  • [Presentation] Direct regulation of a zinc-ion transporter Zrg17 by the ER-stress sensor Ire1.2012

    • Author(s)
      Nuyen SLT, Dodo K, Tsutsumi T, Ishiwata-Kimata Y, Kohno K, Kimata Y
    • Organizer
      EMBO Conference Series " The physiology of the endoplasmic reticulum (ER): Function and dysfunction"
    • Place of Presentation
      スペイン(ジローナ)
    • Year and Date
      2012-10-16
    • Related Report
      2011 Final Research Report
  • [Presentation] 小胞体ストレスセンサーIre1 による亜鉛トランスポーターZrg17の直接的制御2012

    • Author(s)
      堂道京子、堤智明、Nguyen Sy Le Thanh、河野憲二、木俣行雄
    • Organizer
      酵母遺伝学フォーラム第45回研究報告会
    • Place of Presentation
      宇治
    • Year and Date
      2012-09-04
    • Related Report
      2011 Final Research Report
  • [Presentation] Membrane aberrancy and unfolded proteins activate the endoplasmic reticulum-stress sensor Ire1 by different manners.2012

    • Author(s)
      Kimata Y
    • Organizer
      Joint Meeting of The 45th Annual Meeting of the Japanese Society of Developmental Biologists & The 64th Annual Meeting of the Japan Society for Cell Biology: Symposium "Frontiers in intracellular transport and organelle biology"
    • Place of Presentation
      神戸
    • Year and Date
      2012-05-29
    • Related Report
      2011 Final Research Report
  • [Presentation] Unfolded-protein recognition by Ire1 upon endoplasmic-reticulum stress.2011

    • Author(s)
      Kimata Y
    • Organizer
      The 2nd International Conference on Pharmacy and Advanced Pharmaceutical Sciences
    • Place of Presentation
      インドネシア(ジョグジャカルタ)
    • Year and Date
      2011-07-19
    • Related Report
      2011 Final Research Report
  • [Presentation] 小胞体ストレスセンサーIre1 の集合メカニズム2010

    • Author(s)
      滝沢健、木俣有紀、河野憲二、木俣行雄
    • Organizer
      BMB2010
    • Place of Presentation
      神戸
    • Year and Date
      2010-12-09
    • Related Report
      2011 Final Research Report
  • [Presentation] 哺乳動物 IRE1αの高次ホモ多量体化2010

    • Author(s)
      平岡雄一郎、宗像丈夫、中村大祐、河野憲二、木俣行雄
    • Organizer
      BMB2010
    • Place of Presentation
      神戸
    • Year and Date
      2010-12-09
    • Related Report
      2011 Final Research Report
  • [Presentation] Unfolded Protein Responseとは何か?2010

    • Author(s)
      木俣行雄
    • Organizer
      第179回酵母細胞研究会
    • Place of Presentation
      東京
    • Year and Date
      2010-12-03
    • Related Report
      2011 Final Research Report
  • [Presentation] New activation modes of the endoplasmic reticulum-stress sensor Ire1.2010

    • Author(s)
      Kimata-Ishiwata Y, Shido M, Kohno K, Kimata Y
    • Organizer
      The 3rd International Symposium on Protein Community
    • Place of Presentation
      奈良
    • Year and Date
      2010-09-14
    • Related Report
      2011 Final Research Report
  • [Presentation] Unfolded-protein interaction with stress sensor Ire1.2010

    • Author(s)
      Promlek T, Kimata Y, Kohno K
    • Organizer
      The 3rd International Symposium on Protein Community
    • Place of Presentation
      奈良
    • Year and Date
      2010-09-14
    • Related Report
      2011 Final Research Report
  • [Presentation] 小胞体ストレスセンサーIre1 分子同士の出会いは偶然では無い?2010

    • Author(s)
      滝沢健、木俣有紀、河野憲二、木俣行雄
    • Organizer
      酵母遺伝学フォーラム第43回研究報告会
    • Place of Presentation
      奈良
    • Year and Date
      2010-09-10
    • Related Report
      2011 Final Research Report
  • [Presentation] いかなるストレスがUnfolded Protein Response を引き起こすのか?2010

    • Author(s)
      木俣有紀、Thanyarat Promlek、河野憲二、木俣行雄
    • Organizer
      酵母遺伝学フォーラム第43回研究報告会
    • Place of Presentation
      奈良
    • Year and Date
      2010-09-09
    • Related Report
      2011 Final Research Report
  • [Presentation] The unfolded protein response not by unfolded proteins.2010

    • Author(s)
      Kimata Y
    • Organizer
      Cold Spring Harbor Laboratory Meeting "Molecular Chaperones and Stress response"
    • Place of Presentation
      アメリカ合衆国(ニューヨーク)
    • Year and Date
      2010-05-05
    • Related Report
      2011 Final Research Report
  • [Presentation] エタノールによる出芽酵母の小胞体ストレス応答

    • Author(s)
      宮川賢一
    • Organizer
      日本農芸化学会2013年度大会
    • Place of Presentation
      宮城県仙台市
    • Related Report
      2011 Annual Research Report
  • [Presentation] 小胞体ストレスセンサーIre1による亜鉛トランスポーターZrg17の直接的制御

    • Author(s)
      堂道京子
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      福岡県博多市
    • Related Report
      2011 Annual Research Report
  • [Presentation] Direct regulation of a zinc-ion transporter Zrg17 by the ER-stress sensor Ire1

    • Author(s)
      Nuyen SLT
    • Organizer
      EMBO Conference
    • Place of Presentation
      スペイン ジローナ市
    • Related Report
      2011 Annual Research Report
  • [Presentation] 小胞体ストレスセンサーIre1による亜鉛トランスポーターZrg17の直接的制御

    • Author(s)
      堂道京子
    • Organizer
      酵母遺伝学フォーラム第45回研究報告会
    • Place of Presentation
      京都府宇治市
    • Related Report
      2011 Annual Research Report
  • [Presentation] Membrane aberrancy and unfolded proteins activate the endoplasmic reticulum-stress sensor Ire1 by different manners

    • Author(s)
      Kimata Y
    • Organizer
      第64回日本細胞生物学会大会
    • Place of Presentation
      兵庫県神戸市
    • Related Report
      2011 Annual Research Report
    • Invited
  • [Presentation] Unfolded-protein recognition by Ire1 upon endoplasmic-reticulum stress

    • Author(s)
      Kimata Y
    • Organizer
      The 2nd International Conference on Pharmacy and Advanced Pharmaceutical Sciences
    • Place of Presentation
      インドネシア ジョグジャカルタ市
    • Related Report
      2011 Annual Research Report
    • Invited
  • [Remarks] ホームページアドレス

    • URL

      http://bsw3.naist.jp/kouno/kouno.html

    • Related Report
      2011 Final Research Report

URL: 

Published: 2010-08-23   Modified: 2016-04-21  

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